Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 79.66 | 80.04 |
| KRH52412 | Soybean | nucleus | 77.17 | 77.72 |
| KRH61745 | Soybean | nucleus | 43.88 | 75.79 |
| KRH61744 | Soybean | cytosol | 28.15 | 74.26 |
| AT2G25330.1 | Thale cress | nucleus | 29.8 | 72.73 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 69.78 | 70.49 |
| CDY11532 | Canola | nucleus, plastid | 68.6 | 70.22 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 69.01 | 70.13 |
| CDY58924 | Canola | nucleus, plastid | 68.3 | 69.83 |
| CDX76975 | Canola | nucleus, plastid | 66.88 | 69.09 |
| Bra034251.1-P | Field mustard | nucleus | 66.65 | 68.43 |
| CDY35362 | Canola | nucleus, plastid | 66.59 | 68.37 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 51.33 | 66.06 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 31.58 | 63.5 |
| Os02t0613400-01 | Rice | extracellular | 11.06 | 63.39 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 16.14 | 60.26 |
| EES07147 | Sorghum | nucleus, plastid | 58.55 | 59.46 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 58.13 | 59.15 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 57.95 | 59.14 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 57.95 | 58.97 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 57.72 | 58.37 |
| Zm00001d051075_P002 | Maize | nucleus | 57.84 | 57.77 |
| VIT_11s0016g05880.t01 | Wine grape | mitochondrion | 49.38 | 55.04 |
| Solyc11g006320.1.1 | Tomato | cytosol | 10.64 | 16.11 |
| Solyc05g055090.2.1 | Tomato | cytosol | 10.53 | 15.91 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 10.47 | 15.78 |
| Solyc11g071700.1.1 | Tomato | cytosol, plastid | 10.17 | 15.48 |
| Solyc06g073820.1.1 | Tomato | cytosol | 9.64 | 14.36 |
| Solyc06g053740.2.1 | Tomato | cytosol | 3.31 | 13.46 |
| Solyc03g005430.2.1 | Tomato | nucleus | 7.63 | 11.23 |
| Solyc09g089560.2.1 | Tomato | nucleus | 7.16 | 10.96 |
| Solyc06g053750.2.1 | Tomato | nucleus | 7.27 | 10.81 |
| Solyc03g078390.2.1 | Tomato | nucleus | 6.74 | 10.45 |
| Solyc05g055100.1.1 | Tomato | endoplasmic reticulum | 4.32 | 10.33 |
Protein Annotations
| EnsemblPlants:Solyc06g017970.2.1 | EnsemblPlantsGene:Solyc06g017970.2 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR24007 |
| PANTHER:PTHR24007:SF6 | PFAM:PF00917 | PFscan:PS50144 | SEG:seg | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI0002767484 | UniProt:K4C4C3 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:15689687..15707295
Molecular Weight (calculated)
189533.0 Da
IEP (calculated)
5.670
GRAVY (calculated)
-0.375
Length
1691 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKNSRNHHSA IETAVSSSSS AEQSHPAVAP PSMTSSPATS SSEKPTAPVE DVAASRDPTS VTAAVAEFVT VERRSAYGAV CKWAIANFTR VKARALWSKY
0101: FEVGGFDCRL LVYPKGDSQA LPGYISVYLQ IMDPRNTTSS KWDCFASYRL AIDNPTDSSK SIHRDSWHRF SSKKKSHGWC DFTPSNSILD PKLGFLFNND
0201: CILITADILI LNESVSFSRD NNELQSNSLS NVVVTASSGD VLSGKFTWKV HNFSLFKEMI KTQKIMSPVF PAGECNLRIS VYQSAVNGVE YLSMCLESKD
0301: TEKTLISDRS CWCLFRMSVL NQKPGLNHMH RDSYGRFAAD NKSGDNTSLG WNDYMKMVDF MGSDSGFLVD DTAVFSTSFH VIKELSSFSK NGGLVGVRNG
0401: GGSRKSDGHM GKFTWRIENF TRLKDILKKR KITGLCIKSR RFQIGNRDCR LIVYPRGQSQ PPCHLSVFLE VTDSRNSNSD WSCFVSHRLS VVNQKMEEKS
0501: VTKESQNRYS KAAKDWGWRE FVTLTSLFDQ DSGFLVQDTV VFSAEVLILK ESSIVQESVV EDIELANAGA HLDEAGKRSS FTWKVENFLS FKEIMETRKI
0601: FSKYFQAGGC ELRIGVYESF DTICIYLESD QSIGSDPEKN FWVKYRMAIL NQKSHSKTVW KESSICTKTW NNSVLQFMKI PEMLESDAGF LVRDTVVFVC
0701: EILDCCPWFD FADLEVLASD DDQDALTTDP DELIDSEDSE GISDEEDIFR NLLSGAGFHL TYGDNPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPAK
0801: VKRLLLPTNI SGCSDGKKVN KNDKSSPSLM NLLMGVKVLQ QAIVDLLLDI MVECCQPSEG SSSSGSSEVN PKTFPNGNGA GSQLGSDRAN GANEPLQLYT
0901: HDRLDTVTDE SMNSSAVQSS DIDGINAHER AFNGKPMHPH PPETSAGGSS ENPSLRTKTK WPEQSEELLG LIVNSLRALD GAVPQGCPEP RRRPQSAEKI
1001: ALVLDKAPKH LQPDLVALVP KLVEHSEHPL AAYALLERLQ KPDAEPALMI PVFGALGQLE CSSDVWERVL FQSFDLLVDS IDEPLAATVD FIFKAALHCH
1101: HLPEAVRAVR IRLKKLGNEV SPCVLDYLSR TVNSCSDVAK AILRDIDCEN KSGDNCSAVP CGIFLFGESC HTSERPREVD EQAFLSNHHF SDIYILIDML
1201: SIQCLALEAS QTFERTVARG AIVAQSVAMV LERRFARRLN LTSQYVENFP HTDVIVEGET IEQLTAQRDD FTSILGLAET LALSRDPRVK GFVKLLYTIL
1301: FKWYADESYR LRILKRLVDR LTISRESACE VDLYMEILII LMCEEQEIVR PVLTMMREVA ELANVDRAAL WHQLCAIEDE IMRIREEREV ENASMAKEKS
1401: IMSQKLNESE ATNNRLKSEM RIEMDRFARE RKELAEQIQE VESQLDWLRS ERDEKIAKLT AEKRAIQDRL HDAEAQLSQL KSRKRDELKR VMKEKNALAE
1501: RLKNAEAARK RFDEELKRYA TEKVTREELR KSLEDEVRRL TQTVGQTEEE KREKEEQVAR CEAFIDGMES KLEACEQYIR QLEASLQEEM SRHAPLYGAG
1601: LEALSMNELE TLSRIHEEGL RQIHVIQQRN GSPAGSPLVS PHNLPPTHAL FPAPPPMAVG LPPSLVPNGV GIHSNGHGHA NGSIGPWFNH S
0101: FEVGGFDCRL LVYPKGDSQA LPGYISVYLQ IMDPRNTTSS KWDCFASYRL AIDNPTDSSK SIHRDSWHRF SSKKKSHGWC DFTPSNSILD PKLGFLFNND
0201: CILITADILI LNESVSFSRD NNELQSNSLS NVVVTASSGD VLSGKFTWKV HNFSLFKEMI KTQKIMSPVF PAGECNLRIS VYQSAVNGVE YLSMCLESKD
0301: TEKTLISDRS CWCLFRMSVL NQKPGLNHMH RDSYGRFAAD NKSGDNTSLG WNDYMKMVDF MGSDSGFLVD DTAVFSTSFH VIKELSSFSK NGGLVGVRNG
0401: GGSRKSDGHM GKFTWRIENF TRLKDILKKR KITGLCIKSR RFQIGNRDCR LIVYPRGQSQ PPCHLSVFLE VTDSRNSNSD WSCFVSHRLS VVNQKMEEKS
0501: VTKESQNRYS KAAKDWGWRE FVTLTSLFDQ DSGFLVQDTV VFSAEVLILK ESSIVQESVV EDIELANAGA HLDEAGKRSS FTWKVENFLS FKEIMETRKI
0601: FSKYFQAGGC ELRIGVYESF DTICIYLESD QSIGSDPEKN FWVKYRMAIL NQKSHSKTVW KESSICTKTW NNSVLQFMKI PEMLESDAGF LVRDTVVFVC
0701: EILDCCPWFD FADLEVLASD DDQDALTTDP DELIDSEDSE GISDEEDIFR NLLSGAGFHL TYGDNPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPAK
0801: VKRLLLPTNI SGCSDGKKVN KNDKSSPSLM NLLMGVKVLQ QAIVDLLLDI MVECCQPSEG SSSSGSSEVN PKTFPNGNGA GSQLGSDRAN GANEPLQLYT
0901: HDRLDTVTDE SMNSSAVQSS DIDGINAHER AFNGKPMHPH PPETSAGGSS ENPSLRTKTK WPEQSEELLG LIVNSLRALD GAVPQGCPEP RRRPQSAEKI
1001: ALVLDKAPKH LQPDLVALVP KLVEHSEHPL AAYALLERLQ KPDAEPALMI PVFGALGQLE CSSDVWERVL FQSFDLLVDS IDEPLAATVD FIFKAALHCH
1101: HLPEAVRAVR IRLKKLGNEV SPCVLDYLSR TVNSCSDVAK AILRDIDCEN KSGDNCSAVP CGIFLFGESC HTSERPREVD EQAFLSNHHF SDIYILIDML
1201: SIQCLALEAS QTFERTVARG AIVAQSVAMV LERRFARRLN LTSQYVENFP HTDVIVEGET IEQLTAQRDD FTSILGLAET LALSRDPRVK GFVKLLYTIL
1301: FKWYADESYR LRILKRLVDR LTISRESACE VDLYMEILII LMCEEQEIVR PVLTMMREVA ELANVDRAAL WHQLCAIEDE IMRIREEREV ENASMAKEKS
1401: IMSQKLNESE ATNNRLKSEM RIEMDRFARE RKELAEQIQE VESQLDWLRS ERDEKIAKLT AEKRAIQDRL HDAEAQLSQL KSRKRDELKR VMKEKNALAE
1501: RLKNAEAARK RFDEELKRYA TEKVTREELR KSLEDEVRRL TQTVGQTEEE KREKEEQVAR CEAFIDGMES KLEACEQYIR QLEASLQEEM SRHAPLYGAG
1601: LEALSMNELE TLSRIHEEGL RQIHVIQQRN GSPAGSPLVS PHNLPPTHAL FPAPPPMAVG LPPSLVPNGV GIHSNGHGHA NGSIGPWFNH S
0001: MMKQSSSEAV SSSSSSAAAD QSHPSVSSSS SEKPLSSSSI SPAEDLQVGS SRDGSGGAQE IVAVDRPGEY SALCRWTVES FTRVKAKALW SKYFDVGGYD
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKSEMKAEA DRFSREKKDL VEQFRDVESQ LEWIRSERQD EIDKLSSEKK TLLDRLHEAE TQLALQKTRK RDELKKVGKE KNALTEKLKV TEAARKRFEE
1501: ELKRYATENV TREELRKSLE DQIRQLTQTV GQTKEEKREK EDQIARCEAY IDGMESKLQA CQQYIHTLES SLREEISRHA PLYGANLESL SMKELDTIAR
1601: IHEEGLRQIH ALQQRKGHTL SHGLPQGHTL YPTTPPQLPP MAIGLPPQLI PNGSGVHSNG HINGSVRPWF SHHT
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKSEMKAEA DRFSREKKDL VEQFRDVESQ LEWIRSERQD EIDKLSSEKK TLLDRLHEAE TQLALQKTRK RDELKKVGKE KNALTEKLKV TEAARKRFEE
1501: ELKRYATENV TREELRKSLE DQIRQLTQTV GQTKEEKREK EDQIARCEAY IDGMESKLQA CQQYIHTLES SLREEISRHA PLYGANLESL SMKELDTIAR
1601: IHEEGLRQIH ALQQRKGHTL SHGLPQGHTL YPTTPPQLPP MAIGLPPQLI PNGSGVHSNG HINGSVRPWF SHHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.