Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11532 | Canola | nucleus, plastid | 99.16 | 99.88 |
| CDY58924 | Canola | nucleus, plastid | 97.96 | 98.55 |
| Bra034251.1-P | Field mustard | nucleus | 89.48 | 90.41 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 90.44 | 89.9 |
| AT2G25330.1 | Thale cress | nucleus | 35.22 | 84.56 |
| KRH61745 | Soybean | nucleus | 43.45 | 73.85 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 73.26 | 72.43 |
| KRH52412 | Soybean | nucleus | 72.36 | 71.71 |
| Solyc06g017970.2.1 | Tomato | nucleus | 70.13 | 69.01 |
| KRH61744 | Soybean | cytosol | 24.4 | 63.34 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 16.77 | 61.59 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 48.14 | 60.96 |
| Os02t0613400-01 | Rice | extracellular | 10.46 | 58.98 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 28.85 | 57.07 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 55.89 | 56.13 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 55.95 | 56.02 |
| EES07147 | Sorghum | nucleus, plastid | 55.89 | 55.86 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 55.77 | 55.84 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 55.53 | 55.26 |
| Zm00001d051075_P002 | Maize | nucleus | 55.47 | 54.52 |
| Bra009210.1-P | Field mustard | cytosol | 10.94 | 16.55 |
| Bra005900.1-P | Field mustard | cytosol | 10.94 | 16.32 |
| Bra034802.1-P | Field mustard | cytosol | 10.94 | 16.32 |
| Bra028727.1-P | Field mustard | cytosol | 11.12 | 16.26 |
| Bra038685.1-P | Field mustard | cytosol | 10.76 | 16.24 |
| Bra001426.1-P | Field mustard | cytosol | 10.16 | 15.2 |
| Bra023279.1-P | Field mustard | cytosol | 2.76 | 13.18 |
| Bra019603.1-P | Field mustard | cytosol | 6.43 | 10.43 |
| Bra033684.1-P | Field mustard | nucleus | 5.71 | 10.25 |
| Bra032518.1-P | Field mustard | nucleus | 6.07 | 10.16 |
| Bra041162.1-P | Field mustard | cytosol, nucleus, plastid | 1.2 | 10.05 |
| Bra015302.1-P | Field mustard | nucleus | 6.25 | 9.81 |
| Bra017972.1-P | Field mustard | cytosol | 5.95 | 9.52 |
| Bra010174.1-P | Field mustard | cytosol | 1.08 | 8.18 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | InterPro:ARM-type_fold | EnsemblPlantsGene:Bra007802 | EnsemblPlants:Bra007802.1 | EnsemblPlants:Bra007802.1-P |
| ncoils:Coil | InterPro:FANCD2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:IPR002083 | InterPro:IPR008974 | UniProt:M4CUA8 | InterPro:MATH/TRAF_dom | PFAM:PD936484 | PFAM:PF00917 |
| PFAM:PF14631 | PFscan:PS50144 | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 | SMART:SM00061 | SUPFAM:SSF48371 |
| SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0002542CA1 | SEG:seg | : | : |
Description
AT2G25320 (E=0.0) | LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT2G25330.1); Has 59993 Blast hits to 32072 proteins in 1426 species: Archae - 584; Bacteria - 5166; Metazoa - 31897; Fungi - 4070; Plants - 2329; Viruses - 207; Other Eukaryotes - 15740 (source: NCBI BLink).
Coordinates
chrA09:+:30946722..30952689
Molecular Weight (calculated)
186880.0 Da
IEP (calculated)
5.362
GRAVY (calculated)
-0.420
Length
1664 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKQSSSDAV SSSSSAIDLS HPPSSSSSEK PLCSSSISPA EDHQVGSSRD GSGGAQEIVA IDRRGEYTAV CRWTVENFTR VKAKALWSKY FDVGGYDCRL
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGTSSS RWDCFASYRL SIVNHVDESL TIHKDSWHRF SSKKKSHGWC DFTLNSSVLD PKMGFLFNND SLLITADILI
0201: LNESVSFSRD SNSDSGSLFK EPGPMPDVLS GKFTWKVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETDK TMASDRSCWC
0301: LFRMSALNQK PGCAHMHRDS YGRFAADNKN GDNTSLGWND YMKMSDFVNP ESGFLLDDKA VFSTSFHVIK EFSSFTKNGG LVLGRNNGNG SRKSDAHMGR
0401: FTWKIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRSSSDWSC FVSHRLSVVN QRLEEKSVTK ESQNRYSKAA
0501: KDWGWREFVT LTSLFDQDSG FLVQDTVVFS AEVLILKETS VTKDYVEAES ANSASQIDSS VKRSSFTWKV ENFLAFKEIM ETRKIFSKFF QAGGCELRIG
0601: VYESFDTICI YLESDQSAGT DVDNNFWVKY KMGILNQKNP AKSVWKESSI CTKTWNNSVL QFMKVSDMLE ADAGFLVRDT VVFVCEILDC CPWFEFSDLE
0701: VLASDDDQDA LTTDPDEIID SEESEGISGD EEDTFQDFLS QAGFHLTFGE NPSQPQVTLR EKLLMDAGAI AGFLTGLRVY LDDPTKVKRL LLPTKISCND
0801: RSKLTKSDES SPSLMNLLMG VKVLQQAIID LLLDIMVECC QPSEEEGSHS EPSLMDAKTD GCVASTSLES TRENGAAEPL QYLVDERFKS DADATTLSTS
0901: AVQGSGMNGI DMLEKALAIE PVSPPETYAR QSSDAPVQSK TKWPEQSEEL LGLIVNSLKT LDSAVPQGCP EPRRRPHSAQ KIALVLNRAP KHLQPDLVSL
1001: VPKLVEHSEH PLAAYALIER LQMPEAEPAL REPVYNALSQ LDCDSEVWEH ILLQSFELLS DSNGESLMAA IHFIFKTASQ CQHLPEAVRS VRERLKVLGS
1101: DVSVCVLEYL SKTVHSWAEI AEMILKDINC DDSLGGNFVT LPCGPFLIGE NETTSEMADL MDEHEFYANR QFCDVYILLE MLSISCLAVE ASQTFERAVA
1201: RGAIVAQSVA MVLEKRRVQG PNLSATSGDP VLEGEASDEQ AAEGIEFRGI LNLAETLAHS GDPQVRGFVK MLYTILFKWF PDQPFRVQML TRLVDRFTSR
1301: ASGSNELDLE LEVLAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKTEIQN LAKEKSAITQ KLSESEAANT RLKSEMKAET
1401: DRFTREKKDL VEQFRDVESQ LEWVRSERED EIAKLSSDKK SLLNRLHEAE TQLSLLKTRK HDELKKVGKE KTALTEKLKV TEAARKRFEE ELKRYATENV
1501: TREELRKSLE DEIRRLTQTL GQTQEEKREK EDQISRCEAY IDGMESKLQA CQQYIHTLES SLRDEISRHA PLYGANLDSL SMKELDTIAR IHEEGLRQIH
1601: ALQQRKGNGL PHGLPHGHTL YPTTPPQLPP TPIGLPPQIL PNGSGGHSNG HVNGSVRPWF SHHT
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGTSSS RWDCFASYRL SIVNHVDESL TIHKDSWHRF SSKKKSHGWC DFTLNSSVLD PKMGFLFNND SLLITADILI
0201: LNESVSFSRD SNSDSGSLFK EPGPMPDVLS GKFTWKVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETDK TMASDRSCWC
0301: LFRMSALNQK PGCAHMHRDS YGRFAADNKN GDNTSLGWND YMKMSDFVNP ESGFLLDDKA VFSTSFHVIK EFSSFTKNGG LVLGRNNGNG SRKSDAHMGR
0401: FTWKIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRSSSDWSC FVSHRLSVVN QRLEEKSVTK ESQNRYSKAA
0501: KDWGWREFVT LTSLFDQDSG FLVQDTVVFS AEVLILKETS VTKDYVEAES ANSASQIDSS VKRSSFTWKV ENFLAFKEIM ETRKIFSKFF QAGGCELRIG
0601: VYESFDTICI YLESDQSAGT DVDNNFWVKY KMGILNQKNP AKSVWKESSI CTKTWNNSVL QFMKVSDMLE ADAGFLVRDT VVFVCEILDC CPWFEFSDLE
0701: VLASDDDQDA LTTDPDEIID SEESEGISGD EEDTFQDFLS QAGFHLTFGE NPSQPQVTLR EKLLMDAGAI AGFLTGLRVY LDDPTKVKRL LLPTKISCND
0801: RSKLTKSDES SPSLMNLLMG VKVLQQAIID LLLDIMVECC QPSEEEGSHS EPSLMDAKTD GCVASTSLES TRENGAAEPL QYLVDERFKS DADATTLSTS
0901: AVQGSGMNGI DMLEKALAIE PVSPPETYAR QSSDAPVQSK TKWPEQSEEL LGLIVNSLKT LDSAVPQGCP EPRRRPHSAQ KIALVLNRAP KHLQPDLVSL
1001: VPKLVEHSEH PLAAYALIER LQMPEAEPAL REPVYNALSQ LDCDSEVWEH ILLQSFELLS DSNGESLMAA IHFIFKTASQ CQHLPEAVRS VRERLKVLGS
1101: DVSVCVLEYL SKTVHSWAEI AEMILKDINC DDSLGGNFVT LPCGPFLIGE NETTSEMADL MDEHEFYANR QFCDVYILLE MLSISCLAVE ASQTFERAVA
1201: RGAIVAQSVA MVLEKRRVQG PNLSATSGDP VLEGEASDEQ AAEGIEFRGI LNLAETLAHS GDPQVRGFVK MLYTILFKWF PDQPFRVQML TRLVDRFTSR
1301: ASGSNELDLE LEVLAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKTEIQN LAKEKSAITQ KLSESEAANT RLKSEMKAET
1401: DRFTREKKDL VEQFRDVESQ LEWVRSERED EIAKLSSDKK SLLNRLHEAE TQLSLLKTRK HDELKKVGKE KTALTEKLKV TEAARKRFEE ELKRYATENV
1501: TREELRKSLE DEIRRLTQTL GQTQEEKREK EDQISRCEAY IDGMESKLQA CQQYIHTLES SLRDEISRHA PLYGANLDSL SMKELDTIAR IHEEGLRQIH
1601: ALQQRKGNGL PHGLPHGHTL YPTTPPQLPP TPIGLPPQIL PNGSGGHSNG HVNGSVRPWF SHHT
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.