Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73847 | Canola | cytosol | 96.85 | 98.09 |
| AT3G11910.1 | Thale cress | cytosol | 90.37 | 90.04 |
| CDY01069 | Canola | cytosol | 90.19 | 89.87 |
| CDY08485 | Canola | cytosol | 66.16 | 88.77 |
| CDY47909 | Canola | cytosol | 9.0 | 87.72 |
| CDY67533 | Canola | cytosol, nucleus | 15.03 | 86.98 |
| CDX70087 | Canola | cytosol | 85.78 | 85.39 |
| CDY55765 | Canola | cytosol | 85.69 | 85.38 |
| CDY14077 | Canola | cytosol | 85.69 | 85.3 |
| CDY04994 | Canola | cytosol | 85.69 | 85.3 |
| CDX98939 | Canola | cytosol | 85.51 | 85.13 |
| CDX81009 | Canola | cytosol | 84.16 | 83.63 |
| VIT_08s0032g00600.t01 | Wine grape | cytosol | 82.09 | 81.72 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 79.39 | 78.61 |
| PGSC0003DMT400072539 | Potato | cytosol | 79.12 | 78.34 |
| CDY72484 | Canola | cytosol | 10.71 | 72.56 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 10.71 | 65.38 |
| CDX73257 | Canola | cytosol | 7.74 | 21.18 |
| CDX93823 | Canola | cytosol | 6.75 | 19.38 |
| CDY68000 | Canola | nucleus | 1.62 | 16.98 |
| CDY05943 | Canola | cytosol | 15.3 | 16.35 |
| CDY08151 | Canola | cytosol | 15.3 | 16.35 |
| CDY00212 | Canola | cytosol | 14.76 | 15.98 |
| CDY10066 | Canola | nucleus | 13.59 | 14.89 |
| CDY32539 | Canola | nucleus | 13.41 | 14.81 |
| CDX86642 | Canola | nucleus | 13.86 | 14.74 |
| CDY26906 | Canola | cytosol | 2.88 | 14.55 |
| CDX94711 | Canola | nucleus | 12.33 | 14.23 |
| CDX89828 | Canola | nucleus | 13.5 | 14.14 |
| CDY18218 | Canola | nucleus | 13.32 | 13.99 |
| CDY01264 | Canola | cytosol | 2.52 | 13.66 |
| CDY22344 | Canola | nucleus | 11.34 | 13.59 |
| CDY01258 | Canola | cytosol | 2.25 | 12.2 |
| CDX86966 | Canola | cytosol | 7.29 | 11.01 |
| CDX76975 | Canola | nucleus, plastid | 15.12 | 10.26 |
| CDY11532 | Canola | nucleus, plastid | 15.12 | 10.17 |
| CDY58924 | Canola | nucleus, plastid | 15.12 | 10.16 |
| CDY35362 | Canola | nucleus, plastid | 14.85 | 10.02 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | GO:A0A078IY29 |
| UniProt:A0A078IY29 | EnsemblPlants:CDY53923 | ProteinID:CDY53923 | ProteinID:CDY53923.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00011702001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00973 | PFscan:PS50144 |
| PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 |
| SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | UniParc:UPI0004EEC0DA | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C |
| InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : | : |
Description
BnaC03g73540DBnaC03g73540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY29]
Coordinates
chrLK033251:-:48653..57347
Molecular Weight (calculated)
129736.0 Da
IEP (calculated)
5.417
GRAVY (calculated)
-0.596
Length
1111 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMITPPPLD QQEDVEMLVP HSDVVEGPQP MEVAQPEAAA AVENPPVEEP PSVKFTWLIP GFTRLNTRKH YSDVFVAGGY KWRVLIFPKG NNVDHLAMYL
0101: DVADAASLPY GWCRYSHFGL TVVNQINNRY SVRKETQHQF NARESDWGFT SFMPLGELYD PTRGYLVNDT VLIEAEVSVR KVLDYWAYDS KKETGFVGLK
0201: NQGATCYMNS LLETLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HQMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFM DFPPVLQLQL KRFEYDFMRD
0401: IMVKINDRYE FPLQLDLDRE NGKYLSPDAD KSVRNLYTLH SVLVHSGGVN GGHYYAYIRP TLSDQWYKFD DERVTKEDVN RVLEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDVAEHL RVRLKKEQEE KEDKRKYKAE AHLFTTVKVA RDEDITEQIG KNMYFDLVDH EKVKSFRIEK
0601: QTPFLLFKEE VAKEFGVPVE LQRFWIWAKR QNHTYRPNRP LLSHEELQMV GHIREASNKA NNAELKLFLE IVRGPDERPI PPPAKSFEDI LLFFKLYDPE
0701: NGVLRYVGRL MVKNSSKPMD IIGELIQMAG FAPDEEIELF EEIKFQPCVM CEHLDKNTSF KLSQIEDGDI ICYQKALSIQ ENECPYPDVP SFLEYVQNRE
0801: VVRFRTLEKP KDDEFTMELS KLHSYDDVVD RLAEKIGLDD SSKIRLTPHN CYSQQPKPQP IKYRGVDHLS DMLAHYNQTS DILYYEVLDI PLPELQGLKI
0901: LNVAFHHASK DEVIIHTIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFSHKIYKTF VSTERIESIN DHYWTLLAEE IPEEEKNIGP NARLIHVYHF
1001: TKESGQNQQV HNFGDPFVLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF AFFSTGRPDY LQDTDVVYNR FQRKDVYGAW EQYLGLEHVD NAPKRAYHNR
1101: HAYEKPVKIY N
0101: DVADAASLPY GWCRYSHFGL TVVNQINNRY SVRKETQHQF NARESDWGFT SFMPLGELYD PTRGYLVNDT VLIEAEVSVR KVLDYWAYDS KKETGFVGLK
0201: NQGATCYMNS LLETLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HQMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFM DFPPVLQLQL KRFEYDFMRD
0401: IMVKINDRYE FPLQLDLDRE NGKYLSPDAD KSVRNLYTLH SVLVHSGGVN GGHYYAYIRP TLSDQWYKFD DERVTKEDVN RVLEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDVAEHL RVRLKKEQEE KEDKRKYKAE AHLFTTVKVA RDEDITEQIG KNMYFDLVDH EKVKSFRIEK
0601: QTPFLLFKEE VAKEFGVPVE LQRFWIWAKR QNHTYRPNRP LLSHEELQMV GHIREASNKA NNAELKLFLE IVRGPDERPI PPPAKSFEDI LLFFKLYDPE
0701: NGVLRYVGRL MVKNSSKPMD IIGELIQMAG FAPDEEIELF EEIKFQPCVM CEHLDKNTSF KLSQIEDGDI ICYQKALSIQ ENECPYPDVP SFLEYVQNRE
0801: VVRFRTLEKP KDDEFTMELS KLHSYDDVVD RLAEKIGLDD SSKIRLTPHN CYSQQPKPQP IKYRGVDHLS DMLAHYNQTS DILYYEVLDI PLPELQGLKI
0901: LNVAFHHASK DEVIIHTIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFSHKIYKTF VSTERIESIN DHYWTLLAEE IPEEEKNIGP NARLIHVYHF
1001: TKESGQNQQV HNFGDPFVLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF AFFSTGRPDY LQDTDVVYNR FQRKDVYGAW EQYLGLEHVD NAPKRAYHNR
1101: HAYEKPVKIY N
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.