CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0192900-01	Rice	cytosol, nucleus	7.88	65.17
CDY00212	Canola	cytosol	85.6	61.4
CDY05943	Canola	cytosol	77.99	55.19
CDY08151	Canola	cytosol	77.85	55.1
AT3G49600.1	Thale cress	cytosol	76.22	52.58
PGSC0003DMT400047483	Potato	nucleus	38.04	47.62
VIT_04s0008g03170.t01	Wine grape	mitochondrion	52.99	35.65
KRH16103	Soybean	nucleus	52.31	35.65
KRH04994	Soybean	nucleus	51.9	35.34
KRH61900	Soybean	cytosol, mitochondrion, nucleus	51.36	34.49
KRH52561	Soybean	cytosol	51.09	33.66
Solyc03g078390.2.1	Tomato	nucleus	49.18	33.18
OQU79121	Sorghum	nucleus	44.16	32.11
TraesCS4B01G267000.2	Wheat	mitochondrion, nucleus	46.6	31.94
TraesCS4A01G038800.2	Wheat	mitochondrion, nucleus	46.47	31.84
TraesCS4D01G266600.2	Wheat	mitochondrion, nucleus	46.47	31.84
Zm00001d020157_P011	Maize	cytosol, mitochondrion, nucleus	47.01	31.77
GSMUA_Achr11P...	Banana	nucleus	46.74	31.5
Zm00001d028177_P004	Maize	cytosol	45.52	31.22
HORVU4Hr1G071690.9	Barley	nucleus	33.15	26.78
PGSC0003DMT400047482	Potato	nucleus	11.55	15.18
CDY67533	Canola	cytosol, nucleus	2.85	10.94
CDY08485	Canola	cytosol	11.28	10.02
CDY47909	Canola	cytosol	1.49	9.65
CDX72290	Canola	cytosol, mitochondrion, plastid	1.9	7.69
CDY01069	Canola	cytosol	11.55	7.62
CDX73847	Canola	cytosol	11.14	7.47
CDX70087	Canola	cytosol	11.28	7.44
CDX98939	Canola	cytosol	11.14	7.35
CDY04994	Canola	cytosol	11.14	7.35
CDY14077	Canola	cytosol	11.14	7.35
CDY53923	Canola	cytosol	11.01	7.29
CDY55765	Canola	cytosol	11.01	7.26
CDX81009	Canola	cytosol	11.01	7.25
CDX76975	Canola	nucleus, plastid	9.92	4.46
CDY22344	Canola	nucleus	5.57	4.42
CDY11532	Canola	nucleus, plastid	9.92	4.42
CDY58924	Canola	nucleus, plastid	9.92	4.41
CDY35362	Canola	nucleus, plastid	9.78	4.37
CDX94711	Canola	nucleus	5.71	4.36
CDY10066	Canola	nucleus	5.98	4.34
CDX86642	Canola	nucleus	6.11	4.31
CDY32539	Canola	nucleus	5.71	4.17
CDX89828	Canola	nucleus	5.71	3.96
CDY18218	Canola	nucleus	5.43	3.78
CDY26906	Canola	cytosol	0.95	3.18
CDY01264	Canola	cytosol	0.68	2.44
CDX73257	Canola	cytosol	1.09	1.97
CDY01258	Canola	cytosol	0.54	1.95
CDX93823	Canola	cytosol	0.68	1.29
CDY72484	Canola	cytosol	0.14	0.61
Os03t0192800-01	Rice	nucleus	0.0	0.0
CDY68000	Canola	nucleus	0.0	0.0

Protein Annotations

MapMan:19.2.3.1.1.12	Gene3D:3.10.20.90	Gene3D:3.90.70.10	GO:A0A078DCH0	EnsemblPlants:CDX86966	ProteinID:CDX86966
ProteinID:CDX86966.1	InterPro:DUSP-like_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:GSBRNA2T00145789001
InterPro:IPR000626	InterPro:IPR006615	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00973	PFscan:PS50053
PFscan:PS50235	PFscan:PS51283	PANTHER:PTHR45185	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_C19_DUSP	InterPro:Peptidase_C19_UCH
SUPFAM:SSF143791	SUPFAM:SSF54001	SUPFAM:SSF54236	UniParc:UPI0004EE0D97	InterPro:USP_CS	InterPro:USP_dom
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	:	:	:	:

Description

BnaC03g52360D

Coordinates

chrLK031848:+:890094..893812

Molecular Weight (calculated)

81946.0 Da

IEP (calculated)

5.279

GRAVY (calculated)

-0.470

Length

736 amino acids

Sequence
(BLAST)

001: MRSRLAESSE NEFTYELSAV LIHKGSAVNS GHYVAHIKNE KTGLSWIFDD QQVSELGTHP FIEGSSSTPK SESNGASSSG KDTTESEVFS STDAYMLIYS
101: LRSSKIESLE GQRENPIDIT KGDVEQPEGG YLPPHLDEWI SDLNATFLEG CKQFDLRKER ELNTLTERRQ EVRTILSEAA IGFVYGLIPS RRRRALDNTP
201: LLCSHGKVLA SKITCMKRIS ELAWTKLESK FNGGPKLGKG DYCRECLMDG ARMVVSSDSY RDRRTFMKSI AGDVLSGKFE DGEYYVSKAW LQQWVKRKNL
301: DAPSEADAGR PTNAITCSHG GLMPEQAPGA KRILVPENFW SFLVEDALKV TPEDTSGCPC FPLDSSQCSH CTSELSEVAD VEDALRTIKA KQRQNHEKLA
401: TGKGIALAPQ SRYFLVPSPW LVQWRSCINM TGKNSSSVPE PELLNGVIDT LKCEKHKRLL ERLPELVCKR GSFFQKNSSV SAWEDLKSLV LTLVTGSDSL
501: VLWLCGVITG STEKLTIIPE DDWKWIMENG VSAFLETGNS KNGSASQDVI DLEKDMDIDT QQLILRTSPE VCEECIGDRE SCELMQKLSY SEGEVSVCLV
601: RGKEAPKSML EASDSGLEVD RRTSKRSRRT NYGKQTSLKV SATTTVYQLK MMIWQLLGVM KENQELHKGT QVIDQESATL ADMNIFPGDK LWVRDTEIHE
701: HRDIADGICD KKMGHQDIEA GFRGTLLTGD ITSEAG

Best Arabidopsis Sequence Match ( AT3G49600.1 )
(BLAST)

0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC

Arabidopsis Description

UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.