Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G111000.7 | Wheat | cytosol | 99.47 | 99.47 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 98.49 | 99.2 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 97.96 | 98.57 |
| Os12t0489200-01 | Rice | cytosol | 3.73 | 97.67 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 45.61 | 93.28 |
| EES15989 | Sorghum | cytosol | 92.55 | 92.96 |
| TraesCS4D01G165800.1 | Wheat | unclear | 89.0 | 89.63 |
| EES09985 | Sorghum | cytosol | 87.84 | 88.55 |
| Zm00001d041035_P002 | Maize | cytosol | 88.02 | 87.09 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 85.18 | 86.1 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 84.92 | 85.83 |
| Zm00001d023640_P004 | Maize | cytosol | 85.63 | 85.25 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 83.94 | 84.84 |
| GSMUA_Achr10P... | Banana | cytosol | 83.32 | 84.22 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 83.05 | 83.87 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 84.29 | 82.54 |
| Solyc11g006320.1.1 | Tomato | cytosol | 79.59 | 80.3 |
| Solyc05g055090.2.1 | Tomato | cytosol | 78.97 | 79.54 |
| TraesCS2D01G249100.1 | Wheat | nucleus | 78.88 | 79.45 |
| TraesCS3D01G307100.1 | Wheat | cytosol | 66.55 | 67.93 |
| Zm00001d052943_P023 | Maize | plastid | 75.87 | 63.85 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 15.53 | 16.29 |
| TraesCS5D01G072000.1 | Wheat | nucleus | 14.64 | 14.69 |
| TraesCS3D01G310000.1 | Wheat | nucleus | 14.11 | 12.36 |
| TraesCS1D01G327700.1 | Wheat | nucleus | 14.55 | 11.82 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 15.88 | 10.77 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS5D01G123300 | EnsemblPlants:TraesCS5D01G123300.4 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd00121 | TIGR:cd02659 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:181608152..181633180
Molecular Weight (calculated)
132110.0 Da
IEP (calculated)
5.885
GRAVY (calculated)
-0.671
Length
1127 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMMTPSPLE QQEDEEMLVP HQELSTADAA QPMEVVAQTE PTNTAESQAP EDPQTSRFTW TIENFTRVSG KKHYSDVFVV GGFKWRVLIF PKGNNVDHLS
0101: MYLDVADSGN LPYGWSRYAQ FSLAIVNQIH QKYTARKGCM LVPCLADTQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVVVEAEVA VRKMIDYWTY
0201: DSKKETGYVG LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPSG SIPLALQSLF YKLQYSDNSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC
0301: EKLEDKMKGT VVEGTIEQLF EGHHINYIEC INVDYKSNRK ESFYDLQLDV KGCRDVYASF DKYVEVERLE GDNKYQAEQH GLQDARKGVL FLDFPPVLQL
0401: QLKRFEYDYM RDTMVKINDR YEFPLQLDLD KDDGKYLTPD ADRSIRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED TKKALEEQYG
0501: GEEELPQVNP GFNNTPFKFT KYSNAYMLVY IRESDKEKIM CNVDEKDIAE HLRIRLKKEQ EEKEHKKKEK AEAHLYTIIK VARDEDLKEQ IGKNIYFDLV
0601: DHEKVRNFRI QKQLPFNSFK EEVAKEYGIP VQSQRFWLWA KRQNHTYRPN RPLAPHEEAQ SVGQLREVSN KAHNAELKLF LEVELGLDLR PIRPPEKSKE
0701: DILLFFKLYN PEKEELRFVG RLFVKALGKP SDILTKLNEM AGFSPNEEIE LYEEIKFEPN VMCEHIDKKL SFRSSQLEDG DIISFQKPSI PGGDTQVRYK
0801: DVPSFLEYVH NRQVVHFRCL EKPKEEEFCL ELSKLHTYDD VVERVARQLG LDDPSKVRLT SHNCYSQQPK PQPIRYRGVE HLLDMLVHYN QTSDILYYEV
0901: LDIPLPELQC LKTLKVAFHH ATKDEVVIHS IRLSKNSTIS DVITDLKTKV ELSNPDTELR LLEVFYHKIY KIFPPHEKIE NINDQYWTLR AEEIPEEEKN
1001: LTAQDRLIHV YHFMKDPNQN QQIQNFGDPF LLVIREGETA AEVMDRVQKK LRVPNEEFAK WKVAFISMNR PEYLQDIDAV SARFQRRDVY GAWEQYLGLE
1101: HTDTTPKRSY TANQNRHTYE KPVKIYN
0101: MYLDVADSGN LPYGWSRYAQ FSLAIVNQIH QKYTARKGCM LVPCLADTQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVVVEAEVA VRKMIDYWTY
0201: DSKKETGYVG LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPSG SIPLALQSLF YKLQYSDNSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC
0301: EKLEDKMKGT VVEGTIEQLF EGHHINYIEC INVDYKSNRK ESFYDLQLDV KGCRDVYASF DKYVEVERLE GDNKYQAEQH GLQDARKGVL FLDFPPVLQL
0401: QLKRFEYDYM RDTMVKINDR YEFPLQLDLD KDDGKYLTPD ADRSIRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED TKKALEEQYG
0501: GEEELPQVNP GFNNTPFKFT KYSNAYMLVY IRESDKEKIM CNVDEKDIAE HLRIRLKKEQ EEKEHKKKEK AEAHLYTIIK VARDEDLKEQ IGKNIYFDLV
0601: DHEKVRNFRI QKQLPFNSFK EEVAKEYGIP VQSQRFWLWA KRQNHTYRPN RPLAPHEEAQ SVGQLREVSN KAHNAELKLF LEVELGLDLR PIRPPEKSKE
0701: DILLFFKLYN PEKEELRFVG RLFVKALGKP SDILTKLNEM AGFSPNEEIE LYEEIKFEPN VMCEHIDKKL SFRSSQLEDG DIISFQKPSI PGGDTQVRYK
0801: DVPSFLEYVH NRQVVHFRCL EKPKEEEFCL ELSKLHTYDD VVERVARQLG LDDPSKVRLT SHNCYSQQPK PQPIRYRGVE HLLDMLVHYN QTSDILYYEV
0901: LDIPLPELQC LKTLKVAFHH ATKDEVVIHS IRLSKNSTIS DVITDLKTKV ELSNPDTELR LLEVFYHKIY KIFPPHEKIE NINDQYWTLR AEEIPEEEKN
1001: LTAQDRLIHV YHFMKDPNQN QQIQNFGDPF LLVIREGETA AEVMDRVQKK LRVPNEEFAK WKVAFISMNR PEYLQDIDAV SARFQRRDVY GAWEQYLGLE
1101: HTDTTPKRSY TANQNRHTYE KPVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.