Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 4
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89895 | Soybean | nucleus | 64.76 | 66.49 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 92.2 | 64.22 |
| TraesCS3D01G307100.1 | Wheat | cytosol | 91.94 | 64.04 |
| KRH17931 | Soybean | mitochondrion, nucleus | 56.31 | 63.96 |
| TraesCS3B01G341000.1 | Wheat | cytosol | 91.81 | 63.95 |
| Zm00001d043312_P001 | Maize | nucleus | 69.18 | 47.63 |
| KXG33467 | Sorghum | nucleus | 68.92 | 47.41 |
| HORVU2Hr1G058700.4 | Barley | cytosol | 65.67 | 45.25 |
| KRH14719 | Soybean | nucleus | 65.41 | 44.99 |
| KRH73403 | Soybean | nucleus | 65.41 | 44.99 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 63.72 | 43.75 |
| Os01t0771400-00 | Rice | plasma membrane | 58.0 | 43.73 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 56.96 | 39.18 |
| KRH17929 | Soybean | cytosol | 8.45 | 14.67 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 12.22 | 10.32 |
| HORVU0Hr1G030140.1 | Barley | mitochondrion | 1.82 | 7.49 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 9.49 | 6.5 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 13.78 | 6.34 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 10.01 | 5.63 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 10.27 | 5.49 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 1.17 | 2.45 |
| KRG89898 | Soybean | cytosol | 0.91 | 1.85 |
| KRH33457 | Soybean | cytosol | 0.26 | 1.37 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | UniProt:A0A287LPS7 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:HORVU3Hr1G075220 | EnsemblPlants:HORVU3Hr1G075220.5 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF12436 |
| PFAM:PF14533 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI000B487A54 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:562266379..562281975
Molecular Weight (calculated)
90960.1 Da
IEP (calculated)
6.290
GRAVY (calculated)
-0.610
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: RSFTGNCFYI ILHDCLIFLF NAFLPFFQDA KKGMLFIDFP PVLQLQLKRF EYDHARDIMV KINDRYEFPL QLDLDRDDGK YLSPEADRSV RNLYTLHSSV
101: LVHSGGVSGG HYYAFIRPTL SNQWYKFDDE RVTKEDMKRA LEEQYGGEEE LPHTNPGLNT NPLKFTKYSN AYMLVYIRES DKEKIVCDLE ETDVSEHLKT
201: RLRKEDEDKE NKKKEKAEAH MFTTFKVARD HDLAAQIGRD MFFDLVDYEK IHPIRVLKDM PFNQVKEEFS KELGIPVHSQ RFWWWSKRQN NTYRPTRPLT
301: QQEESYTVGQ LKDQAVRVHG SELRLYLEVV QENHLTLASK TKDDILLFFK LYDPEKEELR YVGSLFLKAS YKASDIVPKL NEIAGFQPDE DIELYEEIKF
401: EPNIMCEQID YDVSFSLNQL VDGDILCYQK RCSLDITDQH RHPNVSSFFE YVHNRQVVHF RLLDKPKQDD FSLELSKRST YDDVVEKVAQ HLGMDDPSKL
501: RLTQHIPHLQ QPKHQYIKYR SIDHLSEMLL LHNPNQMSDI LYYEILDIPL PLLQGLITLR VAFHQATHNE VLFHILRLPK GSTYSDLIDD LKSKVELSRS
601: DAELRLFQVN NNKIWKVYQP AEKIDAVHDP NVPLHVEEIP EEEKSAGPRD RLVHVVHFFK DNQHIQYYGV PFFFLIREGE ALSDIKLRIQ KKFEVPDEQF
701: LKWKFAYVAY NRPDYLQDSD IVLSRFQQKN IYGAWEQSLG LEHSDMPSKK PYMANQNRHS FEKPVKIYN
101: LVHSGGVSGG HYYAFIRPTL SNQWYKFDDE RVTKEDMKRA LEEQYGGEEE LPHTNPGLNT NPLKFTKYSN AYMLVYIRES DKEKIVCDLE ETDVSEHLKT
201: RLRKEDEDKE NKKKEKAEAH MFTTFKVARD HDLAAQIGRD MFFDLVDYEK IHPIRVLKDM PFNQVKEEFS KELGIPVHSQ RFWWWSKRQN NTYRPTRPLT
301: QQEESYTVGQ LKDQAVRVHG SELRLYLEVV QENHLTLASK TKDDILLFFK LYDPEKEELR YVGSLFLKAS YKASDIVPKL NEIAGFQPDE DIELYEEIKF
401: EPNIMCEQID YDVSFSLNQL VDGDILCYQK RCSLDITDQH RHPNVSSFFE YVHNRQVVHF RLLDKPKQDD FSLELSKRST YDDVVEKVAQ HLGMDDPSKL
501: RLTQHIPHLQ QPKHQYIKYR SIDHLSEMLL LHNPNQMSDI LYYEILDIPL PLLQGLITLR VAFHQATHNE VLFHILRLPK GSTYSDLIDD LKSKVELSRS
601: DAELRLFQVN NNKIWKVYQP AEKIDAVHDP NVPLHVEEIP EEEKSAGPRD RLVHVVHFFK DNQHIQYYGV PFFFLIREGE ALSDIKLRIQ KKFEVPDEQF
701: LKWKFAYVAY NRPDYLQDSD IVLSRFQQKN IYGAWEQSLG LEHSDMPSKK PYMANQNRHS FEKPVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.