Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0613400-01 | Rice | extracellular | 31.67 | 68.81 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 62.87 | 47.92 |
| KRH52412 | Soybean | nucleus | 96.88 | 36.99 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 65.05 | 31.74 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 82.37 | 31.37 |
| Solyc06g017970.2.1 | Tomato | nucleus | 74.26 | 28.15 |
| CDY11532 | Canola | nucleus, plastid | 63.34 | 24.58 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 63.34 | 24.4 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 63.65 | 24.37 |
| CDY58924 | Canola | nucleus, plastid | 62.87 | 24.37 |
| CDX76975 | Canola | nucleus, plastid | 59.75 | 23.4 |
| CDY35362 | Canola | nucleus, plastid | 58.81 | 22.89 |
| Bra034251.1-P | Field mustard | nucleus | 58.81 | 22.89 |
| EES07147 | Sorghum | nucleus, plastid | 56.94 | 21.92 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 57.1 | 21.89 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 56.47 | 21.85 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 56.47 | 21.78 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 56.32 | 21.72 |
| Zm00001d051075_P002 | Maize | nucleus | 56.79 | 21.5 |
| KRG90154 | Soybean | cytosol | 4.37 | 15.47 |
| KRH17931 | Soybean | mitochondrion, nucleus | 10.45 | 9.9 |
| KRG89895 | Soybean | nucleus | 10.45 | 8.95 |
| KRG98483 | Soybean | cytosol | 2.81 | 7.26 |
| KRG96334 | Soybean | cytosol | 3.28 | 6.03 |
| KRH73403 | Soybean | nucleus | 10.45 | 5.99 |
| KRH14719 | Soybean | nucleus | 10.3 | 5.9 |
| KRH46376 | Soybean | cytosol | 2.96 | 5.64 |
| KRH71764 | Soybean | cytosol | 3.12 | 5.56 |
| KRH71762 | Soybean | cytosol | 1.56 | 5.26 |
| KRH33402 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 9.36 | 5.26 |
| KRG96335 | Soybean | cytosol | 2.96 | 5.01 |
| KRH32747 | Soybean | cytosol | 2.81 | 4.92 |
| KRH68070 | Soybean | cytosol | 2.81 | 4.77 |
| KRG96333 | Soybean | cytosol | 2.96 | 4.63 |
| KRG90152 | Soybean | cytosol | 4.84 | 3.95 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 6.4 | 3.74 |
| KRH04994 | Soybean | nucleus | 6.24 | 3.7 |
| KRH52561 | Soybean | cytosol | 6.4 | 3.67 |
| KRH16103 | Soybean | nucleus | 6.08 | 3.61 |
| KRH32941 | Soybean | cytosol | 1.56 | 3.48 |
| KRH31732 | Soybean | nucleus | 6.08 | 3.42 |
| KRG92287 | Soybean | nucleus | 5.93 | 3.33 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 2.34 | 3.31 |
| KRH34524 | Soybean | nucleus | 5.77 | 3.24 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 5.62 | 2.93 |
| KRG98484 | Soybean | cytosol | 0.31 | 1.8 |
| KRH71763 | Soybean | cytosol | 0.47 | 1.16 |
| KRG89898 | Soybean | cytosol | 0.0 | 0.0 |
| AT2G25330.1 | Thale cress | nucleus | 0.0 | 0.0 |
| KRG90150 | Soybean | cytosol | 0.0 | 0.0 |
| KRH61745 | Soybean | nucleus | 0.0 | 0.0 |
| KRH33457 | Soybean | cytosol | 0.0 | 0.0 |
| KRH17929 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02002185 | EnsemblPlants:KRH61744 | EnsemblPlantsGene:GLYMA_04G0655002 | ncoils:Coil | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 |
| PFAM:PD936484 | ProteinID:KRH61744 | ProteinID:KRH61744.1 | SEG:seg | UniParc:UPI0006EDB131 | UniProt:A0A0R0K4U5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:5441369..5445287
Molecular Weight (calculated)
72103.3 Da
IEP (calculated)
5.082
GRAVY (calculated)
-0.462
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: VYGALSQLEC GSEVWERILF QSFELLTDSN DEPLTATINF IFKAASQCQH LPEAVRSVRV RLKNLGLEVS PCVLDFLSKT INSWGDVAET ILRDIDCDDD
101: CGDSCSALPC GIFLFGEHGT APSGLHVIDE QAYHASRHFS DIYILFEMLS IPCLVAEASQ TFERAVARGA ISAQSVTLVL QSRLSQRLNN NGSYASENFQ
201: HSDGATEGDA CEQLGVQRDD YTSVLGLAEN LALSKDPCVK EFVKLLYMIM FRWFANESHR GRMLKRLVDR ATSNTDNGRE VDFDLDILVT LVCEEQEFIR
301: PVLSMMREVA ELANVDRAAL WHQLCASEDE IVRVREESKN EISNMAKEKV MISQKLSESE ATNNRLKSEM RTEMDRFSRE KKELAEQIQE VESQLEWIRS
401: ERDDEIAKLS AEKKALHDRL HDAETQLSQL KSRKRDELKK VVKEKNALAE RLKNAEAARK RFDEELKRFA TENVTREEIR QSLEDEVRRL TQTVGQTEGE
501: KREKEEQVAR CEAYIDGMES KLQACQQYIH TLEASLQEEM SRHAPLYGAG LEALSLKELE TLSRIHEDGL RQIHALQQRK GSPAGSPLVS PHALPHTHGL
601: YPTAAPPMAV GLPPSIIPNG VGIHSNGHVN GGAVGPWFNH S
101: CGDSCSALPC GIFLFGEHGT APSGLHVIDE QAYHASRHFS DIYILFEMLS IPCLVAEASQ TFERAVARGA ISAQSVTLVL QSRLSQRLNN NGSYASENFQ
201: HSDGATEGDA CEQLGVQRDD YTSVLGLAEN LALSKDPCVK EFVKLLYMIM FRWFANESHR GRMLKRLVDR ATSNTDNGRE VDFDLDILVT LVCEEQEFIR
301: PVLSMMREVA ELANVDRAAL WHQLCASEDE IVRVREESKN EISNMAKEKV MISQKLSESE ATNNRLKSEM RTEMDRFSRE KKELAEQIQE VESQLEWIRS
401: ERDDEIAKLS AEKKALHDRL HDAETQLSQL KSRKRDELKK VVKEKNALAE RLKNAEAARK RFDEELKRFA TENVTREEIR QSLEDEVRRL TQTVGQTEGE
501: KREKEEQVAR CEAYIDGMES KLQACQQYIH TLEASLQEEM SRHAPLYGAG LEALSLKELE TLSRIHEDGL RQIHALQQRK GSPAGSPLVS PHALPHTHGL
601: YPTAAPPMAV GLPPSIIPNG VGIHSNGHVN GGAVGPWFNH S
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.