Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G307100.1 | Wheat | cytosol | 99.0 | 99.0 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 98.64 | 98.64 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 32.52 | 97.55 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 63.95 | 91.81 |
| KRH33457 | Soybean | cytosol | 10.24 | 77.4 |
| KRH17929 | Soybean | cytosol | 29.71 | 74.04 |
| Zm00001d043312_P001 | Maize | nucleus | 74.0 | 73.14 |
| KXG33467 | Sorghum | nucleus | 73.55 | 72.63 |
| KRG89898 | Soybean | cytosol | 24.28 | 70.9 |
| Os01t0771400-00 | Rice | plasma membrane | 64.31 | 69.61 |
| KRH73403 | Soybean | nucleus | 69.84 | 68.96 |
| KRH14719 | Soybean | nucleus | 69.75 | 68.87 |
| TraesCS2B01G263500.4 | Wheat | nucleus | 68.75 | 67.83 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 68.03 | 66.64 |
| KRG89895 | Soybean | nucleus | 44.57 | 65.69 |
| KRH17931 | Soybean | mitochondrion, nucleus | 38.68 | 63.07 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 15.49 | 15.92 |
| TraesCS5B01G071600.1 | Wheat | nucleus | 13.32 | 13.1 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 13.95 | 11.68 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 14.04 | 11.18 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 14.04 | 9.33 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS3B01G341000 | EnsemblPlants:TraesCS3B01G341000.1 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd00121 | TIGR:cd02659 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:547565014..547585305
Molecular Weight (calculated)
129016.0 Da
IEP (calculated)
5.751
GRAVY (calculated)
-0.610
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMVTPRAPE PPPQDQDEEM LVPQQEVEVF EGPQPMEESM PAVDNESLPD ASTSRFTWKI ESISKHSGRK THSDIFMVGG YSWRVLIFPT GNNVNHLSMY
0101: LDVADAKSLP IGWSRSAQFS LAVINQLDSK HSVRKEVTHT FNSRESDWGF TSFMPLIDLY DPSKGYIVND QCIIEAEVAV RKIVDYWNYD SKKETGYVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TVDTPSGSIP LALQSLFYRL QHGDNSISTK ELTKSFGWDS YESFMQHDVQ ELNRVLCEKL EDKMKGTIVE
0301: GTIQKLFEGH HMNYIECIGV DYKSTRKESF YDLALDVKGC SDVYASFDKY VAVEMLDGDN KYQSEKYGLQ DAKKGMLFID FPPVLQLQLK RFEYDHARDI
0401: MVKINDRYEF PLQLDLDRDD GKYLSPEADR SVRNLYTLHS VLVHSGGVSG GHYYAFIRPT LSNQWYKFDD ERVTKEDLKR ALEEQYGGEE ELPHTNPGLN
0501: MNPLKFTKYS NAYMLVYIRE SDKEKIVCDL EETDINEDLK TRLRKEDEDK ENKKKEKAEA HMFTTFKVAR DHDLAAQIGR DMFFDLVDYE KIHPIRVLKD
0601: MPFNQVKEEF SKEFGIPVHS QRFWWWSKRQ NHTYRPTRPL TQQEESYTVG QLKDAAIRMN SSELRLYLEV VQENHLTLAS RTNDDILLFF KLYDPEKEEL
0701: RYVGNLLLKA SSTPSDIVPK LNEIAGFQPD EDIELYEEIK FEPNIMCEPV DCDVSFSLNQ IADGDILCYQ KRCSLDQHRH PNVSSFFEYV HNRQVVHFRL
0801: LEKPKQDDFS LELSKRSTYD DVVEKVAQHL GMDDPSKLRL TQHIPHLQQP KHQYIKYRSI DHLSDMLLLR NPNQMSDILY YEILDIPLPE LQGLITLRVA
0901: FHQATPNEVL FHIIRLPKGS TYSDLIDDLK SRVQLSRSDA ELRLFQVNNN KIWKVYQPTE KIDAVHDPNV PLHVEEIPEV EKSAGPRDRL VHVVHFFKDN
1001: QHIQYYGVPF FFLIREGEAL SDIKVRIQKK FEVPDEQFIK WKFAYVAYNR PDYLQDSDIV LSRFQQKNIY GPWEQSLGLE HSDMPTKRAN QNRHSFEKPV
1101: KIYN
0101: LDVADAKSLP IGWSRSAQFS LAVINQLDSK HSVRKEVTHT FNSRESDWGF TSFMPLIDLY DPSKGYIVND QCIIEAEVAV RKIVDYWNYD SKKETGYVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TVDTPSGSIP LALQSLFYRL QHGDNSISTK ELTKSFGWDS YESFMQHDVQ ELNRVLCEKL EDKMKGTIVE
0301: GTIQKLFEGH HMNYIECIGV DYKSTRKESF YDLALDVKGC SDVYASFDKY VAVEMLDGDN KYQSEKYGLQ DAKKGMLFID FPPVLQLQLK RFEYDHARDI
0401: MVKINDRYEF PLQLDLDRDD GKYLSPEADR SVRNLYTLHS VLVHSGGVSG GHYYAFIRPT LSNQWYKFDD ERVTKEDLKR ALEEQYGGEE ELPHTNPGLN
0501: MNPLKFTKYS NAYMLVYIRE SDKEKIVCDL EETDINEDLK TRLRKEDEDK ENKKKEKAEA HMFTTFKVAR DHDLAAQIGR DMFFDLVDYE KIHPIRVLKD
0601: MPFNQVKEEF SKEFGIPVHS QRFWWWSKRQ NHTYRPTRPL TQQEESYTVG QLKDAAIRMN SSELRLYLEV VQENHLTLAS RTNDDILLFF KLYDPEKEEL
0701: RYVGNLLLKA SSTPSDIVPK LNEIAGFQPD EDIELYEEIK FEPNIMCEPV DCDVSFSLNQ IADGDILCYQ KRCSLDQHRH PNVSSFFEYV HNRQVVHFRL
0801: LEKPKQDDFS LELSKRSTYD DVVEKVAQHL GMDDPSKLRL TQHIPHLQQP KHQYIKYRSI DHLSDMLLLR NPNQMSDILY YEILDIPLPE LQGLITLRVA
0901: FHQATPNEVL FHIIRLPKGS TYSDLIDDLK SRVQLSRSDA ELRLFQVNNN KIWKVYQPTE KIDAVHDPNV PLHVEEIPEV EKSAGPRDRL VHVVHFFKDN
1001: QHIQYYGVPF FFLIREGEAL SDIKVRIQKK FEVPDEQFIK WKFAYVAYNR PDYLQDSDIV LSRFQQKNIY GPWEQSLGLE HSDMPTKRAN QNRHSFEKPV
1101: KIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.