Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G25330.1 | Thale cress | nucleus | 52.91 | 74.75 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 27.89 | 60.26 |
| KRH52412 | Soybean | nucleus | 94.08 | 54.85 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 83.86 | 48.78 |
| Solyc06g017970.2.1 | Tomato | nucleus | 75.79 | 43.88 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 74.67 | 43.67 |
| CDX76975 | Canola | nucleus, plastid | 72.93 | 43.62 |
| CDY11532 | Canola | nucleus, plastid | 73.34 | 43.46 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 73.85 | 43.45 |
| Bra034251.1-P | Field mustard | nucleus | 72.93 | 43.35 |
| CDY58924 | Canola | nucleus, plastid | 73.24 | 43.35 |
| CDY35362 | Canola | nucleus, plastid | 72.83 | 43.29 |
| EES07147 | Sorghum | nucleus, plastid | 60.47 | 35.56 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 60.16 | 35.44 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 59.96 | 35.43 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 59.86 | 35.26 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 59.45 | 34.81 |
| Zm00001d051075_P002 | Maize | nucleus | 58.94 | 34.08 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 42.8 | 31.89 |
| KRG98484 | Soybean | cytosol | 2.55 | 22.52 |
| KRH71763 | Soybean | cytosol | 5.21 | 19.69 |
| KRG89898 | Soybean | cytosol | 7.05 | 18.25 |
| KRH17929 | Soybean | cytosol | 8.17 | 18.06 |
| KRG90150 | Soybean | cytosol | 3.78 | 17.45 |
| KRH32941 | Soybean | cytosol | 5.11 | 17.42 |
| KRH71764 | Soybean | cytosol | 5.62 | 15.28 |
| KRG96333 | Soybean | cytosol | 6.33 | 15.12 |
| KRH32747 | Soybean | cytosol | 5.52 | 14.75 |
| KRH46376 | Soybean | cytosol | 5.01 | 14.54 |
| KRH68070 | Soybean | cytosol | 5.52 | 14.32 |
| KRG96334 | Soybean | cytosol | 5.01 | 14.08 |
| KRH71762 | Soybean | cytosol | 2.66 | 13.68 |
| KRG96335 | Soybean | cytosol | 5.21 | 13.46 |
| KRG90152 | Soybean | cytosol | 9.6 | 11.99 |
| KRH33402 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 13.79 | 11.83 |
| KRH14719 | Soybean | nucleus | 13.48 | 11.81 |
| KRH73403 | Soybean | nucleus | 13.38 | 11.72 |
| KRG98483 | Soybean | cytosol | 2.96 | 11.69 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 8.38 | 9.75 |
| KRH34524 | Soybean | nucleus | 10.21 | 8.76 |
| KRH31732 | Soybean | nucleus | 10.11 | 8.69 |
| KRG92287 | Soybean | nucleus | 10.01 | 8.6 |
| KRG89895 | Soybean | nucleus | 6.44 | 8.41 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 10.11 | 8.06 |
| KRH17931 | Soybean | mitochondrion, nucleus | 5.31 | 7.68 |
| KRH33457 | Soybean | cytosol | 1.12 | 7.53 |
| KRH16103 | Soybean | nucleus | 7.46 | 6.76 |
| KRH04994 | Soybean | nucleus | 7.35 | 6.66 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 7.25 | 6.48 |
| KRH52561 | Soybean | cytosol | 7.35 | 6.45 |
| KRH61744 | Soybean | cytosol | 0.0 | 0.0 |
| KRG90154 | Soybean | cytosol | 0.0 | 0.0 |
| Os02t0613400-01 | Rice | extracellular | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02002186 | EnsemblPlants:KRH61745 | EnsemblPlantsGene:GLYMA_04G0655001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR24007 |
| PANTHER:PTHR24007:SF6 | PFAM:PF00917 | PFscan:PS50144 | ProteinID:KRH61745 | ProteinID:KRH61745.1 | SEG:seg |
| SMART:SM00061 | SUPFAM:SSF49599 | UniParc:UPI0006EDED79 | UniProt:A0A0R0K4X6 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr4:-:5445707..5449675
Molecular Weight (calculated)
108411.0 Da
IEP (calculated)
5.244
GRAVY (calculated)
-0.270
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQASSEAVP SLSSAPSFTE AATSSTSSAA AAEDLAVGSR DGGGGAQETV AVDRRGEYSA VCRWTVHNFP RIKARALWSK YFEVGGYDCR LLIYPKGDSQ
101: ALPGYISIYL QIMDPRGTSS SKWDCFASYR LAIVNLADDS KTIHRDSWHR FSSKKKSHGW CDFTPSNTVF DPKLGYLFNT DSVLITADIL ILNESVNFTR
201: DNNEVQSSSS SSSSAMTSSV VASPVSDVSS GKFTWKVHNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SSVNGVEYLS MCLESKDTDK SVVLSDRSCW
301: CLFRMSVLNQ KPGSNHMHRD SYGRFAADNK SGDNTSLGWN DYMKMLDFID ADSGFLVDDT AVFSTSFHVI KEFSSFSKNG AVIAGRSGSG ARKSDGHVGK
401: FTWRIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRNTSSDWS CFVSHRLSVV NQRMEDKSVT KESQNRYSKA
501: AKDWGWREFV TLTSLFDQDS GFLVQDTVIF SAEVLILKET SIMQDITEND SELSSSGSPV DKRSSFTWKV ENFLSFKEIM ETRKIFSKFF QAGGCELRIG
601: RCSITQILSP AFYSLPVVVV NFYFFYSLIE RLCFHDPGVY ESFDTICIYL ESDQAVGSDP DKNFWVRYRM AVVNQKNPAK TVWKESSICT KTWNNSVLQF
701: MKVSDMLEAD AGFLVRDTVV FVCEILDCCP WFEFSDLEVL ASEDDQDALT TDPDELIDSE DSEGISGDEE DIFRNLLSRA GFHLTYGDNP SQPQVTLREK
801: LLMDAGAIAG FLTGLRVYLD DPAKVKRLLL PTKLSGSCDG KKATKADESS PSLMNLLMGV KVLQQAIIDL LLDIMVECCQ PSEVGPVADS VDACSKPSPN
901: GSGAASPLEC ERENGAMESA RVPVCERLDS VVQESSNASA VQSSDLKGNG IQEKALPGQP ICPPETSATA SENASLRSK
101: ALPGYISIYL QIMDPRGTSS SKWDCFASYR LAIVNLADDS KTIHRDSWHR FSSKKKSHGW CDFTPSNTVF DPKLGYLFNT DSVLITADIL ILNESVNFTR
201: DNNEVQSSSS SSSSAMTSSV VASPVSDVSS GKFTWKVHNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SSVNGVEYLS MCLESKDTDK SVVLSDRSCW
301: CLFRMSVLNQ KPGSNHMHRD SYGRFAADNK SGDNTSLGWN DYMKMLDFID ADSGFLVDDT AVFSTSFHVI KEFSSFSKNG AVIAGRSGSG ARKSDGHVGK
401: FTWRIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRNTSSDWS CFVSHRLSVV NQRMEDKSVT KESQNRYSKA
501: AKDWGWREFV TLTSLFDQDS GFLVQDTVIF SAEVLILKET SIMQDITEND SELSSSGSPV DKRSSFTWKV ENFLSFKEIM ETRKIFSKFF QAGGCELRIG
601: RCSITQILSP AFYSLPVVVV NFYFFYSLIE RLCFHDPGVY ESFDTICIYL ESDQAVGSDP DKNFWVRYRM AVVNQKNPAK TVWKESSICT KTWNNSVLQF
701: MKVSDMLEAD AGFLVRDTVV FVCEILDCCP WFEFSDLEVL ASEDDQDALT TDPDELIDSE DSEGISGDEE DIFRNLLSRA GFHLTYGDNP SQPQVTLREK
801: LLMDAGAIAG FLTGLRVYLD DPAKVKRLLL PTKLSGSCDG KKATKADESS PSLMNLLMGV KVLQQAIIDL LLDIMVECCQ PSEVGPVADS VDACSKPSPN
901: GSGAASPLEC ERENGAMESA RVPVCERLDS VVQESSNASA VQSSDLKGNG IQEKALPGQP ICPPETSATA SENASLRSK
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.