CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0573000-01	Rice	cytosol, plasma membrane	86.3	43.45
KRG89898	Soybean	cytosol	88.36	34.13
HORVU3Hr1G075250.1	Barley	cytosol	75.34	29.89
KRH17929	Soybean	cytosol	89.04	29.35
KRG90152	Soybean	cytosol	88.36	16.45
KRH14719	Soybean	nucleus	92.47	12.08
KRH73403	Soybean	nucleus	91.78	11.99
Os01t0771400-00	Rice	plasma membrane	80.82	11.57
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.67	11.22
Zm00001d043312_P001	Maize	nucleus	80.82	10.56
KXG33467	Sorghum	nucleus	80.14	10.47
TraesCS3D01G307100.1	Wheat	cytosol	77.4	10.24
TraesCS3B01G341000.1	Wheat	cytosol	77.4	10.24
TraesCS3A01G295900.7	Wheat	cytosol	77.4	10.24
KRH52561	Soybean	cytosol	24.66	3.22
KRH61900	Soybean	cytosol, mitochondrion, nucleus	23.97	3.19
KRH16103	Soybean	nucleus	22.6	3.06
KRH04994	Soybean	nucleus	22.6	3.05
KRH71763	Soybean	cytosol	4.11	2.32
KRH71762	Soybean	cytosol	2.74	2.11
KRG98483	Soybean	cytosol	3.42	2.02
KRH68070	Soybean	cytosol	4.79	1.86
KRG96335	Soybean	cytosol	4.79	1.85
KRH32941	Soybean	cytosol	3.42	1.74
KRH32747	Soybean	cytosol	4.11	1.64
KRG96333	Soybean	cytosol	4.11	1.46
KRG96334	Soybean	cytosol	3.42	1.44
KRH71764	Soybean	cytosol	3.42	1.39
KRH31732	Soybean	nucleus	9.59	1.23
KRG92287	Soybean	nucleus	9.59	1.23
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	9.59	1.14
KRH34524	Soybean	nucleus	8.9	1.14
KRH61745	Soybean	nucleus	7.53	1.12
KRH46376	Soybean	cytosol	2.05	0.89
KRH52412	Soybean	nucleus	7.53	0.66
KRG89895	Soybean	nucleus	1.37	0.27
HORVU3Hr1G075220.5	Barley	endoplasmic reticulum	1.37	0.26
KRH17931	Soybean	mitochondrion, nucleus	0.68	0.15
KRG90150	Soybean	cytosol	0.0	0.0
KRG90154	Soybean	cytosol	0.0	0.0
KRG98484	Soybean	cytosol	0.0	0.0
KRH61744	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:14.6.2.3	Gene3D:3.90.70.10	EMBL:ACUP02006499	EnsemblPlantsGene:GLYMA_10G124000	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	UniProt:K7LJ01	EnsemblPlants:KRH33457	ProteinID:KRH33457	ProteinID:KRH33457.1
PFAM:PF00443	PANTHER:PTHR24006	PANTHER:PTHR24006:SF614	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
UniParc:UPI000295C480	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:32346575..32347186

Molecular Weight (calculated)

17213.2 Da

IEP (calculated)

4.609

GRAVY (calculated)

-0.623

Length

146 amino acids

Sequence
(BLAST)

001: MPTTENDMPS RSIPLALQIL FYKLQYSDTS VATKEFTKSF GWDTYDSFMQ HDVQELNRVL YEKLEDKMKG TVVEGTIHKL FEGNHMNYIE CINVDYKTTR
101: KKSFYDLQLD VNGCPDVYAS FDKYVEVERL EGDNKYHVEQ YDLQVC

Best Arabidopsis Sequence Match ( AT3G11910.1 )
(BLAST)

0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.