Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G246800.3 | Wheat | golgi | 99.73 | 99.73 |
| TraesCS2D01G249100.1 | Wheat | nucleus | 99.73 | 99.73 |
| HORVU2Hr1G058700.4 | Barley | cytosol | 97.32 | 97.58 |
| KXG34448 | Sorghum | nucleus | 93.92 | 94.01 |
| Zm00001d007904_P003 | Maize | cytosol | 92.23 | 88.89 |
| Zm00001d018859_P010 | Maize | cytosol | 88.03 | 87.71 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 79.54 | 78.97 |
| TraesCS3B01G341000.1 | Wheat | cytosol | 67.83 | 68.75 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 15.28 | 15.92 |
| TraesCS5B01G071600.1 | Wheat | nucleus | 13.67 | 13.64 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 13.58 | 11.52 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 14.03 | 11.33 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 15.28 | 10.29 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS2B01G263500 | EnsemblPlants:TraesCS2B01G263500.4 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd00121 | TIGR:cd02659 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:354073127..354084546
Molecular Weight (calculated)
130993.0 Da
IEP (calculated)
5.590
GRAVY (calculated)
-0.641
Length
1119 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTISTPPPAP AEPQPQQEEE EVLVPHQELP NGTQPMEVVP AELATTVENQ PTEDTPISRF TWTIDNLSRV NTKKLYSETF VVGGYKWRVL IFPRGNNVEF
0101: LSMYLDVADS AVLPYGWTRY AQFSLSVVNQ IHNKFTIRKE TQHQFSARES DWGFTSFMPL SELYNPSRGY LVNDTCVIEA EVAVCKVVDY WSYDSKKETG
0201: YVGLKNQGAT CYMNSLLQTL YHIPYFRKAV YHMPTTENDM PSGSIPLALQ SLFYKLQYND SSVSTKELTK SFGWDMHDSF MQHDVQELNR VLSEKLEDKM
0301: KGTVVEGTIQ QLFEGHHMNY IECINVDFKS TRKESFYDLQ LDVKGCQDVY ASFDKYVEVE RLEGDNKYHA EQHGLQDAKK GVLFIDFPPV LQLQLKRFEY
0401: DFMRDTMVKI NDRYEFPLQL DLDRDDGKYL SPDADRNVRN LYTLHSVLVH SGGVHGGHYY AFIRPTLSDQ WFKFDDERVT KEDAKRALEE QYGGEEELPQ
0501: TNPGLNNTPF KFTKYSNAYM LVYIRESDKD KIICNVDEKD IAEHLRIRLE KDREEKERRK KEKAEAHLYT IIKVARDDDL TAQIGKDIYF DLVDHDKVPS
0601: FRIQKQMPFT QFKEEVAKEL GIPTQFQRFW LWAKRQNHTY RPNRPLTPQE EALTVGQLKE AANKAHNAEL KLFLEVELGL DLKPLALPDK TREDILLFFK
0701: LYDPEKEQLR YVGRLFVKAS GRPQDILPKL RKMAGFLQDD DVELYEEIKF EPNVMCEYID NRIIFRSCQL EDGDIVCFQK SPKPDTADQF RYPDVPSFLV
0801: YIRNRQVVHF RSLEKPKEDD FCLEMSKIFT YDEVVEKVAQ QLGVDDPSKI RLTSHNCYSQ QPKPQPIKYR GVERLLDMLI HYNQTSDILY YEVLDIPLPE
0901: LQALKTLKVT YHHATKDEVS VHSIRLPKNS TVGDVLSDIK SKVDLSHPDA ELRLLEVFYH KIYKIFAPSE KIENINDQYW TLRAEEVPEE EKNLGPFDRL
1001: IHVYHFTKDT QNQTQVQNFG EPFFMVIRED ETLSSIKERL QKKLKVSDED FSKWKFAYIS LGRPDYFEDS DTVATRFQRN MYGAWEQYLG LEHPDTAPRK
1101: AHSANQNRHS FERPVKIYN
0101: LSMYLDVADS AVLPYGWTRY AQFSLSVVNQ IHNKFTIRKE TQHQFSARES DWGFTSFMPL SELYNPSRGY LVNDTCVIEA EVAVCKVVDY WSYDSKKETG
0201: YVGLKNQGAT CYMNSLLQTL YHIPYFRKAV YHMPTTENDM PSGSIPLALQ SLFYKLQYND SSVSTKELTK SFGWDMHDSF MQHDVQELNR VLSEKLEDKM
0301: KGTVVEGTIQ QLFEGHHMNY IECINVDFKS TRKESFYDLQ LDVKGCQDVY ASFDKYVEVE RLEGDNKYHA EQHGLQDAKK GVLFIDFPPV LQLQLKRFEY
0401: DFMRDTMVKI NDRYEFPLQL DLDRDDGKYL SPDADRNVRN LYTLHSVLVH SGGVHGGHYY AFIRPTLSDQ WFKFDDERVT KEDAKRALEE QYGGEEELPQ
0501: TNPGLNNTPF KFTKYSNAYM LVYIRESDKD KIICNVDEKD IAEHLRIRLE KDREEKERRK KEKAEAHLYT IIKVARDDDL TAQIGKDIYF DLVDHDKVPS
0601: FRIQKQMPFT QFKEEVAKEL GIPTQFQRFW LWAKRQNHTY RPNRPLTPQE EALTVGQLKE AANKAHNAEL KLFLEVELGL DLKPLALPDK TREDILLFFK
0701: LYDPEKEQLR YVGRLFVKAS GRPQDILPKL RKMAGFLQDD DVELYEEIKF EPNVMCEYID NRIIFRSCQL EDGDIVCFQK SPKPDTADQF RYPDVPSFLV
0801: YIRNRQVVHF RSLEKPKEDD FCLEMSKIFT YDEVVEKVAQ QLGVDDPSKI RLTSHNCYSQ QPKPQPIKYR GVERLLDMLI HYNQTSDILY YEVLDIPLPE
0901: LQALKTLKVT YHHATKDEVS VHSIRLPKNS TVGDVLSDIK SKVDLSHPDA ELRLLEVFYH KIYKIFAPSE KIENINDQYW TLRAEEVPEE EKNLGPFDRL
1001: IHVYHFTKDT QNQTQVQNFG EPFFMVIRED ETLSSIKERL QKKLKVSDED FSKWKFAYIS LGRPDYFEDS DTVATRFQRN MYGAWEQYLG LEHPDTAPRK
1101: AHSANQNRHS FERPVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.