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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010174.1-P Field mustard cytosol 100.0 100.0
CDY01264 Canola cytosol 63.64 68.29
CDY01258 Canola cytosol 63.64 68.29
CDX73257 Canola cytosol 94.55 51.23
CDX93823 Canola cytosol 70.0 39.79
AT4G16045.1 Thale cress cytosol 39.09 22.51
OQU79503 Sorghum nucleus 37.27 18.1
Os05t0508700-01 Rice nucleus 43.18 12.32
CDY32539 Canola nucleus 49.55 10.84
CDY18218 Canola nucleus 51.82 10.78
CDY10066 Canola nucleus 49.55 10.75
CDX89828 Canola nucleus 51.36 10.65
CDX86642 Canola nucleus 50.45 10.62
CDY22344 Canola nucleus 40.0 9.49
GSMUA_Achr2P12590_001 Banana nucleus 44.09 9.01
CDX94711 Canola nucleus 39.09 8.93
CDX72290 Canola cytosol, mitochondrion, plastid 6.82 8.24
TraesCS5B01G071600.1 Wheat nucleus 41.36 8.11
TraesCS5A01G060400.1 Wheat nucleus 41.36 8.1
HORVU5Hr1G016190.3 Barley nucleus 41.36 8.1
TraesCS5D01G072000.1 Wheat nucleus 41.36 8.1
EES16279 Sorghum nucleus 39.55 7.75
Os01t0775300-01 Rice cytosol, mitochondrion, nucleus 42.73 7.21
EES01550 Sorghum nucleus 39.55 7.19
TraesCS3D01G310000.1 Wheat nucleus 41.36 7.08
TraesCS3A01G321300.2 Wheat nucleus 41.36 6.92
TraesCS3B01G343300.2 Wheat nucleus 41.36 6.9
TraesCS1B01G339200.1 Wheat nucleus 43.18 6.85
KXG22306 Sorghum nucleus 40.0 6.83
TraesCS1A01G325900.1 Wheat nucleus 42.73 6.77
TraesCS1D01G327700.1 Wheat nucleus 42.27 6.7
HORVU3Hr1G075800.5 Barley cytosol, nucleus, plastid 41.36 6.65
HORVU1Hr1G078170.6 Barley cytosol 43.18 6.61
GSMUA_Achr5P03190_001 Banana nucleus 41.82 6.52
CDY08485 Canola cytosol 13.64 3.62
CDY55765 Canola cytosol 15.0 2.96
CDY04994 Canola cytosol 15.0 2.96
CDX70087 Canola cytosol 15.0 2.96
CDY14077 Canola cytosol 15.0 2.96
CDX81009 Canola cytosol 15.0 2.95
CDX73847 Canola cytosol 14.55 2.92
CDY53923 Canola cytosol 14.55 2.88
CDX98939 Canola cytosol 14.55 2.87
CDY01069 Canola cytosol 14.09 2.78
CDY00212 Canola cytosol 10.91 2.34
CDY05943 Canola cytosol 10.0 2.12
CDY08151 Canola cytosol 10.0 2.12
CDY35362 Canola nucleus, plastid 8.18 1.09
CDY11532 Canola nucleus, plastid 8.18 1.09
CDY58924 Canola nucleus, plastid 8.18 1.09
CDX76975 Canola nucleus, plastid 7.73 1.04
CDX86966 Canola cytosol 3.18 0.95
CDY68000 Canola nucleus 0.45 0.94
Zm00001d034390_P001 Maize nucleus 0.0 0.0
Os12t0597200-01 Rice cytosol, nucleus, plastid 0.0 0.0
CDY72484 Canola cytosol 0.0 0.0
CDY67533 Canola cytosol, nucleus 0.0 0.0
CDY47909 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY26906EnsemblPlantsGene:GSBRNA2T00036613001ncoils:CoilProteinID:CDY26906ProteinID:CDY26906.1SEG:seg
UniParc:UPI000253F7E0UniProt:A0A078GNK9MapMan:35.1:::
Description
BnaA05g18060DBnaA05g18060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNK9]
Coordinates
chrLK032196:-:116330..117163
Molecular Weight (calculated)
25549.0 Da
IEP (calculated)
5.126
GRAVY (calculated)
-0.489
Length
220 amino acids
Sequence
(BLAST)
001: MEDKTRWESL CAFWLGMDQK SRREMSQEKM DVILKLVVKH FYIKKEVTSS LVMDFLFHGL NSLVWSSTTQ EKILHTISRQ MGKLLKDDLD SSILNALEEE
101: PKKERATDVK NLPAPMVSVD KDMFVLVDDA MLLMEKAVLE PLLDESGPQN RMEVGNDGGR EDEKRLTEFA RRTLEVFILD HILCNKVEGA YKEAIALKMQ
201: EELIREEEEN LNKRRVKSTK
Best Arabidopsis Sequence Match ( AT1G04300.5 )
(BLAST)
0001: MDSILGRFRN FQKSLKGSIV AMFLKLAVTN GTWHLFIFLI LISCVTIKSR DVIVEALCCS ICLQCVRYIL IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ
0101: FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP FRCLDCGYRR ELVRVYFQNV EQICRRFVEE
0201: KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD
0301: MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF STKIEVAHQE AIALKRQEEL IREEEEAWLA
0401: ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA QSSAEKPDTL GDVSDISDSV DGSADILQPD
0501: LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL
0601: ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI
0701: STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN
0801: QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA
0901: QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH YMARGPYGTD GMMPRQWQMT NMDLSLPAMR
1001: SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
Arabidopsis Description
TRAF1BTNF receptor-associated factor homolog 1b [Source:UniProtKB/Swiss-Prot;Acc:A8MQL1]
SUBAcon: [mitochondrion,golgi,extracellular,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.