Factsheet for Os03t0192900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047483	Potato	nucleus	64.04	9.69
CDX86966	Canola	cytosol	65.17	7.88
TraesCS4D01G266600.2	Wheat	mitochondrion, nucleus	94.38	7.82
TraesCS4B01G267000.2	Wheat	mitochondrion, nucleus	94.38	7.82
TraesCS4A01G038800.2	Wheat	mitochondrion, nucleus	94.38	7.82
OQU79121	Sorghum	nucleus	85.39	7.51
Zm00001d020157_P011	Maize	cytosol, mitochondrion, nucleus	88.76	7.25
Zm00001d028177_P004	Maize	cytosol	83.15	6.9
VIT_04s0008g03170.t01	Wine grape	mitochondrion	73.03	5.94
CDY05943	Canola	cytosol	66.29	5.67
KRH61900	Soybean	cytosol, mitochondrion, nucleus	69.66	5.66
KRH16103	Soybean	nucleus	68.54	5.65
GSMUA_Achr11P...	Banana	nucleus	68.54	5.59
Bra017972.1-P	Field mustard	cytosol	65.17	5.58
CDY08151	Canola	cytosol	65.17	5.58
AT3G49600.1	Thale cress	cytosol	66.29	5.53
KRH52561	Soybean	cytosol	68.54	5.46
Bra019603.1-P	Field mustard	cytosol	62.92	5.46
CDY00212	Canola	cytosol	62.92	5.46
KRH04994	Soybean	nucleus	65.17	5.37
Solyc03g078390.2.1	Tomato	nucleus	65.17	5.32
Os02t0613400-01	Rice	extracellular	14.61	4.41
Os07t0163800-01	Rice	cytosol, plasma membrane	10.11	3.06
Os12t0597200-01	Rice	cytosol, nucleus, plastid	10.11	2.91
PGSC0003DMT400044267	Potato	nucleus	10.11	1.88
Os01t0775300-01	Rice	cytosol, mitochondrion, nucleus	7.87	0.54
PGSC0003DMT400047482	Potato	nucleus	0.0	0.0
Os01t0771400-00	Rice	plasma membrane	0.0	0.0
Os12t0489200-01	Rice	cytosol	0.0	0.0
Os12t0489100-01	Rice	cytosol, extracellular, plasma membrane	0.0	0.0
HORVU4Hr1G071690.9	Barley	nucleus	0.0	0.0
Os11t0573000-01	Rice	cytosol, plasma membrane	0.0	0.0
Os05t0508700-01	Rice	nucleus	0.0	0.0
Os03t0192800-01	Rice	nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	ProteinID:BAF11158.1	ProteinID:BAS82738.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006508
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:Os03g0192900
EnsemblPlants:Os03t0192900-01	PANTHER:PTHR45185	UniProt:Q0DUD0	SUPFAM:SSF54236	UniParc:UPI0000E11F72	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

Similar to Ubiquitin-specific protease 26. (Os03t0192900-01)

Coordinates

chr3:+:4842276..4844355

Molecular Weight (calculated)

9889.9 Da

IEP (calculated)

8.869

GRAVY (calculated)

-0.415

Length

89 amino acids

Sequence
(BLAST)

1: VCEECIGEKE SCALVEKLNY QNEDIQVYLV RGKEAPKSIR EASAAVPVPD RRTSKRSRRT TSGNSISLKV SGSTTVYQLK LMIWESLGV

Best Arabidopsis Sequence Match ( AT3G49600.1 )
(BLAST)

0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC

Arabidopsis Description

UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.