Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35362 | Canola | nucleus, plastid | 96.7 | 96.11 |
| CDY11532 | Canola | nucleus, plastid | 91.14 | 90.31 |
| CDY58924 | Canola | nucleus, plastid | 90.71 | 89.78 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 89.25 | 87.28 |
| AT2G25330.1 | Thale cress | nucleus | 35.31 | 83.41 |
| KRH61745 | Soybean | nucleus | 43.62 | 72.93 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 72.82 | 70.83 |
| KRH52412 | Soybean | nucleus | 71.84 | 70.04 |
| Solyc06g017970.2.1 | Tomato | nucleus | 69.09 | 66.88 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 17.17 | 62.03 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 48.01 | 59.82 |
| KRH61744 | Soybean | cytosol | 23.4 | 59.75 |
| Os02t0613400-01 | Rice | extracellular | 10.26 | 56.95 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 28.53 | 55.53 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 55.89 | 55.22 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 55.89 | 55.05 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 55.77 | 54.93 |
| EES07147 | Sorghum | nucleus, plastid | 55.77 | 54.83 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 55.77 | 54.61 |
| Zm00001d051075_P002 | Maize | nucleus | 55.35 | 53.51 |
| CDY72484 | Canola | cytosol | 2.57 | 25.61 |
| CDY68000 | Canola | nucleus | 1.1 | 16.98 |
| CDX70087 | Canola | cytosol | 11.12 | 16.31 |
| CDY01069 | Canola | cytosol | 11.0 | 16.14 |
| CDX98939 | Canola | cytosol | 11.0 | 16.13 |
| CDY04994 | Canola | cytosol | 10.93 | 16.04 |
| CDY55765 | Canola | cytosol | 10.87 | 15.96 |
| CDY14077 | Canola | cytosol | 10.87 | 15.95 |
| CDX81009 | Canola | cytosol | 10.69 | 15.65 |
| CDX73847 | Canola | cytosol | 10.14 | 15.13 |
| CDY53923 | Canola | cytosol | 10.26 | 15.12 |
| CDY08485 | Canola | cytosol | 7.64 | 15.1 |
| CDY47909 | Canola | cytosol | 1.04 | 14.91 |
| CDY67533 | Canola | cytosol, nucleus | 1.71 | 14.58 |
| CDX73257 | Canola | cytosol | 3.42 | 13.79 |
| CDX93823 | Canola | cytosol | 3.12 | 13.18 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 1.41 | 12.64 |
| CDY00212 | Canola | cytosol | 6.41 | 10.23 |
| CDY32539 | Canola | nucleus | 6.23 | 10.14 |
| CDX86642 | Canola | nucleus | 6.41 | 10.05 |
| CDY10066 | Canola | nucleus | 6.17 | 9.96 |
| CDY22344 | Canola | nucleus | 5.62 | 9.92 |
| CDX86966 | Canola | cytosol | 4.46 | 9.92 |
| CDY18218 | Canola | nucleus | 6.29 | 9.74 |
| CDX94711 | Canola | nucleus | 5.68 | 9.66 |
| CDX89828 | Canola | nucleus | 6.23 | 9.61 |
| CDY08151 | Canola | cytosol | 5.99 | 9.42 |
| CDY05943 | Canola | cytosol | 5.99 | 9.42 |
| CDY01264 | Canola | cytosol | 1.16 | 9.27 |
| CDY01258 | Canola | cytosol | 1.1 | 8.78 |
| CDY26906 | Canola | cytosol | 1.04 | 7.73 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | GO:A0A078CJA6 | InterPro:ARM-type_fold | EnsemblPlants:CDX76975 | ProteinID:CDX76975 |
| ProteinID:CDX76975.1 | ncoils:Coil | InterPro:FANCD2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127527001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | PFAM:PD936484 |
| PFAM:PF00917 | PFAM:PF14631 | PFscan:PS50144 | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 | SMART:SM00061 |
| SUPFAM:SSF48371 | SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0004EE8C46 | SEG:seg | : |
Description
BnaC04g37700D
Coordinates
chrLK031809:-:50048..56251
Molecular Weight (calculated)
184210.0 Da
IEP (calculated)
5.480
GRAVY (calculated)
-0.418
Length
1637 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKQSSSSEAV SSSSSTIDLS HPSVPSPSSK PLCSSSISPA EDLHLGSSRD GSGGAQEIVA VDCRGEYTAV CRWTVENFTR VKAKALWSKY FDVGGYDCRL
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGASSS RWDCFASYRL SIVNHVEESL TIRKDSWHRF SSKKKSHGWC DFTLNGSVLD PKMGFLFNND SLLITADILI
0201: LNESVSSNND SGSLYKENSL AGGPMPDVLS GKFTWRVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETEK TMVSDRSCWC
0301: LFRMSALNQK PGCAHVHRDS YGRFAADNKS GDNTSLGWND YMKMSDFVNP ESGFLVDDTA VFSTSFHVIK EFSSFAKNGG KSDAHMGKFT WRIENFTRLK
0401: DLLKKRKVTG LCIKSKRFQI GNRDCRLIVY PRGQSQPPCH LSVFLEVTDS RSSSDWSCFV SHRLSVVNQR LEEKSVTKES QNRYSKAAKD WGWREFVTLT
0501: SLFDQDSGFL VQDTVVFSAE VLILKETSVT KDYVEAESAS QIDNSVKRSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC ELRIGVYESF DTICIYLESD
0601: QSAGTDVDNN FWVKYRMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE FSDLEVLASD DDQDALTTDP
0701: DDIIDSEESE GISGDEEDTF RDFLSQAGFH LTFGENPSQP QVTLREKLIM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK MSCDDRSKLT KSDESSPSLM
0801: NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSYSEPSSLD AKTDGCVAST SLEATRENGI AEASQHLVDE RFKSDANATT LSTSAVQSSQ VNGIDMLEKA
0901: HAIEPVSPPE TYAEQSSDTS VQSKTKWPEQ SEELLGLIVN SLKTLDSAVP QGCPEPRRRP HSAQKIALVL DRAPKHLQSD LVSLVPKLVE HSEHPLAAYA
1001: LIERLQKPEA EPALREPVYN ALSQLDCDTE VWEHILFQSL ELLNDSDEES LVAAIHFIFK TASQCQHLPG AIRSVRERLK SLGADVSVCV LEYLSKTVHS
1101: WPEIAEMILR DINCDDSLDG NFGTLPFGPF LIGENDSISE MEDLMDKHEF YASRQFFDVY ILLEMLSISS LAVEASQTFE RAVARGAIVV QCVAMVLEKR
1201: RVQGANLSAT SGDPVLEGEV SEQEAAGEIE FRALLSLAET LAHSKDPQVR GFVKRLYAVL FKWFPDQPFR VQILRRLVDR FTSPASSNGE LDLELRILDI
1301: LIFQEREVAR PILAMLKKAV EHANIDRAAL WHQLRVNKEE LVRLKEEKKT EIQTLTKEKS GITKKLSESE AAKTRLKSEM KAETDRFGRE KKELVEQFRD
1401: VESQLEWVRS ERQDEIDKLS SEKKALLDRL TEAETQLSLL KTRKRDELKK TGKEKTALTE KLKVTEAARK RFEEELKRYA TENATREEVR KSLEDEIRRL
1501: TRTVGQTKEE KREKENQIAR CEAYIDGMES KLQACQQYIS TLESSLREEI SRHAPLYGAN LDSLSMKELD TIARIHEEGL RQIHAHQQRK GNGLSHGLSH
1601: GHTLYPSTPP QLLPNGSGVH SNGHVNGSVR PWFSHHT
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGASSS RWDCFASYRL SIVNHVEESL TIRKDSWHRF SSKKKSHGWC DFTLNGSVLD PKMGFLFNND SLLITADILI
0201: LNESVSSNND SGSLYKENSL AGGPMPDVLS GKFTWRVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETEK TMVSDRSCWC
0301: LFRMSALNQK PGCAHVHRDS YGRFAADNKS GDNTSLGWND YMKMSDFVNP ESGFLVDDTA VFSTSFHVIK EFSSFAKNGG KSDAHMGKFT WRIENFTRLK
0401: DLLKKRKVTG LCIKSKRFQI GNRDCRLIVY PRGQSQPPCH LSVFLEVTDS RSSSDWSCFV SHRLSVVNQR LEEKSVTKES QNRYSKAAKD WGWREFVTLT
0501: SLFDQDSGFL VQDTVVFSAE VLILKETSVT KDYVEAESAS QIDNSVKRSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC ELRIGVYESF DTICIYLESD
0601: QSAGTDVDNN FWVKYRMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE FSDLEVLASD DDQDALTTDP
0701: DDIIDSEESE GISGDEEDTF RDFLSQAGFH LTFGENPSQP QVTLREKLIM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK MSCDDRSKLT KSDESSPSLM
0801: NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSYSEPSSLD AKTDGCVAST SLEATRENGI AEASQHLVDE RFKSDANATT LSTSAVQSSQ VNGIDMLEKA
0901: HAIEPVSPPE TYAEQSSDTS VQSKTKWPEQ SEELLGLIVN SLKTLDSAVP QGCPEPRRRP HSAQKIALVL DRAPKHLQSD LVSLVPKLVE HSEHPLAAYA
1001: LIERLQKPEA EPALREPVYN ALSQLDCDTE VWEHILFQSL ELLNDSDEES LVAAIHFIFK TASQCQHLPG AIRSVRERLK SLGADVSVCV LEYLSKTVHS
1101: WPEIAEMILR DINCDDSLDG NFGTLPFGPF LIGENDSISE MEDLMDKHEF YASRQFFDVY ILLEMLSISS LAVEASQTFE RAVARGAIVV QCVAMVLEKR
1201: RVQGANLSAT SGDPVLEGEV SEQEAAGEIE FRALLSLAET LAHSKDPQVR GFVKRLYAVL FKWFPDQPFR VQILRRLVDR FTSPASSNGE LDLELRILDI
1301: LIFQEREVAR PILAMLKKAV EHANIDRAAL WHQLRVNKEE LVRLKEEKKT EIQTLTKEKS GITKKLSESE AAKTRLKSEM KAETDRFGRE KKELVEQFRD
1401: VESQLEWVRS ERQDEIDKLS SEKKALLDRL TEAETQLSLL KTRKRDELKK TGKEKTALTE KLKVTEAARK RFEEELKRYA TENATREEVR KSLEDEIRRL
1501: TRTVGQTKEE KREKENQIAR CEAYIDGMES KLQACQQYIS TLESSLREEI SRHAPLYGAN LDSLSMKELD TIARIHEEGL RQIHAHQQRK GNGLSHGLSH
1601: GHTLYPSTPP QLLPNGSGVH SNGHVNGSVR PWFSHHT
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.