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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05943 Canola cytosol 81.82 83.94
Bra017972.1-P Field mustard cytosol 81.72 83.85
CDY08151 Canola cytosol 81.54 83.65
CDY00212 Canola cytosol 79.66 82.85
Bra019603.1-P Field mustard cytosol 79.57 82.75
CDX86966 Canola cytosol 52.58 76.22
Os03t0192800-01 Rice nucleus 20.43 70.1
Os03t0192900-01 Rice cytosol, nucleus 5.53 66.29
VIT_04s0008g03170.t01 Wine grape mitochondrion 62.98 61.43
PGSC0003DMT400047482 Potato nucleus 31.77 60.54
KRH16103 Soybean nucleus 60.73 60.0
KRH61900 Soybean cytosol, mitochondrion, nucleus 61.48 59.85
KRH04994 Soybean nucleus 60.36 59.57
KRH52561 Soybean cytosol 61.48 58.73
Solyc03g078390.2.1 Tomato nucleus 58.76 57.47
OQU79121 Sorghum nucleus 53.98 56.92
GSMUA_Achr11P... Banana nucleus 57.26 55.95
TraesCS4A01G038800.2 Wheat mitochondrion, nucleus 55.58 55.21
TraesCS4D01G266600.2 Wheat mitochondrion, nucleus 55.58 55.21
TraesCS4B01G267000.2 Wheat mitochondrion, nucleus 55.3 54.93
Zm00001d020157_P011 Maize cytosol, mitochondrion, nucleus 55.95 54.82
Zm00001d028177_P004 Maize cytosol 54.73 54.43
HORVU4Hr1G071690.9 Barley nucleus 46.2 54.12
PGSC0003DMT400047483 Potato nucleus 29.43 53.4
AT3G11910.1 Thale cress cytosol 16.31 15.61
AT5G06600.1 Thale cress cytosol 16.21 15.5
AT5G52330.3 Thale cress cytosol 3.28 8.82
AT5G43560.1 Thale cress nucleus 8.15 8.25
AT2G25330.1 Thale cress nucleus 5.06 7.79
AT1G04300.3 Thale cress nucleus 7.5 7.39
AT2G25320.3 Thale cress nucleus, plastid 10.22 6.51
AT4G16045.1 Thale cress cytosol 2.16 6.02
Protein Annotations
MapMan:19.2.3.1.1.12Gene3D:3.10.20.90Gene3D:3.90.70.10EntrezGene:824122ProteinID:AEE78564.1EMBL:AF302674
ProteinID:ANM63555.1ArrayExpress:AT3G49600EnsemblPlantsGene:AT3G49600RefSeq:AT3G49600TAIR:AT3G49600RefSeq:AT3G49600-TAIR-G
EnsemblPlants:AT3G49600.1TAIR:AT3G49600.1Unigene:At.22294MEROPS:C19.068ProteinID:CAB62464.1InterPro:DUSP-like_sf
GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004843GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005730GO:GO:0006464
GO:GO:0006508GO:GO:0006511GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008234GO:GO:0009056GO:GO:0009791GO:GO:0009987GO:GO:0016579GO:GO:0016787
GO:GO:0019538GO:GO:0036459GO:GO:0048316InterPro:IPR000626InterPro:IPR006615InterPro:IPR028889
RefSeq:NP_001325635.1RefSeq:NP_566922.1PFAM:PF00443PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0009089PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00972
ScanProsite:PS00973PFscan:PS50053PFscan:PS50235PFscan:PS51283PANTHER:PTHR45185InterPro:Papain_like_cys_pep_sf
InterPro:Pept_C19_DUSPInterPro:Peptidase_C19_UCHUniProt:Q9SCJ9SMART:SM00695SUPFAM:SSF143791SUPFAM:SSF54001
SUPFAM:SSF54236Symbol:UBP26UniParc:UPI00001636EFInterPro:USP48InterPro:USP_CSInterPro:USP_dom
InterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_domSEG:seg:::
Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
Coordinates
chr3:-:18380417..18387239
Molecular Weight (calculated)
119940.0 Da
IEP (calculated)
5.881
GRAVY (calculated)
-0.482
Length
1067 amino acids
Sequence
(BLAST)
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.