Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 86.03 | 86.19 |
| Solyc05g055090.2.1 | Tomato | cytosol | 85.59 | 85.43 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 83.26 | 83.41 |
| GSMUA_Achr10P... | Banana | cytosol | 81.65 | 81.79 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 81.47 | 81.61 |
| Os12t0489200-01 | Rice | cytosol | 3.13 | 81.4 |
| EES15989 | Sorghum | cytosol | 81.56 | 81.19 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 39.93 | 80.94 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 80.3 | 80.16 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 80.3 | 80.09 |
| Solyc11g071700.1.1 | Tomato | cytosol, plastid | 79.59 | 80.02 |
| EES09985 | Sorghum | cytosol | 80.04 | 79.96 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 80.3 | 79.95 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 80.39 | 79.68 |
| TraesCS4D01G165800.1 | Wheat | unclear | 79.77 | 79.62 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 80.3 | 79.59 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 79.32 | 79.32 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 81.56 | 79.15 |
| Zm00001d041035_P002 | Maize | cytosol | 77.98 | 76.47 |
| Zm00001d023640_P004 | Maize | cytosol | 75.74 | 74.73 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 73.86 | 73.79 |
| Solyc06g073820.1.1 | Tomato | cytosol | 65.8 | 64.76 |
| Zm00001d052943_P023 | Maize | plastid | 69.74 | 58.18 |
| Solyc05g055100.1.1 | Tomato | endoplasmic reticulum | 22.56 | 35.64 |
| Solyc06g053740.2.1 | Tomato | cytosol | 8.59 | 23.08 |
| Solyc03g078390.2.1 | Tomato | nucleus | 15.31 | 15.67 |
| Solyc09g089560.2.1 | Tomato | nucleus | 15.4 | 15.58 |
| Solyc03g005430.2.1 | Tomato | nucleus | 15.4 | 14.97 |
| Solyc06g053750.2.1 | Tomato | nucleus | 15.13 | 14.85 |
| Solyc06g017970.2.1 | Tomato | nucleus | 16.11 | 10.64 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | UniProt:K4D4P5 |
| InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 |
| ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc11g006320.1 | EnsemblPlants:Solyc11g006320.1.1 |
| InterPro:TRAF-like | UniParc:UPI0002769DC4 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:1032998..1053714
Molecular Weight (calculated)
130427.0 Da
IEP (calculated)
5.537
GRAVY (calculated)
-0.631
Length
1117 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTLMTPPPVE QPEDEEMLVP NSDFPVEGPQ PMEVATADTA STVEGPQVDD PPSGRFAWTI EKFSRLNVKK LYSEVFNVGG YKWRILIFPK GNNADQLSLY
0101: LDVADSPSLP YGWSRYAHFS LGVLNQAHTK FTVRKDTQHQ FNARESDWGF TSFMPLSELY DPSRGFIMDD TVIVEADVSV RKVADYWSHD SKKETGCVGL
0201: KNQGATCYMN SLLQTLYHIS YFRKAVYHMP TTENDNPSGS IPLALQSLFY KLQYSDTSVA TKELTKSFGW DSNDSFTQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDYRSTRKE SFYDLQLDVK GCRDIYASFD KYVEVERLEG DNKYHAEKYG LQDARKGVLF VDFPPVLQLQ LKRFEYDFAR
0401: DTMVKINDRY EFPLQLDLDR ENGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAYIR PTLSDQWFKF DDERVTKEDP KRALEEQYGG EEELPHTNPA
0501: FNNSPFKFTK YSNAYMLVYI RESDKEKIIC NVDEKDIAEH LRVRLKKEQD EKEQKRKEKA EAHLYTIIKV ARDEDLGEQI GKEIYFDLLD HDKVRSFRIQ
0601: KQMVFTQFKE EVAKVLGIPV QFQRYWLWAK RQNHTYRPNR PLTPQEEVQS VGQLREVSNK TSNAELKLYL EVEVGLDLQP CPPPEKTKED ILLFFKLYDP
0701: LKEEIRYVGR LFVKGSGKPL DILSKLNELA GFSPDEEIEL FEEIKFEPNV MCEPIDCNLT FCSSQLEDGD IICFQKPVQS QTSEQCRFSD VPSFLEYVHN
0801: RQVVHFRSLE KPKEEDFSLE LSKLNTYDEV VESLARHLRL DDPSKIRLTS HNCYSQQPKP QPIKYRGVDR LTEMLVHYNQ TSDILYYEVL DIPLPELQCL
0901: KTLKVAFYNA AKYEVTIHTI RLPKQSTVDD VLNHLKTKVE LSRPDAELRL LEVFYHKIYK IFPPTERIEN INDQYWTLRA EEIPEEEKNL GPLDRLIHVY
1001: HFTKDTTQNQ AHVQNFGEPF FLVIHEGETL AEVKVRIQRK LQVPHEEFSK WAFAFVSMGR PDYLRDSDIV SIRFQRRDVY GAWEQYLGLE HADNGPKRSY
1101: ASNQNRPTFD KPVRIYN
0101: LDVADSPSLP YGWSRYAHFS LGVLNQAHTK FTVRKDTQHQ FNARESDWGF TSFMPLSELY DPSRGFIMDD TVIVEADVSV RKVADYWSHD SKKETGCVGL
0201: KNQGATCYMN SLLQTLYHIS YFRKAVYHMP TTENDNPSGS IPLALQSLFY KLQYSDTSVA TKELTKSFGW DSNDSFTQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDYRSTRKE SFYDLQLDVK GCRDIYASFD KYVEVERLEG DNKYHAEKYG LQDARKGVLF VDFPPVLQLQ LKRFEYDFAR
0401: DTMVKINDRY EFPLQLDLDR ENGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAYIR PTLSDQWFKF DDERVTKEDP KRALEEQYGG EEELPHTNPA
0501: FNNSPFKFTK YSNAYMLVYI RESDKEKIIC NVDEKDIAEH LRVRLKKEQD EKEQKRKEKA EAHLYTIIKV ARDEDLGEQI GKEIYFDLLD HDKVRSFRIQ
0601: KQMVFTQFKE EVAKVLGIPV QFQRYWLWAK RQNHTYRPNR PLTPQEEVQS VGQLREVSNK TSNAELKLYL EVEVGLDLQP CPPPEKTKED ILLFFKLYDP
0701: LKEEIRYVGR LFVKGSGKPL DILSKLNELA GFSPDEEIEL FEEIKFEPNV MCEPIDCNLT FCSSQLEDGD IICFQKPVQS QTSEQCRFSD VPSFLEYVHN
0801: RQVVHFRSLE KPKEEDFSLE LSKLNTYDEV VESLARHLRL DDPSKIRLTS HNCYSQQPKP QPIKYRGVDR LTEMLVHYNQ TSDILYYEVL DIPLPELQCL
0901: KTLKVAFYNA AKYEVTIHTI RLPKQSTVDD VLNHLKTKVE LSRPDAELRL LEVFYHKIYK IFPPTERIEN INDQYWTLRA EEIPEEEKNL GPLDRLIHVY
1001: HFTKDTTQNQ AHVQNFGEPF FLVIHEGETL AEVKVRIQRK LQVPHEEFSK WAFAFVSMGR PDYLRDSDIV SIRFQRRDVY GAWEQYLGLE HADNGPKRSY
1101: ASNQNRPTFD KPVRIYN
0001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.