Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G163000.1 | Wheat | cytosol | 98.48 | 98.66 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 44.86 | 91.11 |
| Os12t0489200-01 | Rice | cytosol | 3.49 | 90.7 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 90.53 | 90.61 |
| EES15989 | Sorghum | cytosol | 89.99 | 89.75 |
| EES09985 | Sorghum | cytosol | 89.63 | 89.71 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 89.63 | 89.0 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 85.08 | 85.38 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 84.72 | 85.02 |
| Zm00001d041035_P002 | Maize | cytosol | 86.33 | 84.81 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 84.36 | 84.66 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 84.27 | 84.5 |
| GSMUA_Achr10P... | Banana | cytosol | 83.82 | 84.13 |
| Zm00001d023640_P004 | Maize | cytosol | 83.29 | 82.33 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 83.47 | 81.15 |
| TraesCS2D01G249100.1 | Wheat | nucleus | 80.43 | 80.43 |
| Solyc11g006320.1.1 | Tomato | cytosol | 79.62 | 79.77 |
| Solyc05g055090.2.1 | Tomato | cytosol | 78.73 | 78.73 |
| TraesCS3D01G307100.1 | Wheat | cytosol | 66.4 | 67.3 |
| Zm00001d052943_P023 | Maize | plastid | 77.03 | 64.38 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 16.18 | 16.85 |
| TraesCS5D01G072000.1 | Wheat | nucleus | 14.39 | 14.34 |
| TraesCS3D01G310000.1 | Wheat | nucleus | 14.39 | 12.52 |
| TraesCS1D01G327700.1 | Wheat | nucleus | 14.39 | 11.6 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 16.09 | 10.83 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS4D01G165800 | EnsemblPlants:TraesCS4D01G165800.1 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd00121 | TIGR:cd02659 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:277371128..277424482
Molecular Weight (calculated)
130907.0 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.639
Length
1119 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTIMTPAPLE ENDEMLVAHQ ELATADADTA QPMEAVVAQT EAASTAESQP SEDPQTSRFT WTIASFTRLN GKKHYSDVFV VGGYKWRVLI FPKGNNVEHL
0101: SMYLDVADSA NLPYGWSRSA QFSLSVVNQI DQKYTTRKDT QHQFSARESD WGFTSFMPLS ELYDPSRGYL VNDTIVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVER LEGDNKYHAE NHGLQDAKKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDRDDGKYLA PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLADQW YKFDDERVTK EDTKKAFEEQ YGGEEELPQI
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQEEKEHKKK EKAEAHLYTI IKIARDEDLK EQTGKDIYFD LVDHEKVRSF
0601: RIQKQLPFST FKEEVAKEYG IPVQFQRFWL WAKRQNHTYR PNRPLNPHEE MQSVGQLREI SNKAQNAELK LFLEVEFGLD LQPLPPPEKS KEDILLFFKL
0701: YNPEKEVLCF VGRLFVKALG KPSDILRKLT EMAGFTPDEE IELYEEIKFE PNVMCEHIDK KLTFRASQLE DGDIVCFQKS PKADSGTQVR YPDIPSFLEY
0801: VHNRQVVHFR SLEKPKDDEF CLELSKLHTY DDVVERVARQ LGLDDPAKIR LTSHNCYSQQ PKPQPIRYQG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QFLKTLKVAF HHATKEEVVI HSIRLPKNST IADVIIDLKT KVDLSSPTAE LRVLEVFYHK IYKIFPLHEK IENINDQYWT LRAEEVPEEE KNPSQHDRLI
1001: HVYHFTKDPL QNQQIQNFGD PFFLAICEGE TLAEVKGRIQ RKLQVPDEEF SKWKFAFISM NRPDYLQDSD VVSARFQRRD VYGAWEQYLG LEHTDTAPKR
1101: AYTANQNRHT HEKPVRIYN
0101: SMYLDVADSA NLPYGWSRSA QFSLSVVNQI DQKYTTRKDT QHQFSARESD WGFTSFMPLS ELYDPSRGYL VNDTIVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVER LEGDNKYHAE NHGLQDAKKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDRDDGKYLA PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLADQW YKFDDERVTK EDTKKAFEEQ YGGEEELPQI
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQEEKEHKKK EKAEAHLYTI IKIARDEDLK EQTGKDIYFD LVDHEKVRSF
0601: RIQKQLPFST FKEEVAKEYG IPVQFQRFWL WAKRQNHTYR PNRPLNPHEE MQSVGQLREI SNKAQNAELK LFLEVEFGLD LQPLPPPEKS KEDILLFFKL
0701: YNPEKEVLCF VGRLFVKALG KPSDILRKLT EMAGFTPDEE IELYEEIKFE PNVMCEHIDK KLTFRASQLE DGDIVCFQKS PKADSGTQVR YPDIPSFLEY
0801: VHNRQVVHFR SLEKPKDDEF CLELSKLHTY DDVVERVARQ LGLDDPAKIR LTSHNCYSQQ PKPQPIRYQG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QFLKTLKVAF HHATKEEVVI HSIRLPKNST IADVIIDLKT KVDLSSPTAE LRVLEVFYHK IYKIFPLHEK IENINDQYWT LRAEEVPEEE KNPSQHDRLI
1001: HVYHFTKDPL QNQQIQNFGD PFFLAICEGE TLAEVKGRIQ RKLQVPDEEF SKWKFAFISM NRPDYLQDSD VVSARFQRRD VYGAWEQYLG LEHTDTAPKR
1101: AYTANQNRHT HEKPVRIYN
0001: MTMMTPPPVD PEDEEMLVPN SDLVDGPAQP MEVTQPETAA STVENQPAED PPTLKFTWTI PNFSRQNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.