CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33457	Soybean	cytosol	34.13	88.36
KRH17929	Soybean	cytosol	96.56	82.39
HORVU3Hr1G075250.1	Barley	cytosol	70.37	72.28
Os11t0573000-01	Rice	cytosol, plasma membrane	48.68	63.45
KRG90150	Soybean	cytosol	22.49	40.09
KRG98484	Soybean	cytosol	9.79	33.33
KRH14719	Soybean	nucleus	94.18	31.84
KRH73403	Soybean	nucleus	93.92	31.75
KRH71763	Soybean	cytosol	18.78	27.41
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.84	26.12
KRG90152	Soybean	cytosol	53.17	25.64
Os01t0771400-00	Rice	plasma membrane	68.52	25.39
Zm00001d043312_P001	Maize	nucleus	73.02	24.71
KXG33467	Sorghum	nucleus	72.75	24.6
TraesCS3D01G307100.1	Wheat	cytosol	70.9	24.28
TraesCS3B01G341000.1	Wheat	cytosol	70.9	24.28
TraesCS3A01G295900.7	Wheat	cytosol	70.63	24.18
KRH32941	Soybean	cytosol	17.46	23.0
KRH46376	Soybean	cytosol	17.46	19.58
KRH68070	Soybean	cytosol	19.05	19.1
KRG96333	Soybean	cytosol	20.63	19.02
KRG96334	Soybean	cytosol	16.93	18.39
KRG96335	Soybean	cytosol	18.25	18.21
KRH71764	Soybean	cytosol	15.87	16.67
KRH32747	Soybean	cytosol	15.34	15.85
KRH71762	Soybean	cytosol	7.41	14.74
KRG98483	Soybean	cytosol	7.67	11.69
KRH31732	Soybean	nucleus	22.49	7.46
KRG92287	Soybean	nucleus	21.96	7.28
KRH34524	Soybean	nucleus	21.69	7.19
KRH61745	Soybean	nucleus	18.25	7.05
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	22.49	6.92
KRH61900	Soybean	cytosol, mitochondrion, nucleus	16.67	5.75
KRH16103	Soybean	nucleus	16.4	5.74
KRH04994	Soybean	nucleus	16.4	5.74
KRH52561	Soybean	cytosol	16.93	5.73
KRH52412	Soybean	nucleus	18.52	4.17
HORVU3Hr1G075220.5	Barley	endoplasmic reticulum	1.85	0.91
KRG89895	Soybean	nucleus	1.32	0.67
KRH17931	Soybean	mitochondrion, nucleus	0.79	0.44
KRH61744	Soybean	cytosol	0.0	0.0
KRG90154	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:14.6.2.3	MapMan:19.2.3.1.1.5	Gene3D:2.60.210.10	Gene3D:3.90.70.10	EMBL:ACUP02012308	EnsemblPlantsGene:GLYMA_20G054800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	UniProt:I1NE39	InterPro:IPR002083	InterPro:IPR008974	InterPro:IPR028889
EnsemblPlants:KRG89898	ProteinID:KRG89898	ProteinID:KRG89898.1	InterPro:MATH/TRAF_dom	PFAM:PF00443	PFAM:PF00917
ScanProsite:PS00972	PFscan:PS50144	PFscan:PS50235	PANTHER:PTHR24006	PANTHER:PTHR24006:SF614	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SMART:SM00061	SUPFAM:SSF49599	SUPFAM:SSF54001	InterPro:TRAF-like	UniParc:UPI000296CAC9
InterPro:USP_CS	InterPro:USP_dom	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:12852501..12855338

Molecular Weight (calculated)

43866.6 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.516

Length

378 amino acids

Sequence
(BLAST)

001: MTVMMPAPID QQEDEEVLVP HADLPANNHQ PMEVVAQPEN ANTVESQPVE DPPSSRFTWR IDNFSRLNTK KLYSEIFVVG AYKWRVLIFP KGNNVDYLSM
101: YLDVADSATL PYGWSRYAQF SLAVVHQTHN KYSVRKDTQH QFNARESDWG FTSFMPLGEL YDPSRGYLVN DTLIVEAEVL VRRIVDYWTY DSKKETGYVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPTG SIPLALQSLF YKLQYSDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKET
301: VVEGTIQKLF EGHHMNYIEC INVDYKSTRK ESFYDLQLDV KGCRDVYASF DKYVEVESLE GDNKYHAEQY GLQVSCYS

Best Arabidopsis Sequence Match ( AT3G11910.1 )
(BLAST)

0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.