Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0192900-01 | Rice | cytosol, nucleus | 9.69 | 64.04 |
| Solyc03g078390.2.1 | Tomato | nucleus | 90.14 | 48.58 |
| CDX86966 | Canola | cytosol | 47.62 | 38.04 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 63.44 | 34.1 |
| GSMUA_Achr11P... | Banana | nucleus | 57.65 | 31.04 |
| OQU79121 | Sorghum | nucleus | 52.72 | 30.63 |
| CDY00212 | Canola | cytosol | 51.36 | 29.43 |
| AT3G49600.1 | Thale cress | cytosol | 53.4 | 29.43 |
| Bra019603.1-P | Field mustard | cytosol | 51.19 | 29.34 |
| KRH16103 | Soybean | nucleus | 53.74 | 29.26 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 54.08 | 29.2 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 54.42 | 29.2 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 53.06 | 29.05 |
| KRH52561 | Soybean | cytosol | 55.1 | 29.01 |
| Zm00001d028177_P004 | Maize | cytosol | 52.89 | 28.98 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 52.72 | 28.86 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 52.55 | 28.77 |
| KRH04994 | Soybean | nucleus | 52.04 | 28.31 |
| CDY08151 | Canola | cytosol | 49.32 | 27.88 |
| CDY05943 | Canola | cytosol | 49.32 | 27.88 |
| Bra017972.1-P | Field mustard | cytosol | 48.98 | 27.69 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 34.18 | 22.06 |
| PGSC0003DMT400044267 | Potato | nucleus | 5.27 | 6.49 |
| PGSC0003DMT400042093 | Potato | nucleus | 7.14 | 6.29 |
| PGSC0003DMT400072539 | Potato | cytosol | 11.56 | 6.06 |
| PGSC0003DMT400007793 | Potato | cytosol | 10.71 | 5.67 |
| PGSC0003DMT400047482 | Potato | nucleus | 4.59 | 4.82 |
| Os03t0192800-01 | Rice | nucleus | 2.38 | 4.5 |
| PGSC0003DMT400042094 | Potato | cytosol | 0.34 | 0.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400047483 | EnsemblPlantsGene:PGSC0003DMG402018450 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:DUSP-like_sf | InterPro:IPR006615 |
| InterPro:Pept_C19_DUSP | InterPro:Ubiquitin-like_domsf | PANTHER:PTHR45185 | PFscan:PS51283 | PGSC:PGSC0003DMG402018450 | SEG:seg |
| SUPFAM:SSF143791 | SUPFAM:SSF54236 | UniParc:UPI0002962E71 | UniProt:M1BKU4 | MapMan:19.2.3.1.1.12 | : |
Description
Ubiquitin carboxyl-terminal hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG402018450]
Coordinates
chr3:+:32075671..32084004
Molecular Weight (calculated)
65886.6 Da
IEP (calculated)
6.751
GRAVY (calculated)
-0.405
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGEATPHR LLALWRDDLQ KATPWRQKAR GKKSEKGVTF CIFLKKGDQF RVLKVKRIID NSSIQCTHGK VPVSKIGSMK RLSSEAWTML FSKYGGGPVL
101: AKDDYCVDCL FGVAQSMALA DNYRDRRTLM KEFAEAALAG DCVDEKLYYI SKPWLQQWLR RKNVDSPCEA DAGPTASIRC PHGQLMPEQA SGARRVLIPE
201: TLWNFTREIA MAVKPDDSVG CSTFFSDSEP CTQCSIQLTE VACFEDTLRE FKLKQRQSHE KLAMGKGIPI LPGIRYYLLP SSWLSKWKSY SNASGKSAPA
301: ELETLDDVIG FLMCEKHSRL LERPPDLACK RGSIFQKSPA TDTLTIITDD DWKLFCEDWG GTAAKGITAE IDFLGNDFVG SSEDMAISEE HMNWNDESNV
401: GPESRRFIIK ISPEVCEECI AERKSCELKR KLNYSDEDIC VCFTRGKEPP KSVLEASVNS LEPNRRTSKR SRKTAFGNSV KLNVSGSTSV YQLKMMIWEA
501: FGIVKENQVL HKGSLVIDGE SACLADLNIF PGDVLWVTDS EIHEHRDIAD ELSGQKMEER KTEEGFRGTL LSSSLSSQFV SEASACLN
101: AKDDYCVDCL FGVAQSMALA DNYRDRRTLM KEFAEAALAG DCVDEKLYYI SKPWLQQWLR RKNVDSPCEA DAGPTASIRC PHGQLMPEQA SGARRVLIPE
201: TLWNFTREIA MAVKPDDSVG CSTFFSDSEP CTQCSIQLTE VACFEDTLRE FKLKQRQSHE KLAMGKGIPI LPGIRYYLLP SSWLSKWKSY SNASGKSAPA
301: ELETLDDVIG FLMCEKHSRL LERPPDLACK RGSIFQKSPA TDTLTIITDD DWKLFCEDWG GTAAKGITAE IDFLGNDFVG SSEDMAISEE HMNWNDESNV
401: GPESRRFIIK ISPEVCEECI AERKSCELKR KLNYSDEDIC VCFTRGKEPP KSVLEASVNS LEPNRRTSKR SRKTAFGNSV KLNVSGSTSV YQLKMMIWEA
501: FGIVKENQVL HKGSLVIDGE SACLADLNIF PGDVLWVTDS EIHEHRDIAD ELSGQKMEER KTEEGFRGTL LSSSLSSQFV SEASACLN
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.