Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61744 | Soybean | cytosol | 36.99 | 96.88 |
| KRH61745 | Soybean | nucleus | 54.85 | 94.08 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 85.53 | 85.32 |
| Solyc06g017970.2.1 | Tomato | nucleus | 77.72 | 77.17 |
| AT2G25330.1 | Thale cress | nucleus | 30.91 | 74.89 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 72.54 | 72.76 |
| CDY11532 | Canola | nucleus, plastid | 71.47 | 72.64 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 71.71 | 72.36 |
| CDY58924 | Canola | nucleus, plastid | 71.17 | 72.25 |
| CDX76975 | Canola | nucleus, plastid | 70.04 | 71.84 |
| Bra034251.1-P | Field mustard | nucleus | 69.57 | 70.92 |
| CDY35362 | Canola | nucleus, plastid | 69.45 | 70.8 |
| Os02t0613400-01 | Rice | extracellular | 12.21 | 69.49 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 54.14 | 69.18 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 33.47 | 66.83 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 17.39 | 64.46 |
| EES07147 | Sorghum | nucleus, plastid | 61.41 | 61.92 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 60.69 | 61.5 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 60.69 | 61.31 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 60.57 | 61.19 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 60.57 | 60.83 |
| Zm00001d051075_P002 | Maize | nucleus | 60.21 | 59.72 |
| KRG98484 | Soybean | cytosol | 1.61 | 24.32 |
| KRH32941 | Soybean | cytosol | 3.63 | 21.25 |
| KRH71764 | Soybean | cytosol | 4.53 | 21.11 |
| KRH71763 | Soybean | cytosol | 3.22 | 20.85 |
| KRH46376 | Soybean | cytosol | 4.05 | 20.18 |
| KRG96334 | Soybean | cytosol | 4.17 | 20.11 |
| KRH32747 | Soybean | cytosol | 4.35 | 19.95 |
| KRG96333 | Soybean | cytosol | 4.76 | 19.51 |
| KRH68070 | Soybean | cytosol | 4.29 | 19.1 |
| KRG98483 | Soybean | cytosol | 2.8 | 18.95 |
| KRH71762 | Soybean | cytosol | 2.14 | 18.95 |
| KRG89898 | Soybean | cytosol | 4.17 | 18.52 |
| KRG96335 | Soybean | cytosol | 4.17 | 18.47 |
| KRH17929 | Soybean | cytosol | 4.82 | 18.28 |
| KRH17931 | Soybean | mitochondrion, nucleus | 7.21 | 17.87 |
| KRH73403 | Soybean | nucleus | 11.85 | 17.8 |
| KRH14719 | Soybean | nucleus | 11.85 | 17.8 |
| KRG89895 | Soybean | nucleus | 7.86 | 17.62 |
| KRH33402 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 11.91 | 17.53 |
| KRG90150 | Soybean | cytosol | 2.2 | 17.45 |
| KRG90152 | Soybean | cytosol | 7.74 | 16.58 |
| KRG90154 | Soybean | cytosol | 1.61 | 14.92 |
| KRH31732 | Soybean | nucleus | 8.46 | 12.47 |
| KRH34524 | Soybean | nucleus | 8.34 | 12.27 |
| KRG92287 | Soybean | nucleus | 8.28 | 12.19 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 8.34 | 11.4 |
| KRH16103 | Soybean | nucleus | 6.91 | 10.74 |
| KRH04994 | Soybean | nucleus | 6.85 | 10.64 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 6.85 | 10.49 |
| KRH52561 | Soybean | cytosol | 6.97 | 10.47 |
| KRH33457 | Soybean | cytosol | 0.66 | 7.53 |
Protein Annotations
| EntrezGene:100788511 | Gene3D:2.60.210.10 | MapMan:35.1 | EMBL:ACUP02003419 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G066900 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1K8T2 | InterPro:IPR002083 | InterPro:IPR008974 |
| EnsemblPlants:KRH52412 | ProteinID:KRH52412 | ProteinID:KRH52412.1 | InterPro:MATH/TRAF_dom | PFAM:PD936484 | PFAM:PF00917 |
| PFscan:PS50144 | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 | SMART:SM00061 | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniParc:UPI0002339FFF | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:5093927..5103072
Molecular Weight (calculated)
186924.0 Da
IEP (calculated)
5.104
GRAVY (calculated)
-0.379
Length
1679 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKQASSEAVP SLSSAPSFTE TATSSSWSAA AAEDLTVGSR DGGGGAQETV AVDRRGEYSA LCRWTVHNFP RIKARALWSK YFEVGGYDCR LLIYPKGDSQ
0101: ALPGYISIYL QIMDPRGTSS SKWDCFASYR LAIVNLADDS KTIHRDSWHR FSSKKKSHGW CDFTPSNTVF DPKLGYLFNT DSVLITADIL ILNESVNFTR
0201: DNNEVQSSSS SSSNAMTSSV VAGPVSDVSS GKFTWKVHNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SSVNGVEYLS MCLESKDTDK TVVLSDRSCW
0301: CLFRMSVLNQ KPGSNHMHRD SYGRFAADNK SGDNTSLGWN DYMKMSDFIG ADSGFLVDDT AVFSTSFHVI KEFSSFSKNG AVIAGRSASG ARKSDGHIGK
0401: FTWRIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRNTSSDWS CFVSHRLSVV NQRMEDKSVT KESQNRYSKA
0501: AKDWGWREFV TLTSLFDQDS GFLVQDTVIF SAEVLILKET STMQDITEND SELSSSGSQV DGNGKRSSFS WKVENFLSFK EIMETRKIFS KFFQAGGCEL
0601: RIGVYESFDT ICIYLESDQA VGSDPDKNFW VRYRMAVVNQ KNPAKTVWKE SSICTKTWNN SVLQFMKVSD MLESDAGFLV RDTVVFVCEI LDCCPWFEFS
0701: DLEVLASEDD QDALTTDPDE LIDSEDSEGI SGDEEDIFRN LLFRAGFHLT YGDNPSQPQV TLREKLLMDA GAIAGFLTGL RVYLDDPAKV KRLLLPTKLS
0801: GSCDGKKASK ADESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEVG PVADSVDACS KPSPNGSGAA SPFECERENG AMESARVPVC ERLDSVVQES
0901: SNASAVQSSD LKGNGLQEKA LPGQPICPPE TSATASENAS LRSKTKWPEQ SEELLGLIVN SLRALDGAVP QGCPEPRRRP QSAQKISLVL DKAPKHLQAD
1001: LVALVPKLVE QSEHPLAAYA LLERLQKPDA EPALRIPVYG ALSQLECGSE VWERILFQSF ELLTDSNDEP LTATIDFIFK AASQCQHLPE AVRSVRVRLK
1101: NLGLEVSPCV LDFLSKTINS WGDVAETILR DIDCDDDYGD SCSALPCGIF LFGEHDTAPS GLHVIDEQAY HASRHFSDIY ILFEMLSIPC LVAEASQTFE
1201: RAVARGVISA QSVALVLQSR LSQRLNNNGS YVSENCQHSD DATEGDACEQ LGVQRDDYTS VLGLAENLAL SRDPCVKEFV KLLYMIMFRW FANESYRGRM
1301: LKRLVDCATS NTDNGREVDF DLDILVTLVC EEQEFIRPVL SMMREVAELA NVDRAALWHQ LCASEDEIMR VREESKTEIS NMAKEKSMIS QKLTESEATS
1401: NRLKSEMRAE MDRFSREKKE LAEQIQEVES QLEWIRSERD DEIAKLSAEK KALHDRLHDA ETQLSQLKSR KRDELKKVVK EKNALAERLK NAEAARKRFD
1501: EELKRFATEN VTREEIRQSL EDEVRRLTQT VGQTEGEKRE KEEQVARCEA YIDGMESKLQ ACQQYIHTLE ASLQEEMSRH APLYGAGLEA LSLKELETLS
1601: RIHEDGLRQI HALQQRKGSP AGSPLVSPHA LPHSHGLYPT ASPPMAVGLP PSIIPNGVGI HSNGHVNGGG GVGPWFNHS
0101: ALPGYISIYL QIMDPRGTSS SKWDCFASYR LAIVNLADDS KTIHRDSWHR FSSKKKSHGW CDFTPSNTVF DPKLGYLFNT DSVLITADIL ILNESVNFTR
0201: DNNEVQSSSS SSSNAMTSSV VAGPVSDVSS GKFTWKVHNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SSVNGVEYLS MCLESKDTDK TVVLSDRSCW
0301: CLFRMSVLNQ KPGSNHMHRD SYGRFAADNK SGDNTSLGWN DYMKMSDFIG ADSGFLVDDT AVFSTSFHVI KEFSSFSKNG AVIAGRSASG ARKSDGHIGK
0401: FTWRIENFTR LKDLLKKRKI TGLCIKSRRF QIGNRDCRLI VYPRGQSQPP CHLSVFLEVT DSRNTSSDWS CFVSHRLSVV NQRMEDKSVT KESQNRYSKA
0501: AKDWGWREFV TLTSLFDQDS GFLVQDTVIF SAEVLILKET STMQDITEND SELSSSGSQV DGNGKRSSFS WKVENFLSFK EIMETRKIFS KFFQAGGCEL
0601: RIGVYESFDT ICIYLESDQA VGSDPDKNFW VRYRMAVVNQ KNPAKTVWKE SSICTKTWNN SVLQFMKVSD MLESDAGFLV RDTVVFVCEI LDCCPWFEFS
0701: DLEVLASEDD QDALTTDPDE LIDSEDSEGI SGDEEDIFRN LLFRAGFHLT YGDNPSQPQV TLREKLLMDA GAIAGFLTGL RVYLDDPAKV KRLLLPTKLS
0801: GSCDGKKASK ADESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEVG PVADSVDACS KPSPNGSGAA SPFECERENG AMESARVPVC ERLDSVVQES
0901: SNASAVQSSD LKGNGLQEKA LPGQPICPPE TSATASENAS LRSKTKWPEQ SEELLGLIVN SLRALDGAVP QGCPEPRRRP QSAQKISLVL DKAPKHLQAD
1001: LVALVPKLVE QSEHPLAAYA LLERLQKPDA EPALRIPVYG ALSQLECGSE VWERILFQSF ELLTDSNDEP LTATIDFIFK AASQCQHLPE AVRSVRVRLK
1101: NLGLEVSPCV LDFLSKTINS WGDVAETILR DIDCDDDYGD SCSALPCGIF LFGEHDTAPS GLHVIDEQAY HASRHFSDIY ILFEMLSIPC LVAEASQTFE
1201: RAVARGVISA QSVALVLQSR LSQRLNNNGS YVSENCQHSD DATEGDACEQ LGVQRDDYTS VLGLAENLAL SRDPCVKEFV KLLYMIMFRW FANESYRGRM
1301: LKRLVDCATS NTDNGREVDF DLDILVTLVC EEQEFIRPVL SMMREVAELA NVDRAALWHQ LCASEDEIMR VREESKTEIS NMAKEKSMIS QKLTESEATS
1401: NRLKSEMRAE MDRFSREKKE LAEQIQEVES QLEWIRSERD DEIAKLSAEK KALHDRLHDA ETQLSQLKSR KRDELKKVVK EKNALAERLK NAEAARKRFD
1501: EELKRFATEN VTREEIRQSL EDEVRRLTQT VGQTEGEKRE KEEQVARCEA YIDGMESKLQ ACQQYIHTLE ASLQEEMSRH APLYGAGLEA LSLKELETLS
1601: RIHEDGLRQI HALQQRKGSP AGSPLVSPHA LPHSHGLYPT ASPPMAVGLP PSIIPNGVGI HSNGHVNGGG GVGPWFNHS
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.