Factsheet for Os11t0573000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33457	Soybean	cytosol	43.45	86.3
KRH17929	Soybean	cytosol	83.45	54.63
Os12t0489100-01	Rice	cytosol, extracellular, plasma membrane	97.59	51.36
KRG89898	Soybean	cytosol	63.45	48.68
Os01t0771400-00	Rice	plasma membrane	87.59	24.9
KRH14719	Soybean	nucleus	93.1	24.15
KRH73403	Soybean	nucleus	93.1	24.15
Os03t0192800-01	Rice	nucleus	20.34	18.97
KRG89895	Soybean	nucleus	30.34	11.75
Os05t0508700-01	Rice	nucleus	12.07	4.54
KRH17931	Soybean	mitochondrion, nucleus	7.93	3.4
Os01t0775300-01	Rice	cytosol, mitochondrion, nucleus	12.41	2.76
Os03t0192900-01	Rice	cytosol, nucleus	0.0	0.0
Os07t0163800-01	Rice	cytosol, plasma membrane	0.0	0.0
Os02t0613400-01	Rice	extracellular	0.0	0.0
Os12t0489200-01	Rice	cytosol	0.0	0.0
Os12t0597200-01	Rice	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

MapMan:14.6.2.3	MapMan:19.2.3.1.1.5	Gene3D:3.90.70.10	ProteinID:BAH95346.1	ProteinID:BAT14545.1	UniProt:C7J965
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
InterPro:IPR028889	EnsemblPlantsGene:Os11g0573000	EnsemblPlants:Os11t0573000-01	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR24006	PANTHER:PTHR24006:SF577	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
UniParc:UPI0001B66F49	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os11t0573000-01);Similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed. (Os11t0573000-02)

Coordinates

chr11:-:21500549..21514325

Molecular Weight (calculated)

33954.2 Da

IEP (calculated)

6.131

GRAVY (calculated)

-0.598

Length

290 amino acids

Sequence
(BLAST)

001: EVAVRKMVDY WTYDSKKETG YVGLKNQGAT CYMNSLLQTL YHIPYFRKAV YHMPTTENDM PSGSIPLALQ SLFYKLQYSD NSVATKELTK SFGWDTYDSF
101: MQHDVQELNR VLCEKLEDKM KRTVVEGTIE KLFEGHHINY IECINVDYKS NRKESFYDLQ LDVKGCRDVY ASFDKYVEVE RLEGDNKYHA ENHGLQDAKK
201: GVLFLDFPPV LQLQLKRFEY DYMRDTMVKI NDRYEFPLQL DLDRDDGKYL APDADRSIRN LYALHSVLVH SGGVHGGHYY AFIRPTLSDQ

Best Arabidopsis Sequence Match ( AT5G06600.2 )
(BLAST)

0001: MTMMTPPPVD PEDEEMLVPN SDLVDGPAQP MEVTQPETAA STVENQPAED PPTLKFTWTI PNFSRQNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.