Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 98.6 | 98.6 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 98.04 | 98.04 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 80.54 | 94.95 |
| Os03t0192900-01 | Rice | cytosol, nucleus | 7.82 | 94.38 |
| Os03t0192800-01 | Rice | nucleus | 24.77 | 85.53 |
| OQU79121 | Sorghum | nucleus | 73.09 | 77.57 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 78.49 | 77.41 |
| Zm00001d028177_P004 | Maize | cytosol | 77.19 | 77.26 |
| GSMUA_Achr11P... | Banana | nucleus | 66.67 | 65.57 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 60.8 | 59.69 |
| PGSC0003DMT400047482 | Potato | nucleus | 30.91 | 59.29 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 57.82 | 56.66 |
| Solyc03g078390.2.1 | Tomato | nucleus | 57.54 | 56.65 |
| KRH16103 | Soybean | nucleus | 56.89 | 56.57 |
| KRH04994 | Soybean | nucleus | 56.33 | 55.97 |
| AT3G49600.1 | Thale cress | cytosol | 55.21 | 55.58 |
| KRH52561 | Soybean | cytosol | 57.73 | 55.51 |
| Bra019603.1-P | Field mustard | cytosol | 52.42 | 54.87 |
| CDY00212 | Canola | cytosol | 52.42 | 54.87 |
| CDY08151 | Canola | cytosol | 52.61 | 54.33 |
| CDY05943 | Canola | cytosol | 52.51 | 54.23 |
| Bra017972.1-P | Field mustard | cytosol | 52.42 | 54.13 |
| PGSC0003DMT400047483 | Potato | nucleus | 28.86 | 52.72 |
| CDX86966 | Canola | cytosol | 31.84 | 46.47 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 16.76 | 16.11 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 16.11 | 15.46 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 15.64 | 15.22 |
| TraesCS2A01G246800.3 | Wheat | golgi | 15.83 | 15.19 |
| TraesCS5A01G060400.1 | Wheat | nucleus | 8.19 | 7.84 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 10.52 | 6.82 |
| TraesCS3A01G176700.1 | Wheat | cytosol | 1.21 | 6.67 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 8.01 | 6.54 |
| PGSC0003DMT400044267 | Potato | nucleus | 2.7 | 6.07 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 7.82 | 6.05 |
Protein Annotations
| MapMan:19.2.3.1.1.12 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | InterPro:DUSP-like_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0048316 | InterPro:IPR000626 | InterPro:IPR006615 |
| InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50053 | PFscan:PS50235 |
| PFscan:PS51283 | PANTHER:PTHR45185 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_C19_DUSP | InterPro:Peptidase_C19_UCH | SMART:SM00695 |
| SUPFAM:SSF143791 | SUPFAM:SSF54001 | SUPFAM:SSF54236 | EnsemblPlantsGene:TraesCS4A01G038800 | EnsemblPlants:TraesCS4A01G038800.2 | InterPro:USP48 |
| InterPro:USP_CS | InterPro:USP_dom | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | TIGR:cd01769 | TIGR:cd02668 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:31152677..31163354
Molecular Weight (calculated)
118816.0 Da
IEP (calculated)
6.145
GRAVY (calculated)
-0.500
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRHNTRNKN KRPRADESAS PSYAALKRIH STGAITQDDI RQLYSVWKPV CQGCHGNTKD SPNCFCGLIP TTGGTRKTGL WQKNGEHVGS LGPDPSKDLR
0101: ASTETPAGLT NLGATCYANS ILQCLYMNTS FRSGIFSLEP DILKKQPVLD QLARLFAQLH SSKMAFIDSA PFIKTLELDN GVQQDSHEFL TLFLSLLERS
0201: LSYSKVAVAK TIVQDLFRGS VSHVTRCSSC GRDSEASSKM EDFYELELNI KGLSNLEESL DDYLSVEALN GENQYSCESC QKRVDATRCI KLRSLPPVVN
0301: FQLKRYVFLP KTTTKKKISS SFSFPGQLDM GKRLSDPSSN YIYDLAAILI HKGSAANSGH YVAHIKDESN GHWWEFDDEC VSSLGFHPFG EKPGKSSDKA
0401: DRKSEGTSTE GSVANGNNSS HHEAAPTSNM GEMFSSTDAY MLMYKRSSKD ENGIKSNNIV EASNSSLPRH LMDEIDALNA SCVNECGEYL SKKDNLLASI
0501: QERRQEVKSV ITEAPATPDD DSYFWISLDW LRQWADNATP PSSIDNIPIQ CEHGKVPASK VTSMKRLSAK AWEKLLSKYG GGPTLSKDDV CKECLKDVAK
0601: TAVSADVYRD RKASLKNLAE AALAGSIPEG PSYFISKTWL SHWLRRKNVD ITFDADKGPT SALRCSHGNL LPEHASGAKR VSVPESLWLF LYETIAKEAD
0701: DIVTFPSDTQ PCEICDHKLS AVASVEDSLR AVKLKQRQSH EKLISGKGFA LNPGQKYYLV PSSWLSEWRA YITATGKNVS SLPEPQSLEV AINSLKCEKH
0801: SRLLQRPLDI VYKRGGITQK TSNTDGLAII SESDWQSFSE EWNVAHADGA CAEIVFSKSS EDKPHESSEA MVILDKDPDQ FINGANGDSE DCRPYVRTDP
0901: EVCEECIGER ESCALVEKLN YQNEDIHVYL VRGKEAPKSI REASAALPVP DRRTSKRSRR TTTGNSISLK VSGSTTVYQL KLMIWESLGI VKENQKLHKG
1001: PLEIEEDFAT LADKCIFPGD VLWVKDSELF EDRDIADEIS EPKADALPAE EGFRGTLLTS SVSAQLCQDI VSSE
0101: ASTETPAGLT NLGATCYANS ILQCLYMNTS FRSGIFSLEP DILKKQPVLD QLARLFAQLH SSKMAFIDSA PFIKTLELDN GVQQDSHEFL TLFLSLLERS
0201: LSYSKVAVAK TIVQDLFRGS VSHVTRCSSC GRDSEASSKM EDFYELELNI KGLSNLEESL DDYLSVEALN GENQYSCESC QKRVDATRCI KLRSLPPVVN
0301: FQLKRYVFLP KTTTKKKISS SFSFPGQLDM GKRLSDPSSN YIYDLAAILI HKGSAANSGH YVAHIKDESN GHWWEFDDEC VSSLGFHPFG EKPGKSSDKA
0401: DRKSEGTSTE GSVANGNNSS HHEAAPTSNM GEMFSSTDAY MLMYKRSSKD ENGIKSNNIV EASNSSLPRH LMDEIDALNA SCVNECGEYL SKKDNLLASI
0501: QERRQEVKSV ITEAPATPDD DSYFWISLDW LRQWADNATP PSSIDNIPIQ CEHGKVPASK VTSMKRLSAK AWEKLLSKYG GGPTLSKDDV CKECLKDVAK
0601: TAVSADVYRD RKASLKNLAE AALAGSIPEG PSYFISKTWL SHWLRRKNVD ITFDADKGPT SALRCSHGNL LPEHASGAKR VSVPESLWLF LYETIAKEAD
0701: DIVTFPSDTQ PCEICDHKLS AVASVEDSLR AVKLKQRQSH EKLISGKGFA LNPGQKYYLV PSSWLSEWRA YITATGKNVS SLPEPQSLEV AINSLKCEKH
0801: SRLLQRPLDI VYKRGGITQK TSNTDGLAII SESDWQSFSE EWNVAHADGA CAEIVFSKSS EDKPHESSEA MVILDKDPDQ FINGANGDSE DCRPYVRTDP
0901: EVCEECIGER ESCALVEKLN YQNEDIHVYL VRGKEAPKSI REASAALPVP DRRTSKRSRR TTTGNSISLK VSGSTTVYQL KLMIWESLGI VKENQKLHKG
1001: PLEIEEDFAT LADKCIFPGD VLWVKDSELF EDRDIADEIS EPKADALPAE EGFRGTLLTS SVSAQLCQDI VSSE
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.