Factsheet for HORVU3Hr1G075250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33457	Soybean	cytosol	29.89	75.34
HORVU0Hr1G030140.1	Barley	mitochondrion	36.96	72.73
KRG89898	Soybean	cytosol	72.28	70.37
KRH17929	Soybean	cytosol	72.83	60.5
TraesCS3A01G295900.7	Wheat	cytosol	98.64	32.88
TraesCS3D01G307100.1	Wheat	cytosol	98.1	32.7
TraesCS3B01G341000.1	Wheat	cytosol	97.55	32.52
Os01t0771400-00	Rice	plasma membrane	74.73	26.96
Zm00001d043312_P001	Maize	nucleus	81.25	26.77
KXG33467	Sorghum	nucleus	80.71	26.57
KRH73403	Soybean	nucleus	75.0	24.69
KRH14719	Soybean	nucleus	74.73	24.6
HORVU5Hr1G031980.4	Barley	cytosol	72.55	23.84
HORVU4Hr1G034950.2	Barley	cytosol	70.38	23.17
HORVU2Hr1G058700.4	Barley	cytosol	69.29	22.85
HORVU4Hr1G071690.9	Barley	nucleus	17.93	7.24
HORVU5Hr1G016190.3	Barley	nucleus	22.01	7.21
HORVU3Hr1G075800.5	Barley	cytosol, nucleus, plastid	22.28	5.99
HORVU1Hr1G078170.6	Barley	cytosol	22.28	5.7
HORVU0Hr1G016000.5	Barley	nucleus	13.86	3.05
HORVU3Hr1G075220.5	Barley	endoplasmic reticulum	2.45	1.17
KRG89895	Soybean	nucleus	0.27	0.13
KRH17931	Soybean	mitochondrion, nucleus	0.0	0.0

Protein Annotations

MapMan:14.6.2.3	MapMan:19.2.3.1.1.5	Gene3D:2.60.210.10	Gene3D:3.90.70.10	UniProt:A0A287LPT2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	EnsemblPlantsGene:HORVU3Hr1G075250	EnsemblPlants:HORVU3Hr1G075250.1	InterPro:IPR002083	InterPro:IPR008974	InterPro:IPR028889
InterPro:MATH/TRAF_dom	PFAM:PF00443	PFAM:PF00917	ScanProsite:PS00972	PFscan:PS50144	PFscan:PS50235
PANTHER:PTHR24006	PANTHER:PTHR24006:SF565	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SMART:SM00061	SUPFAM:SSF49599
SUPFAM:SSF54001	InterPro:TRAF-like	UniParc:UPI000B4691BA	InterPro:USP_CS	InterPro:USP_dom	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:562433367..562437543

Molecular Weight (calculated)

42043.5 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.481

Length

368 amino acids

Sequence
(BLAST)

001: MTMVTPRAPE PPPQDQDEEM LVPQQEVEVF EGPQPMEESM PAVDNESLPD ASTSRFTWKI ESISKQNCRK IHSDVFVVGG YSWRVLVFPT GNNVNHLSMY
101: LDVADAKSLP TGWSRSAQFS LAVINQLDSK HSVRKEVTHT FNSRESDWGF TSFMPLIDLY DPSKGYVVND QCIIEAEVAV RKIVDYWNYD SKKETGYVGL
201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TVDTPSGSIP LALQSLFYRL QHGDNSISTK ELTKSFGWDS YESFMQHDVQ ELNRVLCEKL EDKMKGTIVE
301: GTIQKLFEGH HMNYIECIGV DYKSTRKESF YDLALDVKGC SDVYASFDKY VAVEMLDGDN KYQSEKYG

Best Arabidopsis Sequence Match ( AT3G11910.2 )
(BLAST)

0001: MTMMTPPPLD QEDEEMLVPN PDLVEGPQPM EVAQTDPAAT AVENPPPEDP PSLKFTWTIP MFTRLNTRKH YSDVFVVGGY KWRILIFPKG NNVDHLSMYL
0101: DVADAANLPY GWSRYSQFSL AVVNQVNNRY SIRKETQHQF NARESDWGFT SFMPLSELYE PTRGYLVNDT VLIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI DFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLQLDLDRE DGRYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDIAEHL RVRLKKEQEE KEDKRKYKAQ AHLFTTIKVA RDDDITEQIG KNIYFDLVDH EKVRSFRIQK
0601: QTPFQQFKEE VAKEFGVPVQ LQRFWIWAKR QNHTYRPNRP LSPNEELQTV GQIREASNKA NNAELKLFLE IERGPDDLPI PPPEKTSEDI LLFFKLYDPE
0701: NAVLRYVGRL MVKSSSKPMD IVGQLNKMAG FAPDEEIELF EEIKFEPCVM CEQIDKKTSF RLCQIEDGDI ICYQKPLSIE ESEFRYPDVP SFLEYVQNRE
0801: LVRFRTLEKP KEDEFTMELS KLHTYDDVVE RVAEKLGLDD PSKLRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHSATK DEVIIHNIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFFHKIYKIF PSTERIENIN DQYWTLRAEE IPEEEKNIGP NDRLIHVYHF
1001: TKEAGQNQQV QNFGEPFFLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF ASFSMGRPDY LLDTDVVYNR FQRRDVYGAW EQYLGLEHID NAPKRAYAAN
1101: QNRHAYEKPV KIYN

Arabidopsis Description

UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.