Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P02720_001 | Banana | cytosol | 91.31 | 94.26 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 90.27 | 93.18 |
| Os12t0489200-01 | Rice | cytosol | 3.39 | 90.7 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 84.88 | 87.62 |
| EES15989 | Sorghum | cytosol | 84.45 | 86.63 |
| GSMUA_Achr10P... | Banana | cytosol | 83.49 | 86.19 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 41.18 | 86.03 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 82.62 | 84.91 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 82.19 | 84.77 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 82.36 | 84.72 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 82.71 | 84.47 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 82.54 | 84.29 |
| TraesCS4D01G165800.1 | Wheat | unclear | 81.15 | 83.47 |
| EES09985 | Sorghum | cytosol | 81.06 | 83.45 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 80.71 | 83.17 |
| Zm00001d041035_P002 | Maize | cytosol | 80.89 | 81.74 |
| Solyc11g006320.1.1 | Tomato | cytosol | 79.15 | 81.56 |
| Solyc05g055090.2.1 | Tomato | cytosol | 78.11 | 80.34 |
| Zm00001d023640_P004 | Maize | cytosol | 78.63 | 79.95 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 74.37 | 76.57 |
| Zm00001d052943_P023 | Maize | plastid | 70.89 | 60.94 |
| GSMUA_Achr6P14230_001 | Banana | cytosol | 9.21 | 48.62 |
| GSMUA_Achr11P... | Banana | nucleus | 15.99 | 16.85 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 14.16 | 15.15 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 4.87 | 12.36 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 13.9 | 11.33 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 9.99 | 8.75 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 5.3 | 7.25 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSMUA_Achr4G22710_001 | EnsemblPlants:GSMUA_Achr4P22710_001 | EnsemblPlants:GSMUA_Achr4T22710_001 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:IPR028889 | UniProt:M0SR83 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 |
| PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 |
| PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 |
| SUPFAM:SSF54001 | InterPro:TRAF-like | UniParc:UPI000294AAAF | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 12 [Source:GMGC_GENE;Acc:GSMUA_Achr4G22710_001]
Coordinates
chr4:+:22961458..22989488
Molecular Weight (calculated)
135088.0 Da
IEP (calculated)
5.866
GRAVY (calculated)
-0.604
Length
1151 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMMTPPPLD VPLIFVPLFL QQEDEEMLVP HQEFPEGPQP MEVIPNEMGT APESQQVEDP PSFKFRWTIE NFSRLNIKKL YSDIFYVGGY KWRVLIFPKG
0101: NNVDHLSIYL DVADSATLPY GWSRYAQFAL AVVNQIHSKY TIRKDTQHQF NSRESDWGFT SFMSLSELYD PSRGYLVNDT CVIEAEVVVR RVVDYWSYDS
0201: KKETGFVGLK NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDMPSGSI PLALQSLFYK LQYSDNSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK
0301: LEDKMKGTVV EGTIQHLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CRDVYASFDK YVEVERLEGD NKYHAENHGL QDAKKGVLFI DFPPVLQLQL
0401: KRFEYDFMRD TMVKINDRYE FPLQLDLDSD NGKYLSPEAD RRVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWFKFD DERVTKEDAK RALEEQYGGE
0501: EELPQTNPGF NNTPFKFTKY SNAYMLVYIR ESDKEKIMCD VDEKDIAEHL RIRLKKEQEE KENKKKEKAE AHLYTIIKVA RNEDLAEQIG KEIFFDLVDH
0601: DKVRNFRVQK QLPFSHFKEE VAKEFGIPVQ FHRFWLWAKR QNHTYRPNRP LTPQEEAQPV GQLREVSNKA HNAELKLFLE VELGPDLCPV PPPSKTKEEI
0701: LLFFKLYDPE KEELRFVGRL FLKSLGKPIE VLTKLNEMAG FPPNEEIELY EVGFSFEVLI LFLANLYITR KKKVSQEIKF EPNVMCEHID KRISFRSSQI
0801: EDGDIICYQR ASALGNEDQY RYPDVPSFLE YVHNRQVVHF RSLEKPKEDD FSLELSKMFT YDDVVERVAH QLGVDDPSKI RLTSHNCYSQ QPKPQPIKYR
0901: GVDHLSDMLV HYNQTSDILY YEVLDIPLPE LQGLKTLKVA FHHATKDEVA VHSIRLPKNS TVADVINDLR TKVELSHPDA ELRLLEVFYH KIYKIFPPGE
1001: KIENINDQYW TLRAEEIPEE EKNLSPHDRL IHVYHFTKDP NQNQTQVQNF GEPFFMVIRE GETLADVKIR IQKKLQVPEE DFSKWQLAFV ALGRPEYLQD
1101: SDIVSNRFQR RDIYGAWEQY LGLEHSDTAP KRAYTANQNR HTFEKPVKIY N
0101: NNVDHLSIYL DVADSATLPY GWSRYAQFAL AVVNQIHSKY TIRKDTQHQF NSRESDWGFT SFMSLSELYD PSRGYLVNDT CVIEAEVVVR RVVDYWSYDS
0201: KKETGFVGLK NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDMPSGSI PLALQSLFYK LQYSDNSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK
0301: LEDKMKGTVV EGTIQHLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CRDVYASFDK YVEVERLEGD NKYHAENHGL QDAKKGVLFI DFPPVLQLQL
0401: KRFEYDFMRD TMVKINDRYE FPLQLDLDSD NGKYLSPEAD RRVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWFKFD DERVTKEDAK RALEEQYGGE
0501: EELPQTNPGF NNTPFKFTKY SNAYMLVYIR ESDKEKIMCD VDEKDIAEHL RIRLKKEQEE KENKKKEKAE AHLYTIIKVA RNEDLAEQIG KEIFFDLVDH
0601: DKVRNFRVQK QLPFSHFKEE VAKEFGIPVQ FHRFWLWAKR QNHTYRPNRP LTPQEEAQPV GQLREVSNKA HNAELKLFLE VELGPDLCPV PPPSKTKEEI
0701: LLFFKLYDPE KEELRFVGRL FLKSLGKPIE VLTKLNEMAG FPPNEEIELY EVGFSFEVLI LFLANLYITR KKKVSQEIKF EPNVMCEHID KRISFRSSQI
0801: EDGDIICYQR ASALGNEDQY RYPDVPSFLE YVHNRQVVHF RSLEKPKEDD FSLELSKMFT YDDVVERVAH QLGVDDPSKI RLTSHNCYSQ QPKPQPIKYR
0901: GVDHLSDMLV HYNQTSDILY YEVLDIPLPE LQGLKTLKVA FHHATKDEVA VHSIRLPKNS TVADVINDLR TKVELSHPDA ELRLLEVFYH KIYKIFPPGE
1001: KIENINDQYW TLRAEEIPEE EKNLSPHDRL IHVYHFTKDP NQNQTQVQNF GEPFFMVIRE GETLADVKIR IQKKLQVPEE DFSKWQLAFV ALGRPEYLQD
1101: SDIVSNRFQR RDIYGAWEQY LGLEHSDTAP KRAYTANQNR HTFEKPVKIY N
0001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.