Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
- peroxisome 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 57.88 | 52.17 |
| Solyc06g017970.2.1 | Tomato | nucleus | 55.04 | 49.38 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 42.72 | 49.32 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 26.37 | 47.56 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 14.04 | 47.02 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 50.36 | 46.11 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 50.3 | 45.91 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 50.23 | 45.85 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 50.1 | 45.45 |
| EES07147 | Sorghum | nucleus, plastid | 49.64 | 45.23 |
| Zm00001d051075_P002 | Maize | nucleus | 49.37 | 44.24 |
| Os02t0613400-01 | Rice | extracellular | 8.57 | 44.07 |
| VIT_12s0121g00410.t01 | Wine grape | cytosol | 1.12 | 19.32 |
| VIT_08s0032g00600.t01 | Wine grape | cytosol | 10.94 | 14.87 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 10.74 | 14.62 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 10.68 | 14.52 |
| VIT_05s0020g04980.t01 | Wine grape | nucleus | 7.91 | 10.47 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 6.39 | 8.87 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | ProteinID:CBI28254 | ProteinID:CBI28254.3 | ncoils:Coil | UniProt:D7TC69 |
| EMBL:FN595756 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PD936484 | PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 |
| SMART:SM00061 | SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0001BE33AE | ArrayExpress:VIT_11s0016g05880 | EnsemblPlantsGene:VIT_11s0016g05880 |
| EnsemblPlants:VIT_11s0016g05880.t01 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:5463360..5477250
Molecular Weight (calculated)
171693.0 Da
IEP (calculated)
6.072
GRAVY (calculated)
-0.242
Length
1517 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKWTVPDFS KIRGRSHYSP YFTIGGFDFR FMVYPRGDLV ALPGHCSLYL QVMDPRSAKF DCFVSYTLKF LNHIDDSMSV CRESWLRFSP KKKSHGWSDF
0101: AQSSIVLDTK FGFLVNDTMT ILADIRVLND SLTVSQDNNE TKSQLATISG SGSDVLDGRI TWRLKNFVVF KDIFKTQKLV SPAFQVGECS VRICIYRSWI
0201: NGVEYLSMSL EGREFTPDRN CWCLFRVSVL NQKPGLNQFY KESYGRFGPD TNGGDGCSLG WIDYMKMSQL VESENGFFID GTLVFSTSFH VIKEFSNFSK
0301: NGGVLAGRGT SVARKSDGYT GKFTWKIENF TKLKDLLKRK RIKNLCIKSR KFQIANRDCH LLLYPRGQSQ PPCYLSMFLE VTDSLNTSYD WSCFVHYRVS
0401: VINQKGEERS ITKESQSRYS KSAKEFGWPE FVTLASLFDQ DSGLLVQDTI AFSVDLLILK ETSLLEDCTE SSNACFEIDQ DKKLGSFTWK VENFLSFKEI
0501: MQNRKIFSKF FEVGGCELRI GVYESFDTVS TYLECDPSAV SDPDKNFWVS YRMGVVNQKD HNKSLWKESS LCTKTWSSST LQFMKVADLL EVGAGYLVRE
0601: TVIFVCEILD YCPWFEFSDL EVLAPLCNQD TTSESDKLVN SDECEVLSGD KTDKLKDLLS SAGFHLINGN NPSQPLVIPK ETAPLIAAKL AGFLINLCCD
0701: LNDSVKAKHW LPPVKFSASN EEKQEVTVGD ESSPSAFFMR KVKVLQHATI DLLLDIMVKF CQSSDSRSSE DFYDIGLGPS LNSHKAVSKS ESYVENGGSD
0801: CVHFLIYGRG PKVDEKTCTC SIRFMGIEWP GQSEELLELI VNSLKAKDVT FSQVFSELRQ RTQFTQKVLF ILTKAPKSLQ PDLVTLIPKL IDLSEHPLVA
0901: CALLDQLQKS DAEPALQLPV LAAISKMQFG SEVAECVLVH ASSLLGGLKD EPLAAAIDFL FKAASRCQKI LLAVRVVRAR LQSLGAEVSA CVLEVLSKAV
1001: NSCSEIAETM LRDIDSVPEP DGKCLVEEQL LQFSDIYLLV EMLSMPCLSV EVSQAFERAV VRGIIMDQSM AMVLERRHAQ SLNFDSVSSA QKNLHKDMAL
1101: EEKTGSLPAQ EVDFTLVLCL ARTLALSRDS RVYGFVRTLY AILFKMFAKE DDHRKILKGL VDRAITPAEH CCEVNIDLDI LALLVHEEQG ISKQVLNMMR
1201: EVVELSNVDR ATLRRQLRAK EKENIHTQEI RQAELSNMLR EKAILLDRLS DSEATIDHLK SEVRLGKEHF AQEKMEFTGQ MREVKNRIEQ LRSERDSKIA
1301: KLSMEKKLYQ DRLHDAEAQQ SLLKFQKHDE LKRAIREKNV LAERLKVAEA MINKFDEELK RYASEAVNRE EVQKLLQNEV QWFKQKVEQT ELEKMQKEEH
1401: IASYEAYITS MEAKLNECQT YISSLEVALR DEMLQHAPLY GVGLEDMSVE ELDTLSSIHE EGLRAIHSLQ QQKGIPRGNP LMSLSTTAAL PPPLVSDGVH
1501: HRNGHVNGTD RPPLNYS
0101: AQSSIVLDTK FGFLVNDTMT ILADIRVLND SLTVSQDNNE TKSQLATISG SGSDVLDGRI TWRLKNFVVF KDIFKTQKLV SPAFQVGECS VRICIYRSWI
0201: NGVEYLSMSL EGREFTPDRN CWCLFRVSVL NQKPGLNQFY KESYGRFGPD TNGGDGCSLG WIDYMKMSQL VESENGFFID GTLVFSTSFH VIKEFSNFSK
0301: NGGVLAGRGT SVARKSDGYT GKFTWKIENF TKLKDLLKRK RIKNLCIKSR KFQIANRDCH LLLYPRGQSQ PPCYLSMFLE VTDSLNTSYD WSCFVHYRVS
0401: VINQKGEERS ITKESQSRYS KSAKEFGWPE FVTLASLFDQ DSGLLVQDTI AFSVDLLILK ETSLLEDCTE SSNACFEIDQ DKKLGSFTWK VENFLSFKEI
0501: MQNRKIFSKF FEVGGCELRI GVYESFDTVS TYLECDPSAV SDPDKNFWVS YRMGVVNQKD HNKSLWKESS LCTKTWSSST LQFMKVADLL EVGAGYLVRE
0601: TVIFVCEILD YCPWFEFSDL EVLAPLCNQD TTSESDKLVN SDECEVLSGD KTDKLKDLLS SAGFHLINGN NPSQPLVIPK ETAPLIAAKL AGFLINLCCD
0701: LNDSVKAKHW LPPVKFSASN EEKQEVTVGD ESSPSAFFMR KVKVLQHATI DLLLDIMVKF CQSSDSRSSE DFYDIGLGPS LNSHKAVSKS ESYVENGGSD
0801: CVHFLIYGRG PKVDEKTCTC SIRFMGIEWP GQSEELLELI VNSLKAKDVT FSQVFSELRQ RTQFTQKVLF ILTKAPKSLQ PDLVTLIPKL IDLSEHPLVA
0901: CALLDQLQKS DAEPALQLPV LAAISKMQFG SEVAECVLVH ASSLLGGLKD EPLAAAIDFL FKAASRCQKI LLAVRVVRAR LQSLGAEVSA CVLEVLSKAV
1001: NSCSEIAETM LRDIDSVPEP DGKCLVEEQL LQFSDIYLLV EMLSMPCLSV EVSQAFERAV VRGIIMDQSM AMVLERRHAQ SLNFDSVSSA QKNLHKDMAL
1101: EEKTGSLPAQ EVDFTLVLCL ARTLALSRDS RVYGFVRTLY AILFKMFAKE DDHRKILKGL VDRAITPAEH CCEVNIDLDI LALLVHEEQG ISKQVLNMMR
1201: EVVELSNVDR ATLRRQLRAK EKENIHTQEI RQAELSNMLR EKAILLDRLS DSEATIDHLK SEVRLGKEHF AQEKMEFTGQ MREVKNRIEQ LRSERDSKIA
1301: KLSMEKKLYQ DRLHDAEAQQ SLLKFQKHDE LKRAIREKNV LAERLKVAEA MINKFDEELK RYASEAVNRE EVQKLLQNEV QWFKQKVEQT ELEKMQKEEH
1401: IASYEAYITS MEAKLNECQT YISSLEVALR DEMLQHAPLY GVGLEDMSVE ELDTLSSIHE EGLRAIHSLQ QQKGIPRGNP LMSLSTTAAL PPPLVSDGVH
1501: HRNGHVNGTD RPPLNYS
0001: MMKQSSSEAV SSSSSSAAAD QSHPSVSSSS SEKPLSSSSI SPAEDLQVGS SRDGSGGAQE IVAVDRPGEY SALCRWTVES FTRVKAKALW SKYFDVGGYD
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKSEMKAEA DRFSREKKDL VEQFRDVESQ LEWIRSERQD EIDKLSSEKK TLLDRLHEAE TQLALQKTRK RDELKKVGKE KNALTEKLKV TEAARKRFEE
1501: ELKRYATENV TREELRKSLE DQIRQLTQTV GQTKEEKREK EDQIARCEAY IDGMESKLQA CQQYIHTLES SLREEISRHA PLYGANLESL SMKELDTIAR
1601: IHEEGLRQIH ALQQRKGHTL SHGLPQGHTL YPTTPPQLPP MAIGLPPQLI PNGSGVHSNG HINGSVRPWF SHHT
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKSEMKAEA DRFSREKKDL VEQFRDVESQ LEWIRSERQD EIDKLSSEKK TLLDRLHEAE TQLALQKTRK RDELKKVGKE KNALTEKLKV TEAARKRFEE
1501: ELKRYATENV TREELRKSLE DQIRQLTQTV GQTKEEKREK EDQIARCEAY IDGMESKLQA CQQYIHTLES SLREEISRHA PLYGANLESL SMKELDTIAR
1601: IHEEGLRQIH ALQQRKGHTL SHGLPQGHTL YPTTPPQLPP MAIGLPPQLI PNGSGVHSNG HINGSVRPWF SHHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.