Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0192800-01 | Rice | nucleus | 39.29 | 70.74 |
| Solyc03g078390.2.1 | Tomato | nucleus | 96.43 | 49.5 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 58.57 | 36.0 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 68.75 | 35.19 |
| KRH16103 | Soybean | nucleus | 62.5 | 32.41 |
| KRH04994 | Soybean | nucleus | 62.14 | 32.19 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 62.68 | 32.03 |
| Bra017972.1-P | Field mustard | cytosol | 59.29 | 31.92 |
| CDY05943 | Canola | cytosol | 59.29 | 31.92 |
| CDY08151 | Canola | cytosol | 59.11 | 31.83 |
| KRH52561 | Soybean | cytosol | 63.39 | 31.78 |
| AT3G49600.1 | Thale cress | cytosol | 60.54 | 31.77 |
| CDY00212 | Canola | cytosol | 56.79 | 30.99 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 59.29 | 30.91 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 59.29 | 30.91 |
| Bra019603.1-P | Field mustard | cytosol | 56.61 | 30.9 |
| GSMUA_Achr11P... | Banana | nucleus | 60.0 | 30.77 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 58.75 | 30.63 |
| OQU79121 | Sorghum | nucleus | 53.39 | 29.55 |
| Zm00001d028177_P004 | Maize | cytosol | 56.43 | 29.45 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 57.14 | 29.38 |
| CDX86966 | Canola | cytosol | 15.18 | 11.55 |
| PGSC0003DMT400072539 | Potato | cytosol | 21.43 | 10.7 |
| PGSC0003DMT400007793 | Potato | cytosol | 20.71 | 10.44 |
| PGSC0003DMT400042094 | Potato | cytosol | 4.82 | 6.63 |
| PGSC0003DMT400047483 | Potato | nucleus | 4.82 | 4.59 |
| PGSC0003DMT400042093 | Potato | nucleus | 0.89 | 0.75 |
| PGSC0003DMT400044267 | Potato | nucleus | 0.0 | 0.0 |
| Os03t0192900-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.12 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:M1BKU3 | PFAM:PF00443 |
| EnsemblPlantsGene:PGSC0003DMG401018450 | PGSC:PGSC0003DMG401018450 | EnsemblPlants:PGSC0003DMT400047482 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR45185 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI000295021C | InterPro:USP48 |
| InterPro:USP_CS | InterPro:USP_dom | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG401018450]
Coordinates
chr3:+:32065113..32072988
Molecular Weight (calculated)
63335.8 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.472
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHQRPNTRS KGKRNRGDDC ADVAAEIYRN VLSTRLVTKD DVNQLYMIWK PACQGCRINT KDNPNCFCGL IPLQNGNRKS GLWQKTSEVV NALGSDPSDD
101: CRASPETPAG LTNLGATCYA NSILQCLYMN KSFREGVFSI EPDVLKQQPV LDQLARLFAK LHLYKMAFVD SAPFIRTLEL DNGVQQDSHE FLTLLFSLLE
201: RCLSRSSVLK ARTIVQDLFR GGVSHVTMCS KCGNESEASS KIEDFYELEL NVKGLKSLDE SLDDYLSVEE LQGDNQYYCD SCATRVDATR SIKLRSLPAV
301: LNFQLKRCIF LPNTTTRKKI SSAFCFPEEL SMTRRTSEHF QSELIYDLSA ILIHKGSAAN SGHYVAHIKN ENTQQWWEFD DEHVSNLGCQ PFGKGSSHSA
401: VKPSQTEQLD HSSSDVIIEN GNEPDAGERQ ASKTDVTKVK TFSSCDAYML MYVLRRPKNC DKMPIDSSGY IVEKEACTSS EVDSHLPPHL YEEVEKLNDS
501: YVDSCEQYKM KKESEVNCIM ERRLEVRSIL SKAAVQSPEE FYFWISMDWL RLWADNIVPS
101: CRASPETPAG LTNLGATCYA NSILQCLYMN KSFREGVFSI EPDVLKQQPV LDQLARLFAK LHLYKMAFVD SAPFIRTLEL DNGVQQDSHE FLTLLFSLLE
201: RCLSRSSVLK ARTIVQDLFR GGVSHVTMCS KCGNESEASS KIEDFYELEL NVKGLKSLDE SLDDYLSVEE LQGDNQYYCD SCATRVDATR SIKLRSLPAV
301: LNFQLKRCIF LPNTTTRKKI SSAFCFPEEL SMTRRTSEHF QSELIYDLSA ILIHKGSAAN SGHYVAHIKN ENTQQWWEFD DEHVSNLGCQ PFGKGSSHSA
401: VKPSQTEQLD HSSSDVIIEN GNEPDAGERQ ASKTDVTKVK TFSSCDAYML MYVLRRPKNC DKMPIDSSGY IVEKEACTSS EVDSHLPPHL YEEVEKLNDS
501: YVDSCEQYKM KKESEVNCIM ERRLEVRSIL SKAAVQSPEE FYFWISMDWL RLWADNIVPS
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.