Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15989 | Sorghum | cytosol | 90.81 | 91.62 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 85.34 | 86.25 |
| Zm00001d041035_P002 | Maize | cytosol | 86.75 | 86.22 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 85.07 | 86.06 |
| Os12t0489200-01 | Rice | cytosol | 3.27 | 86.05 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 85.6 | 85.98 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 85.25 | 85.63 |
| TraesCS4D01G165800.1 | Wheat | unclear | 82.33 | 83.29 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 40.46 | 83.12 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 81.98 | 83.08 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 80.57 | 81.79 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 79.95 | 81.17 |
| GSMUA_Achr10P... | Banana | cytosol | 78.53 | 79.73 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 78.45 | 79.64 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 77.65 | 78.76 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 79.95 | 78.63 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 75.97 | 76.92 |
| Solyc11g006320.1.1 | Tomato | cytosol | 74.73 | 75.74 |
| Solyc05g055090.2.1 | Tomato | cytosol | 73.59 | 74.44 |
| Zm00001d007904_P003 | Maize | cytosol | 73.67 | 71.83 |
| Zm00001d018859_P010 | Maize | cytosol | 70.67 | 71.24 |
| Zm00001d043312_P001 | Maize | nucleus | 62.19 | 63.03 |
| Zm00001d052943_P023 | Maize | plastid | 71.29 | 60.27 |
| Zm00001d030958_P001 | Maize | nucleus | 8.83 | 21.93 |
| Zm00001d028177_P004 | Maize | cytosol | 14.13 | 14.91 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 14.31 | 14.88 |
| Zm00001d030960_P003 | Maize | nucleus | 14.4 | 14.5 |
| Zm00001d041395_P002 | Maize | nucleus | 13.87 | 14.13 |
| Zm00001d043294_P006 | Maize | nucleus | 14.66 | 12.97 |
| Zm00001d038655_P003 | Maize | nucleus | 14.05 | 12.23 |
| Zm00001d010716_P002 | Maize | nucleus | 12.19 | 10.49 |
| Zm00001d034390_P001 | Maize | nucleus | 2.3 | 10.08 |
| Zm00001d051075_P002 | Maize | nucleus | 14.58 | 9.75 |
Protein Annotations
| EntrezGene:100383306 | MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 |
| UniProt:A0A1D6IUI3 | ProteinID:AQK39699.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 |
| PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 |
| PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 |
| InterPro:TRAF-like | UniParc:UPI00084477C8 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom |
| EnsemblPlantsGene:Zm00001d023640 | EnsemblPlants:Zm00001d023640_P004 | EnsemblPlants:Zm00001d023640_T004 | SEG:seg | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 13
Coordinates
chr10:-:13317591..13341556
Molecular Weight (calculated)
133046.0 Da
IEP (calculated)
6.339
GRAVY (calculated)
-0.645
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMMTPPPLE QQQGDEMLVP HQELPVAGPE PAPQPMEVVA QTEPANTAET QPPEDPQTSR FTWTIESFSR LNTKKHYSDA FVVGGYKWRV LIFPKGNNVD
0101: HLSLYLDVAD SGSLPYGWSR YAQFSLAVVN QVHPKYTIRK DTQHQFNARE SDWGFTSFMP LSDLYDPNRG YLVNDTVVIE AEVAVRRMVD YWTYDSKKET
0201: GFVGLKNQGA TCYMNSLLQT LYHTPYFRKA VYHMPTTEND MPSGSIPLAL QSLFYKLQYS DNSVATKELT KSFGWDTYDS FMQHDVQELN RVLYLQLDVK
0301: GCRDVYASFD KYVEVEHLEG DNKYHAEQYG LQDARKGVLF LDFPPVLQLQ LKRFEYDYMR DTMVKINDRY EFPLQLDLDR DNGKYLAPDA DRNRIHFFYA
0401: DVACIFFLFS VLVHSGGVHG GHYYAFIRPT LSDQWYKFDD ERVTKEDTKK ALEEQYGGEE ELPQINPGFN NTPFKFTKYS NAYMLVYIRE SDKEKIMCNV
0501: DEKDIAEHLR IRLKKEQEEK EHKKKEKAEA HLYTIIKIAR DEDLKEQIGK NIYFDLVDHE KVHSFRIQKQ LPFTSFKEEV AKEFGIPVQF QRFWLWAKRQ
0601: NHTYRPNRPL TPHEEAQSVG QLREVSNKAH NAELKLFLEV ELGPELCPIR PPEKSKEDIL LFFKLYNAEK EELHFVGRLF VKALGKPSEI LTKLNAMAGF
0701: SPNEEIELYE EIKFEPNVMC EHIDKKLTFR SSQLEDGDII CFQKAPVPDG DAQVRYPDVP SFLEYVHNRQ VVHFRCLDKP KDDDFSLELS KLHTYDDVVE
0801: RVAHQLGLDD PSKIRLTSHN CYSQQPKPQP IRYRGVAHLL DMLVHYNQTS DILYYEVLDI PLPDLQRLKT LKVAFHHATK DEVVVHSIRL PRNSTISDVI
0901: TDLKTKVELS NPDAELRLLE VFYHKIYKIF PPHEKIENIN DQYWTLRAEE IPEEEKNLGP HDRLIHVYHF MKDPNQNQQI QNFGDPFLMV IREGETAAEV
1001: MERIQRKLRV PDDEFSKWKL AFISMNRPEY LQDTDVRRDV YGAWEQYLGL EHTDTTSKRS YTSNQNRHTY EKPLWEQWQR LYNGFGIILR AVEKRTRITR
1101: SDSRVLRPVK QNLLKLTYPL YQKGRLQVFY YT
0101: HLSLYLDVAD SGSLPYGWSR YAQFSLAVVN QVHPKYTIRK DTQHQFNARE SDWGFTSFMP LSDLYDPNRG YLVNDTVVIE AEVAVRRMVD YWTYDSKKET
0201: GFVGLKNQGA TCYMNSLLQT LYHTPYFRKA VYHMPTTEND MPSGSIPLAL QSLFYKLQYS DNSVATKELT KSFGWDTYDS FMQHDVQELN RVLYLQLDVK
0301: GCRDVYASFD KYVEVEHLEG DNKYHAEQYG LQDARKGVLF LDFPPVLQLQ LKRFEYDYMR DTMVKINDRY EFPLQLDLDR DNGKYLAPDA DRNRIHFFYA
0401: DVACIFFLFS VLVHSGGVHG GHYYAFIRPT LSDQWYKFDD ERVTKEDTKK ALEEQYGGEE ELPQINPGFN NTPFKFTKYS NAYMLVYIRE SDKEKIMCNV
0501: DEKDIAEHLR IRLKKEQEEK EHKKKEKAEA HLYTIIKIAR DEDLKEQIGK NIYFDLVDHE KVHSFRIQKQ LPFTSFKEEV AKEFGIPVQF QRFWLWAKRQ
0601: NHTYRPNRPL TPHEEAQSVG QLREVSNKAH NAELKLFLEV ELGPELCPIR PPEKSKEDIL LFFKLYNAEK EELHFVGRLF VKALGKPSEI LTKLNAMAGF
0701: SPNEEIELYE EIKFEPNVMC EHIDKKLTFR SSQLEDGDII CFQKAPVPDG DAQVRYPDVP SFLEYVHNRQ VVHFRCLDKP KDDDFSLELS KLHTYDDVVE
0801: RVAHQLGLDD PSKIRLTSHN CYSQQPKPQP IRYRGVAHLL DMLVHYNQTS DILYYEVLDI PLPDLQRLKT LKVAFHHATK DEVVVHSIRL PRNSTISDVI
0901: TDLKTKVELS NPDAELRLLE VFYHKIYKIF PPHEKIENIN DQYWTLRAEE IPEEEKNLGP HDRLIHVYHF MKDPNQNQQI QNFGDPFLMV IREGETAAEV
1001: MERIQRKLRV PDDEFSKWKL AFISMNRPEY LQDTDVRRDV YGAWEQYLGL EHTDTTSKRS YTSNQNRHTY EKPLWEQWQR LYNGFGIILR AVEKRTRITR
1101: SDSRVLRPVK QNLLKLTYPL YQKGRLQVFY YT
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.