Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G246800.3 | Wheat | golgi | 97.85 | 97.59 |
| TraesCS2D01G249100.1 | Wheat | nucleus | 97.67 | 97.41 |
| TraesCS2B01G263500.4 | Wheat | nucleus | 97.58 | 97.32 |
| KXG34448 | Sorghum | nucleus | 92.56 | 92.4 |
| Zm00001d007904_P003 | Maize | cytosol | 90.95 | 87.42 |
| Zm00001d018859_P010 | Maize | cytosol | 87.01 | 86.46 |
| HORVU0Hr1G030140.1 | Barley | mitochondrion | 13.89 | 82.89 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 78.76 | 78.48 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 73.92 | 73.79 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 22.85 | 69.29 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 45.25 | 65.67 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 14.16 | 17.34 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 13.62 | 13.54 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 13.89 | 11.33 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 13.98 | 10.85 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 15.23 | 10.17 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | UniProt:A0A287I3H8 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:HORVU2Hr1G058700 | EnsemblPlants:HORVU2Hr1G058700.4 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 |
| PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 |
| PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 |
| InterPro:TRAF-like | UniParc:UPI000B486B84 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:383104375..383115745
Molecular Weight (calculated)
130371.0 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.624
Length
1116 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLICRQFFA AAPAAGGRGG GGHQELPNGT QPMEVVPAEP AATVENQPTE DTPISRFTWT IDNLSRVNTK KLYSETFVVG GYKWRVLIFP RGNNVEFLSM
0101: YLDVADSAVL PYGWTRYAQF SLSVVNQIHN KFTIRKETQH QFSARESDWG FTSFMPLSEL YNPSRGYLVN DTCVIEAEVA VCKVVDYWSY DSKKETGYVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPSG SIPLALQSLF YKLQYNDSSV STKELTKSFG WDMHDSFMQH DVQELNRVLS EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVEFKSTRK ESFYDLQLDV KGCQDVYASF DKYVEVERLE GDNKYHAEQH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLQLDLD RDDGKYLSPD ADRNVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWFK FDDERVTKED AKRALEEQYG GEEELPQTNP
0501: GLNNTPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRIRLEKDR EEKERRKKEK AEAHLYTIIK VARDDDLTAQ IGKDIYFDLV DHDKVPSFRI
0601: QKQMPFTQFK EEVAKELGIP TQFQRFWLWA KRQNHTYRPN RPLTPQEEAL TVGQLKEAAN KAHNAELKLF LEVELGLDLK PLALPDKTRD DILLFFKLYD
0701: PEKEQLRYVG RLFVKASGRP QDILPKLRKM AGFLQDDDVE LYEEIKFEPN VMCEYIDNRI IFRSCQLEDG DIVCFQKSPK PDTSDQFRYP DVPSFLVYIR
0801: NRQVVHFRSL EKPKEDDFCL EMSKIFTYDE VVEKVAQQLG VDDPSKIRLT SHNCYSQQPK PQPIKYRGVE RLLDMLIHYN QTSDILYYEV LDIPLPELQA
0901: LKTLKVTYHH ATKDEVSVHS IRLPKNSTVG DVLSDIKSKV DLSHPDAELR LLEVFYHKIY KIFAPSEKIE NINDQYWTLR AEEVPEEEKN LGPFDRLIHV
1001: YHFTKDTQNQ TQVQNFGEPF FMVIREDETL SSIKERLQKK LKVSEEDFSK WKFAYISLGR PDYFEDSDSV ATRFQRNMYG AWEQYLGLEH PDTAPRKAHS
1101: ANQNRHSFER PVKIYN
0101: YLDVADSAVL PYGWTRYAQF SLSVVNQIHN KFTIRKETQH QFSARESDWG FTSFMPLSEL YNPSRGYLVN DTCVIEAEVA VCKVVDYWSY DSKKETGYVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPSG SIPLALQSLF YKLQYNDSSV STKELTKSFG WDMHDSFMQH DVQELNRVLS EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVEFKSTRK ESFYDLQLDV KGCQDVYASF DKYVEVERLE GDNKYHAEQH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLQLDLD RDDGKYLSPD ADRNVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWFK FDDERVTKED AKRALEEQYG GEEELPQTNP
0501: GLNNTPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRIRLEKDR EEKERRKKEK AEAHLYTIIK VARDDDLTAQ IGKDIYFDLV DHDKVPSFRI
0601: QKQMPFTQFK EEVAKELGIP TQFQRFWLWA KRQNHTYRPN RPLTPQEEAL TVGQLKEAAN KAHNAELKLF LEVELGLDLK PLALPDKTRD DILLFFKLYD
0701: PEKEQLRYVG RLFVKASGRP QDILPKLRKM AGFLQDDDVE LYEEIKFEPN VMCEYIDNRI IFRSCQLEDG DIVCFQKSPK PDTSDQFRYP DVPSFLVYIR
0801: NRQVVHFRSL EKPKEDDFCL EMSKIFTYDE VVEKVAQQLG VDDPSKIRLT SHNCYSQQPK PQPIKYRGVE RLLDMLIHYN QTSDILYYEV LDIPLPELQA
0901: LKTLKVTYHH ATKDEVSVHS IRLPKNSTVG DVLSDIKSKV DLSHPDAELR LLEVFYHKIY KIFAPSEKIE NINDQYWTLR AEEVPEEEKN LGPFDRLIHV
1001: YHFTKDTQNQ TQVQNFGEPF FMVIREDETL SSIKERLQKK LKVSEEDFSK WKFAYISLGR PDYFEDSDSV ATRFQRNMYG AWEQYLGLEH PDTAPRKAHS
1101: ANQNRHSFER PVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.