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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400047482 Potato nucleus 70.74 39.29
HORVU4Hr1G071690.9 Barley nucleus 83.92 28.65
OQU79121 Sorghum nucleus 85.85 26.38
Zm00001d028177_P004 Maize cytosol 87.46 25.35
TraesCS4D01G266600.2 Wheat mitochondrion, nucleus 85.53 24.77
TraesCS4A01G038800.2 Wheat mitochondrion, nucleus 85.53 24.77
Zm00001d020157_P011 Maize cytosol, mitochondrion, nucleus 86.5 24.7
TraesCS4B01G267000.2 Wheat mitochondrion, nucleus 84.89 24.58
GSMUA_Achr11P... Banana nucleus 80.39 22.89
VIT_04s0008g03170.t01 Wine grape mitochondrion 73.63 20.93
CDY05943 Canola cytosol 68.81 20.58
KRH16103 Soybean nucleus 71.38 20.56
Bra017972.1-P Field mustard cytosol 68.49 20.48
CDY08151 Canola cytosol 68.49 20.48
KRH04994 Soybean nucleus 71.06 20.44
AT3G49600.1 Thale cress cytosol 70.1 20.43
Os11t0573000-01 Rice cytosol, plasma membrane 18.97 20.34
Solyc03g078390.2.1 Tomato nucleus 71.06 20.26
KRH61900 Soybean cytosol, mitochondrion, nucleus 71.38 20.26
KRH52561 Soybean cytosol 71.38 19.87
CDY00212 Canola cytosol 65.27 19.79
Bra019603.1-P Field mustard cytosol 64.95 19.69
Os12t0489100-01 Rice cytosol, extracellular, plasma membrane 23.15 13.07
Os01t0771400-00 Rice plasma membrane 23.15 7.06
Os05t0508700-01 Rice nucleus 8.36 3.37
PGSC0003DMT400047483 Potato nucleus 4.5 2.38
Os01t0775300-01 Rice cytosol, mitochondrion, nucleus 9.0 2.15
PGSC0003DMT400044267 Potato nucleus 0.0 0.0
Os12t0597200-01 Rice cytosol, nucleus, plastid 0.0 0.0
Os12t0489200-01 Rice cytosol 0.0 0.0
Os07t0163800-01 Rice cytosol, plasma membrane 0.0 0.0
Os03t0192900-01 Rice cytosol, nucleus 0.0 0.0
CDX86966 Canola cytosol 0.0 0.0
Os02t0613400-01 Rice extracellular 0.0 0.0
Protein Annotations
MapMan:19.2.3.1.1.12Gene3D:3.90.70.10UniProt:A0A0N7KGR3ProteinID:BAS82737.1GO:GO:0003674GO:GO:0003824
GO:GO:0004843GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464
GO:GO:0006508GO:GO:0006511GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234
GO:GO:0009056GO:GO:0009987GO:GO:0016579GO:GO:0016787GO:GO:0019538GO:GO:0036459
InterPro:IPR028889EnsemblPlantsGene:Os03g0192800EnsemblPlants:Os03t0192800-01PFAM:PF00443ScanProsite:PS00972PFscan:PS50235
PANTHER:PTHR45185InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C19_UCHSUPFAM:SSF54001UniParc:UPI0000DB4C77InterPro:USP_CS
InterPro:USP_domSEG:seg::::
Description
Similar to Ubiquitin-specific protease 26. (Os03t0192800-01)
Coordinates
chr3:+:4836142..4838183
Molecular Weight (calculated)
34695.6 Da
IEP (calculated)
8.299
GRAVY (calculated)
-0.323
Length
311 amino acids
Sequence
(BLAST)
001: MSRPNTRNKS KRPRADDCES PSAVFKKIHS TGAITKGDIK QLYMVWKPVC HGCHGNSKDS PNCFCGLIPA ANGVRKSGLW QRTNEIIRAL GPNPSTDLRD
101: STETPAGLTN LGATCYANSI LQCLYMNTSF RLGIFSLEPD ILKMHPVLDQ LARLFAQLHS SKMAFIDSAP FIKTLELDNG VQQDSHEFLT LFLSLLEGSL
201: SHSKVPGART IVQHLFRGSV SHVTRCSSCG RDSEASSKME DFYELELNIK GLNNLEQSLD DYLSTEALDG ENQYFCESCQ KRVDATRCIK LRSLPPVVNF
301: QLKRYVFLPK V
Best Arabidopsis Sequence Match ( AT3G49600.1 )
(BLAST)
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.