Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 95.69 | 96.56 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 95.63 | 96.21 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 94.98 | 95.55 |
| EES07147 | Sorghum | nucleus, plastid | 80.8 | 81.14 |
| Zm00001d051075_P002 | Maize | nucleus | 79.61 | 78.62 |
| Os02t0613400-01 | Rice | extracellular | 13.7 | 77.63 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 32.66 | 64.92 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 50.9 | 64.76 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 61.3 | 60.9 |
| KRH52412 | Soybean | nucleus | 60.83 | 60.57 |
| KRH61745 | Soybean | nucleus | 34.81 | 59.45 |
| AT2G25330.1 | Thale cress | nucleus | 24.46 | 59.02 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 15.91 | 58.72 |
| Solyc06g017970.2.1 | Tomato | nucleus | 58.37 | 57.72 |
| KRH61744 | Soybean | cytosol | 21.89 | 57.1 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 55.86 | 55.79 |
| CDX76975 | Canola | nucleus, plastid | 54.61 | 55.77 |
| CDY11532 | Canola | nucleus, plastid | 54.96 | 55.63 |
| CDY58924 | Canola | nucleus, plastid | 54.96 | 55.56 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 55.26 | 55.53 |
| Bra034251.1-P | Field mustard | nucleus | 54.55 | 55.37 |
| CDY35362 | Canola | nucleus, plastid | 54.19 | 55.01 |
| VIT_11s0016g05880.t01 | Wine grape | mitochondrion | 45.45 | 50.1 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 10.41 | 15.54 |
| HORVU2Hr1G058700.4 | Barley | cytosol | 10.17 | 15.23 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 9.75 | 14.58 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 3.05 | 13.86 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 6.34 | 13.78 |
| HORVU0Hr1G030140.1 | Barley | mitochondrion | 1.2 | 10.7 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 5.62 | 10.32 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 6.34 | 9.44 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 7.24 | 8.85 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 7.06 | 8.21 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G016000.5 | EnsemblPlantsGene:HORVU0Hr1G016000 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR24007 |
| PANTHER:PTHR24007:SF6 | PFAM:PD936484 | PFAM:PF00917 | PFscan:PS50144 | SEG:seg | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI000B465E87 | UniProt:A0A287E2X0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchrUn:+:86151077..86160941
Molecular Weight (calculated)
186077.0 Da
IEP (calculated)
5.580
GRAVY (calculated)
-0.342
Length
1672 amino acids
Sequence
(BLAST)
(BLAST)
0001: SPSHSDPASA TFSVERRGDA SASCRWTLPD FPRTRARTFY SRYFEVGGFD CRLLLYPRGD TQSLPGYLSL YLQVLDPKTP SSSSSSSTTT TSSKWDCFLS
0101: YRLSVVHPSD NSKSLARDSW HRFSSKKRSH GWCDFAPSAA ASFLLPPHDS LVIAADISVL SETASFAEAD GRFTWKVFNF SLFREMIRTQ KIMSPAFFPA
0201: AAAAGGSDCG LRISVYQSNV SGAEHLSVCL EGKEPVVQAT SASSASALAS TSSGSGVPDA DRGCWCLFRV SILNQKPGGS HIHRDSYGRF GADSASLGWG
0301: DYLKMDEFLA ADGGYLFDGA VVFNASVHVI KESNSFTRTL PPVTGISGAG GGRSGTRKSD GHFGKFVWRI ENFTRLKELL KKRKITGLCI KSRRFQVGNR
0401: DCRLIVYPRG QSQPPCHLSV FLEVTDPRNT TSEWTCFVSH RLSVINQKGE EKSIMKESQN RYSKSAKDWG WREFLTLTSL FDQDAGFLVQ DTVVFSAEVL
0501: ILKETATVQE LSDEDSEICS SSSGYQIDTL PRHPSFTWKV ENFLSFKEIM ETRKIFSKYF QAGGCELRIG VYESFDTMCI YLESDQSSGV DPDKNFWVHY
0601: KMAILNQKNS LKTVCKESSI CTKTWNNSVL QFMKVSDILD PEAGFLVRDT VVFVCEIIDC CPWFDFSDLE VFASDDDQDE LSTDPDELIE SENSDDMSGD
0701: EEDMFRNLLS RAGFSLTYGD NYTQPQVTLR EKILTDASAI AGFLTGLRVY LDNPTKVKRM LLPAKVSTKG GGKKDSSKCD SSSTSLINLL MGVSVLKQAI
0801: IDLLLDIMVE CCQPSDERSS YGSSSASSKT APDSNGASSP SELIVEGEQA ECACRNQYET AESDSVNFRR NLGVENAELS ANEMPVKILE QSSCPPETTA
0901: IDLPGDESSD QTSGTKWPDQ SEELLGLIVN SLKALDCAVP HGCPEPRKRP KSVQKIALVL EKAPKKLQPD FIALVPKLVD GPEHSLAVCA LLDHLEKADA
1001: EPSLRLPVFG ALSELEFDAD VWKRVSFHAL ELLSDSNDEP LVAAISFILK AASQCQHIPQ AVCLPSINLF LLSLYLYNLF ILLLLSALTF SPPKVRAVRW
1101: RLKHLGTEVP PCVLEFLSKT VHNWPDVAEA LLKDIDSDPE PDNSCLSTPS STCSKDGLSA EGMPSWQEQA VHGSNHLSDV FVLIEMLSVP GSFVEVARVF
1201: ERALLQGAFG LQLVAMVLER RHSHKLSSKS GAVVYDLQSK QVLLDGQFEP SPIQEGEFTS VLALGEVLSL STSARVQDFV RMLYAIMFKI YAEDHYRCRF
1301: LKGLVDRATN TSDNCREVDI DMDVLVFLVK EEFGIARPVL NMMREAAEVA QADRANLWHQ ICATEDENIR LREEMDMDQT KFTNEKAVLA QRLTESEATT
1401: GHLRSELKAE KDRHIREKKE LSRQMREIEN QMEWVRSEKD EQIAKLSAER KNLHDRVSEA ETQLSQFKAR KREEIKKVTT EKNTLAERLK NAEASRKRFD
1501: DELKRHAAET QAREEIRKSL EAEVRRLTHK VGQTEGEKKE KEDQISRCEA YIDGMESKLQ VCQQYIRTLE TSLQEEMARH APLYGVGVEA LSLEELETLA
1601: NIHEQSLRQI HTIRQRKGSS HLLSVPGLFP SSSMAVGPPS SLIHTSSIAP NGVGTHGNGH RNNAVGPWFN QT
0101: YRLSVVHPSD NSKSLARDSW HRFSSKKRSH GWCDFAPSAA ASFLLPPHDS LVIAADISVL SETASFAEAD GRFTWKVFNF SLFREMIRTQ KIMSPAFFPA
0201: AAAAGGSDCG LRISVYQSNV SGAEHLSVCL EGKEPVVQAT SASSASALAS TSSGSGVPDA DRGCWCLFRV SILNQKPGGS HIHRDSYGRF GADSASLGWG
0301: DYLKMDEFLA ADGGYLFDGA VVFNASVHVI KESNSFTRTL PPVTGISGAG GGRSGTRKSD GHFGKFVWRI ENFTRLKELL KKRKITGLCI KSRRFQVGNR
0401: DCRLIVYPRG QSQPPCHLSV FLEVTDPRNT TSEWTCFVSH RLSVINQKGE EKSIMKESQN RYSKSAKDWG WREFLTLTSL FDQDAGFLVQ DTVVFSAEVL
0501: ILKETATVQE LSDEDSEICS SSSGYQIDTL PRHPSFTWKV ENFLSFKEIM ETRKIFSKYF QAGGCELRIG VYESFDTMCI YLESDQSSGV DPDKNFWVHY
0601: KMAILNQKNS LKTVCKESSI CTKTWNNSVL QFMKVSDILD PEAGFLVRDT VVFVCEIIDC CPWFDFSDLE VFASDDDQDE LSTDPDELIE SENSDDMSGD
0701: EEDMFRNLLS RAGFSLTYGD NYTQPQVTLR EKILTDASAI AGFLTGLRVY LDNPTKVKRM LLPAKVSTKG GGKKDSSKCD SSSTSLINLL MGVSVLKQAI
0801: IDLLLDIMVE CCQPSDERSS YGSSSASSKT APDSNGASSP SELIVEGEQA ECACRNQYET AESDSVNFRR NLGVENAELS ANEMPVKILE QSSCPPETTA
0901: IDLPGDESSD QTSGTKWPDQ SEELLGLIVN SLKALDCAVP HGCPEPRKRP KSVQKIALVL EKAPKKLQPD FIALVPKLVD GPEHSLAVCA LLDHLEKADA
1001: EPSLRLPVFG ALSELEFDAD VWKRVSFHAL ELLSDSNDEP LVAAISFILK AASQCQHIPQ AVCLPSINLF LLSLYLYNLF ILLLLSALTF SPPKVRAVRW
1101: RLKHLGTEVP PCVLEFLSKT VHNWPDVAEA LLKDIDSDPE PDNSCLSTPS STCSKDGLSA EGMPSWQEQA VHGSNHLSDV FVLIEMLSVP GSFVEVARVF
1201: ERALLQGAFG LQLVAMVLER RHSHKLSSKS GAVVYDLQSK QVLLDGQFEP SPIQEGEFTS VLALGEVLSL STSARVQDFV RMLYAIMFKI YAEDHYRCRF
1301: LKGLVDRATN TSDNCREVDI DMDVLVFLVK EEFGIARPVL NMMREAAEVA QADRANLWHQ ICATEDENIR LREEMDMDQT KFTNEKAVLA QRLTESEATT
1401: GHLRSELKAE KDRHIREKKE LSRQMREIEN QMEWVRSEKD EQIAKLSAER KNLHDRVSEA ETQLSQFKAR KREEIKKVTT EKNTLAERLK NAEASRKRFD
1501: DELKRHAAET QAREEIRKSL EAEVRRLTHK VGQTEGEKKE KEDQISRCEA YIDGMESKLQ VCQQYIRTLE TSLQEEMARH APLYGVGVEA LSLEELETLA
1601: NIHEQSLRQI HTIRQRKGSS HLLSVPGLFP SSSMAVGPPS SLIHTSSIAP NGVGTHGNGH RNNAVGPWFN QT
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.