Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14719 | Soybean | nucleus | 98.84 | 98.84 |
| KRH17929 | Soybean | cytosol | 37.39 | 94.36 |
| KRG89898 | Soybean | cytosol | 31.75 | 93.92 |
| KRG89895 | Soybean | nucleus | 62.79 | 93.72 |
| Os11t0573000-01 | Rice | cytosol, plasma membrane | 24.15 | 93.1 |
| KRH17931 | Soybean | mitochondrion, nucleus | 56.35 | 93.06 |
| KRH33457 | Soybean | cytosol | 11.99 | 91.78 |
| KRG90152 | Soybean | cytosol | 57.87 | 82.53 |
| KRH33402 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.8 | 77.21 |
| KRG90154 | Soybean | cytosol | 12.16 | 75.14 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 24.69 | 75.0 |
| TraesCS3D01G307100.1 | Wheat | cytosol | 69.05 | 69.93 |
| TraesCS3B01G341000.1 | Wheat | cytosol | 68.96 | 69.84 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 68.96 | 69.84 |
| KXG33467 | Sorghum | nucleus | 69.5 | 69.5 |
| Zm00001d043312_P001 | Maize | nucleus | 69.41 | 69.47 |
| Os01t0771400-00 | Rice | plasma membrane | 60.91 | 66.76 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 44.99 | 65.41 |
| KRG90150 | Soybean | cytosol | 8.23 | 43.4 |
| KRH71763 | Soybean | cytosol | 8.41 | 36.29 |
| KRH32941 | Soybean | cytosol | 8.5 | 33.1 |
| KRG98484 | Soybean | cytosol | 3.22 | 32.43 |
| KRH46376 | Soybean | cytosol | 9.3 | 30.86 |
| KRH68070 | Soybean | cytosol | 10.29 | 30.5 |
| KRG96334 | Soybean | cytosol | 9.39 | 30.17 |
| KRG96335 | Soybean | cytosol | 10.11 | 29.82 |
| KRH71762 | Soybean | cytosol | 5.01 | 29.47 |
| KRG96333 | Soybean | cytosol | 10.38 | 28.29 |
| KRH71764 | Soybean | cytosol | 8.94 | 27.78 |
| KRH32747 | Soybean | cytosol | 8.94 | 27.32 |
| KRG98483 | Soybean | cytosol | 5.72 | 25.81 |
| KRH31732 | Soybean | nucleus | 17.17 | 16.86 |
| KRH34524 | Soybean | nucleus | 16.73 | 16.39 |
| KRH16103 | Soybean | nucleus | 15.74 | 16.3 |
| KRG92287 | Soybean | nucleus | 16.55 | 16.23 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 15.74 | 16.06 |
| KRH04994 | Soybean | nucleus | 15.47 | 16.0 |
| KRH52561 | Soybean | cytosol | 15.92 | 15.94 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 16.99 | 15.47 |
| KRH61745 | Soybean | nucleus | 11.72 | 13.38 |
| KRH52412 | Soybean | nucleus | 17.8 | 11.85 |
| KRH61744 | Soybean | cytosol | 5.99 | 10.45 |
Protein Annotations
| EntrezGene:100778442 | MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 |
| EMBL:ACUP02001275 | MEROPS:C19.A53 | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G271500 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| UniProt:I1JIM7 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | EnsemblPlants:KRH73403 | ProteinID:KRH73403 |
| ProteinID:KRH73403.1 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 |
| ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF614 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like |
| UniParc:UPI0002336F3E | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:45530111..45542191
Molecular Weight (calculated)
131166.0 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.648
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTVMTPAPID QQQEDEEMLV PHTDLAENNH QPMEVVAQPD AANTVESQPV EDPSTSRFTW KIENFSRMNT KKLYSEIFVV GGYKWRVLIF PKGNNVDYLS
0101: MYLDVADSAS LPYGWSRYAQ FSLAVVNQIH NKYSVRKDTQ HQFNARESDW GFTSFMPLGE LYDPSRGYLV NDTLVVEAEV LVRRIVDYWT YDSKKETGYV
0201: GLKNQGATCY MNSLLQTLYH IPYFRKAVYH MPTTENDMPS GSIPLALQSL FYKLQYSDTS VATKELTKSF GWDTYDSFMQ HDVQELNRVL CEKLEDKMKG
0301: TVVEGTIQKL FEGHHMNYIE CINVDYKSTR KESFYDLQLD VKGCPDVYAS FDKYVEVERL EGDNKYHAEQ YGLQDAKKGV LFIDFPPVLQ LQLKRFEYDF
0401: MRDTMVKIND RYEFPLQLDL DRENGKYLSP DADRNVRNLY TLHSVLVHSG GVHGGHYYAF IRPTLSEQWY KFDDERVTKE DTKRALEEQY GGEEELPQTN
0501: PGFNNTPFKF TKYSNAYMLV YIREADKDKV ICNVDEKDIA EHLRERLKKE QEEKEHKKKE KAEAHLYTII KVARDEDLAE QIGKDIYFDL VDHDKVRSFR
0601: VQKQTSFNLF KDEVAKEFGI PVQFQRFWLW AKRQNHTYRP NRPLTHMEEA QSVGQLREVS NKVHNAELKL FLEVELGLDL RPIAPPDKTK DDILLFFKLY
0701: DTEKEELRYV GRLFVKATGK PSEILTRLNK MAGYDPDEEI GLYEEIKFEP NVMCEPIDKK VTFRASQLED GDIICFQKAP AIDNEHVRYP DVPSYLEYVH
0801: NRQVVHFRSL EKPKEDDFCL EMSRLYTYDD VVEKVAQQLG LDDPSIIRLT PHNCYSQQPK PQPIKYRGVE HLSDMLVHYN QTSDILYYEV LDIPLPELQG
0901: LKTLKVAFHH ATKDEVVIHT IRLPKQSTVG DVLNDLKTKV ELSDPEAELR LLEVFYHKIY KVFPPNEKIE SINDQYWTLR AEEIPEEEKN LGPHDRLIHV
1001: YHFTKDTAQN QMQIQNFGEP FFLVIHEGET LAEIKVRIQK KLQVPDDEFV KWKFAFFSLG RPEYLQDSDI VSSRFQRRDV YGAWEQYLGL EHTDNAPKRS
1101: YAVNQNRHTF EKPVKIYN
0101: MYLDVADSAS LPYGWSRYAQ FSLAVVNQIH NKYSVRKDTQ HQFNARESDW GFTSFMPLGE LYDPSRGYLV NDTLVVEAEV LVRRIVDYWT YDSKKETGYV
0201: GLKNQGATCY MNSLLQTLYH IPYFRKAVYH MPTTENDMPS GSIPLALQSL FYKLQYSDTS VATKELTKSF GWDTYDSFMQ HDVQELNRVL CEKLEDKMKG
0301: TVVEGTIQKL FEGHHMNYIE CINVDYKSTR KESFYDLQLD VKGCPDVYAS FDKYVEVERL EGDNKYHAEQ YGLQDAKKGV LFIDFPPVLQ LQLKRFEYDF
0401: MRDTMVKIND RYEFPLQLDL DRENGKYLSP DADRNVRNLY TLHSVLVHSG GVHGGHYYAF IRPTLSEQWY KFDDERVTKE DTKRALEEQY GGEEELPQTN
0501: PGFNNTPFKF TKYSNAYMLV YIREADKDKV ICNVDEKDIA EHLRERLKKE QEEKEHKKKE KAEAHLYTII KVARDEDLAE QIGKDIYFDL VDHDKVRSFR
0601: VQKQTSFNLF KDEVAKEFGI PVQFQRFWLW AKRQNHTYRP NRPLTHMEEA QSVGQLREVS NKVHNAELKL FLEVELGLDL RPIAPPDKTK DDILLFFKLY
0701: DTEKEELRYV GRLFVKATGK PSEILTRLNK MAGYDPDEEI GLYEEIKFEP NVMCEPIDKK VTFRASQLED GDIICFQKAP AIDNEHVRYP DVPSYLEYVH
0801: NRQVVHFRSL EKPKEDDFCL EMSRLYTYDD VVEKVAQQLG LDDPSIIRLT PHNCYSQQPK PQPIKYRGVE HLSDMLVHYN QTSDILYYEV LDIPLPELQG
0901: LKTLKVAFHH ATKDEVVIHT IRLPKQSTVG DVLNDLKTKV ELSDPEAELR LLEVFYHKIY KVFPPNEKIE SINDQYWTLR AEEIPEEEKN LGPHDRLIHV
1001: YHFTKDTAQN QMQIQNFGEP FFLVIHEGET LAEIKVRIQK KLQVPDDEFV KWKFAFFSLG RPEYLQDSDI VSSRFQRRDV YGAWEQYLGL EHTDNAPKRS
1101: YAVNQNRHTF EKPVKIYN
0001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.