Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001426.1-P | Field mustard | cytosol | 99.27 | 97.93 |
| CDY53923 | Canola | cytosol | 98.09 | 96.85 |
| CDY47909 | Canola | cytosol | 9.21 | 88.6 |
| CDY08485 | Canola | cytosol | 66.82 | 88.53 |
| CDY01069 | Canola | cytosol | 89.52 | 88.07 |
| AT3G11910.1 | Thale cress | cytosol | 89.33 | 87.89 |
| CDY67533 | Canola | cytosol, nucleus | 15.31 | 87.5 |
| CDX70087 | Canola | cytosol | 84.87 | 83.42 |
| CDY14077 | Canola | cytosol | 84.87 | 83.42 |
| CDY04994 | Canola | cytosol | 84.87 | 83.42 |
| CDX98939 | Canola | cytosol | 84.69 | 83.24 |
| CDY55765 | Canola | cytosol | 84.59 | 83.23 |
| CDX81009 | Canola | cytosol | 83.04 | 81.48 |
| VIT_08s0032g00600.t01 | Wine grape | cytosol | 81.22 | 79.84 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 78.67 | 76.92 |
| PGSC0003DMT400072539 | Potato | cytosol | 78.4 | 76.65 |
| CDY72484 | Canola | cytosol | 10.67 | 71.34 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 10.85 | 65.38 |
| CDX73257 | Canola | cytosol | 7.57 | 20.44 |
| CDX93823 | Canola | cytosol | 6.47 | 18.35 |
| CDY68000 | Canola | nucleus | 1.64 | 16.98 |
| CDY05943 | Canola | cytosol | 14.49 | 15.29 |
| CDY08151 | Canola | cytosol | 14.49 | 15.29 |
| CDY00212 | Canola | cytosol | 14.13 | 15.11 |
| CDY10066 | Canola | nucleus | 13.49 | 14.6 |
| CDY26906 | Canola | cytosol | 2.92 | 14.55 |
| CDX86642 | Canola | nucleus | 13.86 | 14.55 |
| CDY32539 | Canola | nucleus | 13.31 | 14.51 |
| CDX89828 | Canola | nucleus | 13.4 | 13.85 |
| CDX94711 | Canola | nucleus | 12.03 | 13.71 |
| CDY18218 | Canola | nucleus | 13.22 | 13.71 |
| CDY01264 | Canola | cytosol | 2.55 | 13.66 |
| CDY22344 | Canola | nucleus | 11.03 | 13.05 |
| CDY01258 | Canola | cytosol | 2.28 | 12.2 |
| CDX86966 | Canola | cytosol | 7.47 | 11.14 |
| CDX76975 | Canola | nucleus, plastid | 15.13 | 10.14 |
| CDY11532 | Canola | nucleus, plastid | 15.22 | 10.11 |
| CDY58924 | Canola | nucleus, plastid | 15.22 | 10.1 |
| CDY35362 | Canola | nucleus, plastid | 15.04 | 10.02 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | GO:A0A078CAF1 |
| EnsemblPlants:CDX73847 | ProteinID:CDX73847 | ProteinID:CDX73847.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSBRNA2T00111552001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom | PFAM:PF00443 |
| PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 |
| PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 |
| SUPFAM:SSF54001 | InterPro:TRAF-like | UniParc:UPI0004EE5C5C | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
BnaA03g32000D
Coordinates
chrLK031800:+:200341..208919
Molecular Weight (calculated)
128062.0 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.608
Length
1097 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMITPPPLD QQEDVEMLVP HSDVVEGPQP MEVAQPEAAA AVENPPVEEP PSVKFTWLIP GFTRLNTRKH YSEVFVAGGY KWRVLIFPKG NNVDHLAMYL
0101: DVADAASLPY GWCRYSHFGL TVVNQINNRY SVRKETQHQF NSRESDWGFT SFMPLGELYD PTRGYLVNDT VLIEAEVSVR KVLDYWAYDS KKETGFVGLK
0201: NQERWDTCLA VYHMPTTEND APTASIPLAL QSLFYKLQYN DTSVATKELT KSFGWDTYDS FMQHDVQELN RVLCEKLEDK MKGTVVEGTI QKLFEGHQMN
0301: YIECINVDYK STRKESFYDL QLDVKGCKDV YASFDKYVEV ERLEGDNKYH AEGHDLQDAK KGVLFMDFPP VLQLQLKRFE YDFMRDIMVK INDRYEFPLQ
0401: LDLDRENGKY LSPDADKSVR NLYTLHSVLV HSGGVNGGHY YAYIRPTLSD QWYKFDDERV TKEDVNRVLE EQYGGEEELP QNNPGFNNPP FKFTKYSNAY
0501: MLVYIRESDK DKIICNVDEK DVAEHLRVRL KKEQDEKEDK RKYKAEAHLF TTVKVARDED ITEQIGKNMY FDLVDHEKVK SFRIEKQTPF LLFKEEVAKE
0601: FGVPVELQRF WIWAKRQNHT YRPNRPLLSH EELQMVGHIR EASNKANNAE LKLFLEIVRG PDERPIPPPA KSFEDILLFF KLYDPENGIL RYVGRLMVKN
0701: SSKPMDIIGE LIQMAGFAPD EEIELFEEIK FQPCVMCEHL DKNMSFKLSQ IEDGDIICYQ KVSIQENECP YPDVPSFLEY VQNREVVRFR TLEKPNDDEF
0801: TMELSKLHSY DDVVDRLAEK IGLDDSSKIR LTPHNCYSQQ PKPQPIKYRG VDHLSDMLAH YNQTSDILYY EVLDIPLPEL QGLKILNVAF HHASKDEVII
0901: HTIRLPKQST VGDVINELKT KVELSHQDAE LRLLEVFSHK IYKIFVSTER IENINDSYWT LLADEIPEEE KNIGPNARLI HVYHFTKESG PNQQVHNFGD
1001: PFVLVIHEGE TLEEIKTRIQ KKLHVPDEDF AKWKFASVST GRPDYLQDTD VVYNRFHQRK DVYGAWEQYL GLEHVDNAPK RAYQNRHAYE KPVKIYN
0101: DVADAASLPY GWCRYSHFGL TVVNQINNRY SVRKETQHQF NSRESDWGFT SFMPLGELYD PTRGYLVNDT VLIEAEVSVR KVLDYWAYDS KKETGFVGLK
0201: NQERWDTCLA VYHMPTTEND APTASIPLAL QSLFYKLQYN DTSVATKELT KSFGWDTYDS FMQHDVQELN RVLCEKLEDK MKGTVVEGTI QKLFEGHQMN
0301: YIECINVDYK STRKESFYDL QLDVKGCKDV YASFDKYVEV ERLEGDNKYH AEGHDLQDAK KGVLFMDFPP VLQLQLKRFE YDFMRDIMVK INDRYEFPLQ
0401: LDLDRENGKY LSPDADKSVR NLYTLHSVLV HSGGVNGGHY YAYIRPTLSD QWYKFDDERV TKEDVNRVLE EQYGGEEELP QNNPGFNNPP FKFTKYSNAY
0501: MLVYIRESDK DKIICNVDEK DVAEHLRVRL KKEQDEKEDK RKYKAEAHLF TTVKVARDED ITEQIGKNMY FDLVDHEKVK SFRIEKQTPF LLFKEEVAKE
0601: FGVPVELQRF WIWAKRQNHT YRPNRPLLSH EELQMVGHIR EASNKANNAE LKLFLEIVRG PDERPIPPPA KSFEDILLFF KLYDPENGIL RYVGRLMVKN
0701: SSKPMDIIGE LIQMAGFAPD EEIELFEEIK FQPCVMCEHL DKNMSFKLSQ IEDGDIICYQ KVSIQENECP YPDVPSFLEY VQNREVVRFR TLEKPNDDEF
0801: TMELSKLHSY DDVVDRLAEK IGLDDSSKIR LTPHNCYSQQ PKPQPIKYRG VDHLSDMLAH YNQTSDILYY EVLDIPLPEL QGLKILNVAF HHASKDEVII
0901: HTIRLPKQST VGDVINELKT KVELSHQDAE LRLLEVFSHK IYKIFVSTER IENINDSYWT LLADEIPEEE KNIGPNARLI HVYHFTKESG PNQQVHNFGD
1001: PFVLVIHEGE TLEEIKTRIQ KKLHVPDEDF AKWKFASVST GRPDYLQDTD VVYNRFHQRK DVYGAWEQYL GLEHVDNAPK RAYQNRHAYE KPVKIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.