Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G111000.7 | Wheat | cytosol | 99.29 | 98.58 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 99.2 | 98.49 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 98.57 | 98.48 |
| Os12t0489200-01 | Rice | cytosol | 3.66 | 95.35 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 46.11 | 93.65 |
| EES15989 | Sorghum | cytosol | 93.12 | 92.87 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 88.92 | 89.08 |
| EES09985 | Sorghum | cytosol | 88.38 | 88.46 |
| Zm00001d041035_P002 | Maize | cytosol | 88.56 | 87.01 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 85.61 | 85.92 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 85.17 | 85.47 |
| Zm00001d023640_P004 | Maize | cytosol | 86.06 | 85.07 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 84.27 | 84.57 |
| GSMUA_Achr10P... | Banana | cytosol | 83.91 | 84.22 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 83.82 | 84.05 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 84.72 | 82.36 |
| Solyc11g006320.1.1 | Tomato | cytosol | 80.16 | 80.3 |
| TraesCS2A01G246800.3 | Wheat | golgi | 79.36 | 79.36 |
| Solyc05g055090.2.1 | Tomato | cytosol | 79.27 | 79.27 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 67.11 | 68.03 |
| Zm00001d052943_P023 | Maize | plastid | 76.23 | 63.7 |
| TraesCS3A01G176700.1 | Wheat | cytosol | 4.74 | 27.18 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 15.46 | 16.11 |
| TraesCS5A01G060400.1 | Wheat | nucleus | 14.75 | 14.69 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 14.03 | 11.94 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 14.75 | 11.89 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 15.91 | 10.74 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS5A01G105900 | EnsemblPlants:TraesCS5A01G105900.1 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd00121 | TIGR:cd02659 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:170833551..170863685
Molecular Weight (calculated)
131152.0 Da
IEP (calculated)
6.021
GRAVY (calculated)
-0.685
Length
1119 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMMTPSPLE QQQEDEEMLV PHQELSAADA AQPMEVVAQT EPTNTAESQA PEDPQTSRFT WTIENFTRVS GKKHYSDVFV VGGFKWRVLI FPKGNNVDHL
0101: SMYLDVADSG NLPYGWSRYA QFSLAIVNQI HQKYTARKDT QHQFNARESD WGFTSFMPLS ELYDPSRGYL VNDTVVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCHDVYA SFDKYVEVER LEGDNKYQAE QHGLQDARKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDKDDGKYLT PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLSDQW YKFDDERVTK EDTKKALEEQ YGGEEELPQV
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQQEKEHKKK EKAEAHLYTI IKVARDEDLK EQIGKNIYFD LVDHEKVRNF
0601: RIQKQLPFNS FKEEVAKEYG IPVQSQRFWL WAKRQNHTYR PNRPLAPHEE AQSVGQLREV SNKAHNAELK LFLEVELGLD LRPIRPPEKS KEDILLFFKL
0701: YNPEKEELRF VGRLFVKALG KPSDILTKLN EMAGFSPNEE IELYEEIKFE PNVMCEHIDK KLSFRSSQLE DGDIISFQKP SIPGGDTQVR YKDVPSFLEY
0801: VHNRQVVHFR CLEKPKEEGF CLELSKLHTY DDVVERVARQ LGLNDPSKVR LTSHNCYSQQ PKPQPIRYRG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QCLKTLKVAF HHATKDEVVI HSIRLSKNST ISDVITDLKT KVELSNPDAE LRLLEVFYHK IYKIFPPHEK IENINDQYWT LRAEEIPEEE KNLTAQDRLI
1001: HVYHFMKDPN QNQQIQNFGD PFLLVIREGE TAAEVMDRVQ KKLRVPNEEF AKWKVAFISM NRPEYLQDID AVSARFQRRD VYGAWEQYLG LEHTDTTPKR
1101: SYAANQNRHT YEKPVKIYN
0101: SMYLDVADSG NLPYGWSRYA QFSLAIVNQI HQKYTARKDT QHQFNARESD WGFTSFMPLS ELYDPSRGYL VNDTVVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCHDVYA SFDKYVEVER LEGDNKYQAE QHGLQDARKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDKDDGKYLT PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLSDQW YKFDDERVTK EDTKKALEEQ YGGEEELPQV
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQQEKEHKKK EKAEAHLYTI IKVARDEDLK EQIGKNIYFD LVDHEKVRNF
0601: RIQKQLPFNS FKEEVAKEYG IPVQSQRFWL WAKRQNHTYR PNRPLAPHEE AQSVGQLREV SNKAHNAELK LFLEVELGLD LRPIRPPEKS KEDILLFFKL
0701: YNPEKEELRF VGRLFVKALG KPSDILTKLN EMAGFSPNEE IELYEEIKFE PNVMCEHIDK KLSFRSSQLE DGDIISFQKP SIPGGDTQVR YKDVPSFLEY
0801: VHNRQVVHFR CLEKPKEEGF CLELSKLHTY DDVVERVARQ LGLNDPSKVR LTSHNCYSQQ PKPQPIRYRG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QCLKTLKVAF HHATKDEVVI HSIRLSKNST ISDVITDLKT KVELSNPDAE LRLLEVFYHK IYKIFPPHEK IENINDQYWT LRAEEIPEEE KNLTAQDRLI
1001: HVYHFMKDPN QNQQIQNFGD PFLLVIREGE TAAEVMDRVQ KKLRVPNEEF AKWKVAFISM NRPEYLQDID AVSARFQRRD VYGAWEQYLG LEHTDTTPKR
1101: SYAANQNRHT YEKPVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.