Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g071700.1.1 | Tomato | cytosol, plastid | 98.02 | 98.02 |
| PGSC0003DMT400072539 | Potato | cytosol | 82.45 | 81.64 |
| KRG90152 | Soybean | cytosol | 56.71 | 80.36 |
| KRH33402 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.5 | 75.46 |
| KRG90154 | Soybean | cytosol | 12.06 | 74.03 |
| KRG90150 | Soybean | cytosol | 8.01 | 41.98 |
| PGSC0003DMT400042094 | Potato | cytosol | 8.64 | 23.59 |
| PGSC0003DMT400047482 | Potato | nucleus | 10.44 | 20.71 |
| PGSC0003DMT400047483 | Potato | nucleus | 5.67 | 10.71 |
| PGSC0003DMT400044267 | Potato | nucleus | 4.5 | 10.46 |
| PGSC0003DMT400042093 | Potato | nucleus | 5.04 | 8.38 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | UniProt:M0ZTJ4 |
| InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | EnsemblPlantsGene:PGSC0003DMG402003010 |
| PGSC:PGSC0003DMG402003010 | EnsemblPlants:PGSC0003DMT400007793 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 |
| PANTHER:PTHR24006 | PANTHER:PTHR24006:SF614 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 |
| SUPFAM:SSF54001 | InterPro:TRAF-like | UniParc:UPI0002952C94 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG402003010]
Coordinates
chr11:+:43180999..43204736
Molecular Weight (calculated)
130383.0 Da
IEP (calculated)
5.364
GRAVY (calculated)
-0.672
Length
1111 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTPAPTDEEE EMLVPRSDLV FEGPQPMEAQ AETGNDVEKQ PPEDPQTSRF TWKIENFSRL NVKKLYSDPF VVGGYKWRIL IFPKGNNVDY LSMYLDVAES
0101: ANLPYGWSRY ALFNLSIVNQ IHNKYSIRKE TQHQFNARES DWGFTSFMPL GELYDPNKGY LVDDTCVVDA EVAVRKIVDY WSYDSKKETG FVGLKNQGAT
0201: CYMNSLLQTL YHIPYFRKAV YHMPTTENDM PSASIPLALQ SLFYKLQYSD NSIATKELTK SFGWDTYDSF LQHDVQELNR VLCEKLEEKM KGTVVEGTIQ
0301: QLFEGHHMNY IECINVDYKS TRKESFYDLQ LDVKGCADVY ASFDKYVEVE RLEGDNKYHA EQYGLQDAKK GVLFMDFPPV LQLQLKRFEY DFSRDTMVKI
0401: NDRYEFPLQL DLDRENGKYL SPEADGSVRN LYTLHSVLVH SGGVHGGHYY AFIRPTLSDQ WYKFDDERVT KEDVKRALEE QYGGEEELPQ TNPGFNNTPF
0501: KFTKYSNAYM LVYIRESDKE KIMCNVDEKD IAEHVRARLK REQEEKEQKK KEKAEAHLYT IIKVSRDEDL RQQIGKDIHF DLVDYDKVRS FRIQKQTLFS
0601: IFKEEVAKEF GVPVQSQRFW LWAKRQNHTY RPNRPLTHLE EAQTVGQLRE VSNKVQNAEL KLFLEVELGL DLRHITPPDK TKDDIMLFFK IYDPEKEELR
0701: YAGRLFVKGT SNPTEILNKL NEMAGYAPDQ EIELYEEIKF EPIVLCEPID KKFAFRTNQL EDGDIVCYQK SLSSESRQKL RYPDVPSFLE YVQNRQVVHF
0801: RSLEKLKEDD FCLELSKINT YDEVVERVAQ RLGLDDPSKI RLTPHNCYSQ QPKPQPIKYR GVDTLGDMLV HYNQTSDILY YEVLDIPLPE LQGLKTLKVA
0901: FHHATKDEVV TYTIRLPKQS TVGDVINDLK TKVEFSKPDA ELRLLEVFYH KIYKIFPTSE KIENINDQYW TLRAEEIPEE EKNLGPNDRL IHVYHFTKET
1001: AQNQMQIQNF GEPFLLVIYE GETLAQVKVR IQKKLQVPDE EFAKWKFAFL SLGRPEYLED SDILSNRFQR KDVYGAWEQY LGLEHPDNAP KRIHAAYQNR
1101: PTYEKPVKIY N
0101: ANLPYGWSRY ALFNLSIVNQ IHNKYSIRKE TQHQFNARES DWGFTSFMPL GELYDPNKGY LVDDTCVVDA EVAVRKIVDY WSYDSKKETG FVGLKNQGAT
0201: CYMNSLLQTL YHIPYFRKAV YHMPTTENDM PSASIPLALQ SLFYKLQYSD NSIATKELTK SFGWDTYDSF LQHDVQELNR VLCEKLEEKM KGTVVEGTIQ
0301: QLFEGHHMNY IECINVDYKS TRKESFYDLQ LDVKGCADVY ASFDKYVEVE RLEGDNKYHA EQYGLQDAKK GVLFMDFPPV LQLQLKRFEY DFSRDTMVKI
0401: NDRYEFPLQL DLDRENGKYL SPEADGSVRN LYTLHSVLVH SGGVHGGHYY AFIRPTLSDQ WYKFDDERVT KEDVKRALEE QYGGEEELPQ TNPGFNNTPF
0501: KFTKYSNAYM LVYIRESDKE KIMCNVDEKD IAEHVRARLK REQEEKEQKK KEKAEAHLYT IIKVSRDEDL RQQIGKDIHF DLVDYDKVRS FRIQKQTLFS
0601: IFKEEVAKEF GVPVQSQRFW LWAKRQNHTY RPNRPLTHLE EAQTVGQLRE VSNKVQNAEL KLFLEVELGL DLRHITPPDK TKDDIMLFFK IYDPEKEELR
0701: YAGRLFVKGT SNPTEILNKL NEMAGYAPDQ EIELYEEIKF EPIVLCEPID KKFAFRTNQL EDGDIVCYQK SLSSESRQKL RYPDVPSFLE YVQNRQVVHF
0801: RSLEKLKEDD FCLELSKINT YDEVVERVAQ RLGLDDPSKI RLTPHNCYSQ QPKPQPIKYR GVDTLGDMLV HYNQTSDILY YEVLDIPLPE LQGLKTLKVA
0901: FHHATKDEVV TYTIRLPKQS TVGDVINDLK TKVEFSKPDA ELRLLEVFYH KIYKIFPTSE KIENINDQYW TLRAEEIPEE EKNLGPNDRL IHVYHFTKET
1001: AQNQMQIQNF GEPFLLVIYE GETLAQVKVR IQKKLQVPDE EFAKWKFAFL SLGRPEYLED SDILSNRFQR KDVYGAWEQY LGLEHPDNAP KRIHAAYQNR
1101: PTYEKPVKIY N
0001: MTMMTPPPVD PEDEEMLVPN SDLVDGPAQP MEVTQPETAA STVENQPAED PPTLKFTWTI PNFSRQNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.