Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67533 | Canola | cytosol, nucleus | 93.86 | 55.73 |
| CDY08485 | Canola | cytosol | 94.74 | 13.04 |
| CDY01069 | Canola | cytosol | 92.98 | 9.51 |
| CDX73847 | Canola | cytosol | 88.6 | 9.21 |
| CDY53923 | Canola | cytosol | 87.72 | 9.0 |
| CDY14077 | Canola | cytosol | 86.84 | 8.87 |
| CDY04994 | Canola | cytosol | 85.96 | 8.78 |
| CDY55765 | Canola | cytosol | 85.09 | 8.7 |
| CDX81009 | Canola | cytosol | 85.09 | 8.68 |
| CDX70087 | Canola | cytosol | 84.21 | 8.6 |
| CDX98939 | Canola | cytosol | 83.33 | 8.51 |
| CDY72484 | Canola | cytosol | 4.39 | 3.05 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 4.39 | 2.75 |
| CDX86966 | Canola | cytosol | 9.65 | 1.49 |
| CDY10066 | Canola | nucleus | 12.28 | 1.38 |
| CDY32539 | Canola | nucleus | 11.4 | 1.29 |
| CDX94711 | Canola | nucleus | 10.53 | 1.25 |
| CDY05943 | Canola | cytosol | 10.53 | 1.15 |
| CDY08151 | Canola | cytosol | 10.53 | 1.15 |
| CDX86642 | Canola | nucleus | 10.53 | 1.15 |
| CDY35362 | Canola | nucleus, plastid | 15.79 | 1.09 |
| CDY22344 | Canola | nucleus | 8.77 | 1.08 |
| CDY00212 | Canola | cytosol | 9.65 | 1.07 |
| CDX76975 | Canola | nucleus, plastid | 14.91 | 1.04 |
| CDY11532 | Canola | nucleus, plastid | 14.04 | 0.97 |
| CDY58924 | Canola | nucleus, plastid | 14.04 | 0.97 |
| CDX89828 | Canola | nucleus | 8.77 | 0.94 |
| CDY18218 | Canola | nucleus | 7.89 | 0.85 |
| CDY01264 | Canola | cytosol | 0.88 | 0.49 |
| CDY68000 | Canola | nucleus | 0.0 | 0.0 |
| CDX73257 | Canola | cytosol | 0.0 | 0.0 |
| CDY26906 | Canola | cytosol | 0.0 | 0.0 |
| CDX93823 | Canola | cytosol | 0.0 | 0.0 |
| CDY01258 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY47909 | EnsemblPlantsGene:GSBRNA2T00088427001 | InterPro:USP_C | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF614 | PFAM:PF14533 |
| ProteinID:CDY47909 | ProteinID:CDY47909.1 | UniParc:UPI0004EE0787 | UniProt:A0A078IEV7 | MapMan:35.1 | : |
Description
BnaAnng09410DBnaAnng09410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEV7]
Coordinates
chrLK032744:+:103434..104353
Molecular Weight (calculated)
13714.2 Da
IEP (calculated)
6.956
GRAVY (calculated)
-0.818
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHCFFLQQV QNFGDPFFLV IHEGETLEEI KTRIQKKLRV PDEDFAKWKF ASFSMGRPDY LQDTDVVYDR FQRKDVYGAW EQYLGLEHVD NTPKRAYAAN
101: QNRHAYEKPM KIYN
101: QNRHAYEKPM KIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.