Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017972.1-P | Field mustard | cytosol | 98.17 | 98.17 |
| CDY08151 | Canola | cytosol | 97.69 | 97.69 |
| CDY00212 | Canola | cytosol | 83.46 | 84.6 |
| AT3G49600.1 | Thale cress | cytosol | 83.94 | 81.82 |
| CDX86966 | Canola | cytosol | 55.19 | 77.99 |
| Os03t0192800-01 | Rice | nucleus | 20.58 | 68.81 |
| Os03t0192900-01 | Rice | cytosol, nucleus | 5.67 | 66.29 |
| PGSC0003DMT400047482 | Potato | nucleus | 31.92 | 59.29 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 62.31 | 59.23 |
| KRH16103 | Soybean | nucleus | 60.19 | 57.96 |
| KRH04994 | Soybean | nucleus | 59.42 | 57.17 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 59.81 | 56.75 |
| KRH52561 | Soybean | cytosol | 60.1 | 55.95 |
| Solyc03g078390.2.1 | Tomato | nucleus | 57.5 | 54.81 |
| OQU79121 | Sorghum | nucleus | 52.5 | 53.95 |
| GSMUA_Achr11P... | Banana | nucleus | 56.25 | 53.57 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 55.1 | 52.62 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 54.33 | 52.61 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 54.33 | 52.61 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 54.23 | 52.51 |
| Zm00001d028177_P004 | Maize | cytosol | 53.85 | 52.19 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 44.81 | 51.15 |
| PGSC0003DMT400047483 | Potato | nucleus | 27.88 | 49.32 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 3.46 | 19.78 |
| CDY08485 | Canola | cytosol | 12.5 | 15.7 |
| CDY01069 | Canola | cytosol | 16.54 | 15.43 |
| CDY53923 | Canola | cytosol | 16.35 | 15.3 |
| CDX98939 | Canola | cytosol | 15.96 | 14.87 |
| CDY55765 | Canola | cytosol | 15.87 | 14.8 |
| CDX70087 | Canola | cytosol | 15.87 | 14.78 |
| CDY04994 | Canola | cytosol | 15.87 | 14.78 |
| CDY14077 | Canola | cytosol | 15.87 | 14.78 |
| CDX81009 | Canola | cytosol | 15.87 | 14.76 |
| CDX73847 | Canola | cytosol | 15.29 | 14.49 |
| CDY67533 | Canola | cytosol, nucleus | 2.12 | 11.46 |
| CDY47909 | Canola | cytosol | 1.15 | 10.53 |
| CDY26906 | Canola | cytosol | 2.12 | 10.0 |
| CDY01264 | Canola | cytosol | 1.73 | 8.78 |
| CDX73257 | Canola | cytosol | 3.27 | 8.37 |
| CDY01258 | Canola | cytosol | 1.63 | 8.29 |
| CDY72484 | Canola | cytosol | 1.15 | 7.32 |
| CDX94711 | Canola | nucleus | 6.73 | 7.27 |
| CDY22344 | Canola | nucleus | 6.44 | 7.23 |
| CDY10066 | Canola | nucleus | 7.02 | 7.2 |
| CDX86642 | Canola | nucleus | 7.21 | 7.18 |
| CDY32539 | Canola | nucleus | 6.83 | 7.06 |
| CDX89828 | Canola | nucleus | 6.92 | 6.79 |
| CDX93823 | Canola | cytosol | 2.5 | 6.72 |
| CDY18218 | Canola | nucleus | 6.63 | 6.52 |
| CDY11532 | Canola | nucleus, plastid | 9.62 | 6.05 |
| CDY58924 | Canola | nucleus, plastid | 9.62 | 6.05 |
| CDX76975 | Canola | nucleus, plastid | 9.42 | 5.99 |
| CDY68000 | Canola | nucleus | 0.58 | 5.66 |
| CDY35362 | Canola | nucleus, plastid | 8.94 | 5.65 |
Protein Annotations
| MapMan:19.2.3.1.1.12 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | GO:A0A078F296 | EnsemblPlants:CDY05943 | ProteinID:CDY05943 |
| ProteinID:CDY05943.1 | InterPro:DUSP-like_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00121766001 |
| InterPro:IPR000626 | InterPro:IPR006615 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50053 | PFscan:PS50235 | PFscan:PS51283 | PANTHER:PTHR45185 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_C19_DUSP |
| InterPro:Peptidase_C19_UCH | SMART:SM00695 | SUPFAM:SSF143791 | SUPFAM:SSF54001 | SUPFAM:SSF54236 | UniParc:UPI0004EEF915 |
| InterPro:USP48 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg |
Description
BnaC08g21200D
Coordinates
chrLK031966:-:788962..795057
Molecular Weight (calculated)
116350.0 Da
IEP (calculated)
5.497
GRAVY (calculated)
-0.487
Length
1040 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRPNTRNKNK RQRPSDAADS YSQILRKIHE ANDVTDEDVN QLFMISKPLC QGCRVNTRDN PNCFCGLVPP PNGSRKSGLW QKTSEIIQAL GPDLSSELRD
0101: SDSTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVD VLKQYPVLDQ IARLFAQLYA SKKSFVDSDA FVKTLELDNG IQQDIHEFST LLLSLLERCL
0201: RHSGVSKAKT IVQDLFRGSV SHVTTCSKCG RESEASSKVE DFYALELNIK GLKSLDDSLN DYLSLEHLNG DNQYFCGSCD ARVDATRCIK LRTLPPVITF
0301: QLKRCVFLPK TTAKKKITSS LSFPQVLDMR SRLAESSENE LTYELSAVLI HKGSAVNSGH YVAHIKDEKT GLWWKFDDEQ VSELGTHPFD GGSSSTAQSE
0401: SNGAASSGKT KDVKQSGSSS IKSEVFSSSD AYMLMYSLRC GKKESQEGQR ENPLDIANGE VASVQQPEGC YLPSHLDKWI NDLNATFLEA CKQFDLTKES
0501: QLKTLTERRQ EVRTILSEAA VQSLEEQYFW ISTEWIRLWA DTISPPALDN TPLLCSHGKV LASKVTCMKR ISELAWTKLE SKFNGGPKLG KGDYCRECLM
0601: DGARMVVSSD SYRDRRTFMK NIATDVLSGK CEDGNYYISK AWLQQWVKRK NIDAPSEADA GPTNAITCNA LKVTPEDTSG CQCFPLDSIQ CSHCTSELSE
0701: VAGVEDALRT IKAKQRQNHD KLATGKGIAL TPQSPYFLLP SPWLMQWRSY INMTGKNSSS VPEPELLDGV INTLKCQKHT RLLERLPELV YRRGSLFQKN
0801: PSTDKLTIIP EDDWKYFCEE WGGIVEKGVS ALIEDGSNMN RSASQDVIDL DQDSSPDVNM EIDNQQLIIR TFPEVCEECI GERESCELMQ KLTYSEGDVS
0901: VCLVRGKEAP KSMLNASDSS FEVDRRTSKR SRRTNYGKQT SLKVSATTTV YQLKMMIWQL LGVMKENQEL HKGTQLIDQE SATLADMNIF PGDKLWVRDT
1001: EIHEHRDIAD ELCDTKSGPQ DIEEGFRGTL LTGDITFEAC
0101: SDSTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVD VLKQYPVLDQ IARLFAQLYA SKKSFVDSDA FVKTLELDNG IQQDIHEFST LLLSLLERCL
0201: RHSGVSKAKT IVQDLFRGSV SHVTTCSKCG RESEASSKVE DFYALELNIK GLKSLDDSLN DYLSLEHLNG DNQYFCGSCD ARVDATRCIK LRTLPPVITF
0301: QLKRCVFLPK TTAKKKITSS LSFPQVLDMR SRLAESSENE LTYELSAVLI HKGSAVNSGH YVAHIKDEKT GLWWKFDDEQ VSELGTHPFD GGSSSTAQSE
0401: SNGAASSGKT KDVKQSGSSS IKSEVFSSSD AYMLMYSLRC GKKESQEGQR ENPLDIANGE VASVQQPEGC YLPSHLDKWI NDLNATFLEA CKQFDLTKES
0501: QLKTLTERRQ EVRTILSEAA VQSLEEQYFW ISTEWIRLWA DTISPPALDN TPLLCSHGKV LASKVTCMKR ISELAWTKLE SKFNGGPKLG KGDYCRECLM
0601: DGARMVVSSD SYRDRRTFMK NIATDVLSGK CEDGNYYISK AWLQQWVKRK NIDAPSEADA GPTNAITCNA LKVTPEDTSG CQCFPLDSIQ CSHCTSELSE
0701: VAGVEDALRT IKAKQRQNHD KLATGKGIAL TPQSPYFLLP SPWLMQWRSY INMTGKNSSS VPEPELLDGV INTLKCQKHT RLLERLPELV YRRGSLFQKN
0801: PSTDKLTIIP EDDWKYFCEE WGGIVEKGVS ALIEDGSNMN RSASQDVIDL DQDSSPDVNM EIDNQQLIIR TFPEVCEECI GERESCELMQ KLTYSEGDVS
0901: VCLVRGKEAP KSMLNASDSS FEVDRRTSKR SRRTNYGKQT SLKVSATTTV YQLKMMIWQL LGVMKENQEL HKGTQLIDQE SATLADMNIF PGDKLWVRDT
1001: EIHEHRDIAD ELCDTKSGPQ DIEEGFRGTL LTGDITFEAC
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.