Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047482 | Potato | nucleus | 49.5 | 96.43 |
| PGSC0003DMT400047483 | Potato | nucleus | 48.58 | 90.14 |
| Os03t0192800-01 | Rice | nucleus | 20.26 | 71.06 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 66.82 | 66.64 |
| Os03t0192900-01 | Rice | cytosol, nucleus | 5.32 | 65.17 |
| GSMUA_Achr11P... | Banana | nucleus | 60.13 | 60.07 |
| KRH16103 | Soybean | nucleus | 59.12 | 59.72 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 59.76 | 59.49 |
| KRH52561 | Soybean | cytosol | 60.59 | 59.18 |
| AT3G49600.1 | Thale cress | cytosol | 57.47 | 58.76 |
| KRH04994 | Soybean | nucleus | 58.2 | 58.74 |
| CDY00212 | Canola | cytosol | 55.09 | 58.58 |
| OQU79121 | Sorghum | nucleus | 54.26 | 58.5 |
| Bra019603.1-P | Field mustard | cytosol | 54.9 | 58.38 |
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 56.74 | 57.63 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 56.65 | 57.54 |
| CDY05943 | Canola | cytosol | 54.81 | 57.5 |
| Bra017972.1-P | Field mustard | cytosol | 54.63 | 57.31 |
| CDY08151 | Canola | cytosol | 54.63 | 57.31 |
| TraesCS4B01G267000.2 | Wheat | mitochondrion, nucleus | 56.37 | 57.26 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 56.92 | 57.02 |
| Zm00001d028177_P004 | Maize | cytosol | 56.0 | 56.94 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 46.38 | 55.54 |
| CDX86966 | Canola | cytosol | 33.18 | 49.18 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 16.5 | 16.04 |
| Solyc11g071700.1.1 | Tomato | cytosol, plastid | 16.22 | 15.93 |
| Solyc05g055090.2.1 | Tomato | cytosol | 15.86 | 15.46 |
| Solyc11g006320.1.1 | Tomato | cytosol | 15.67 | 15.31 |
| Solyc06g073820.1.1 | Tomato | cytosol | 15.31 | 14.71 |
| Solyc05g055100.1.1 | Tomato | endoplasmic reticulum | 5.5 | 8.49 |
| Solyc03g005430.2.1 | Tomato | nucleus | 8.07 | 7.66 |
| Solyc06g053740.2.1 | Tomato | cytosol | 2.84 | 7.45 |
| Solyc09g089560.2.1 | Tomato | nucleus | 7.52 | 7.43 |
| Solyc06g053750.2.1 | Tomato | nucleus | 7.52 | 7.21 |
| Solyc06g017970.2.1 | Tomato | nucleus | 10.45 | 6.74 |
Protein Annotations
| MapMan:19.2.3.1.1.12 | Gene3D:3.90.70.10 | MEROPS:C19.068 | InterPro:DUSP-like_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | GO:GO:0048316 | InterPro:IPR006615 | InterPro:IPR028889 | UniProt:K4BHR8 | PFAM:PF00443 |
| ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PFscan:PS51283 | PANTHER:PTHR45185 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Pept_C19_DUSP | InterPro:Peptidase_C19_UCH | SMART:SM00695 | SUPFAM:SSF143791 | SUPFAM:SSF54001 | SUPFAM:SSF54236 |
| EnsemblPlantsGene:Solyc03g078390.2 | EnsemblPlants:Solyc03g078390.2.1 | UniParc:UPI0002767FAA | InterPro:USP48 | InterPro:USP_CS | InterPro:USP_dom |
| InterPro:Ubiquitin-like_domsf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:50802588..50822306
Molecular Weight (calculated)
122652.0 Da
IEP (calculated)
5.376
GRAVY (calculated)
-0.429
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGHQRPNTRS KGKRNRTDDC ADVAAEIYRN VLSTRQVTKD DVNQLYMIWK PACQGCRVNN KDNPNCFCGL IPPQNGNRKS GLWQKTSEVV NALGSDPSDD
0101: CRASPETPAG LTNLGATCYA NSILQCLYMN KSFREGVFSI EPDVLKQQPV LDQLARLFAK LHLYKMAFVD SAPFIQTLEL DNGVQQDSHE FLTLLFSLLE
0201: QCLSRSSVLK ARTIVQDLFR GGVSHVTRCS KCGNESEASS KIEDFYELEL NVKGLKSLDD SLDDYLSVEE LQGDNQYYCD SCATRVDATR SIKLRSLPAV
0301: LNFQLKRCIF LPNTTTRKKI SSAFCFPEEL NMTRRISEHF QSELIYDLSA ILIHKGSAAN SGHYVAHIKN ENTQQWWEFD DEHVSNLGCQ PFGKGSSHSA
0401: VKPSQTVQLD HSSSDVIIEN GNGPDAGERE ASKTDVTEVK TFSSCDAYML MYVLRRPKNC DKMPIDSSGY IAEKEACTSS EVESHLPPHL YEEVEKLNDS
0501: YVDSCEQYKM KKESEVNCLT ERRLEVRSIL SKAAVQSPEE FYFWISMDWL RQWADNIVPS IIDNSSIQCI HGKVPVSKIG SMKRLSSEAW TMLFSKYGGG
0601: PVLAKDDYCI DCLFREAQSM ALADNYRDRR TLMKELAEAA LAGDCVDEKL YYISKPWLQQ WLRRKNVDSP CEADAGPTAS IRCPHGQLMP QQASGARRVL
0701: IPETLWNFTR EIAMAVKPDD SVGCSTFFSD SEPCTQCSIQ LSEVACFEDT LREFKLKQRH SHEKLAMGKA IPILPGIRYY LLPSSWLSKW KSYSNASGKS
0801: APAELETLND VIGFLICEKH SRLLERPPDL ACKRGSILQK SPATDTLTII TDNDWKLFCE DWGGTEAKGI TAEIDCLGND FLGFSEDMEI FEEHMNLNDE
0901: TIVGPESRKF IIKISPEVCE ECIAERKSCE LKRKLNYSDE DICVCFVRGK EPPKSVLEAS VNSLEPNRRT SKRSRKTAFG NSVKLNVSGS TSVYQLKMMI
1001: WEAFGIIKEN QVLHKGSLVI DGESACLADL NIFPGDVLWV TDSEIHEHRD IADELSSQKM EERKTEEGFR GTLLSSSLSS QFVSEASACP N
0101: CRASPETPAG LTNLGATCYA NSILQCLYMN KSFREGVFSI EPDVLKQQPV LDQLARLFAK LHLYKMAFVD SAPFIQTLEL DNGVQQDSHE FLTLLFSLLE
0201: QCLSRSSVLK ARTIVQDLFR GGVSHVTRCS KCGNESEASS KIEDFYELEL NVKGLKSLDD SLDDYLSVEE LQGDNQYYCD SCATRVDATR SIKLRSLPAV
0301: LNFQLKRCIF LPNTTTRKKI SSAFCFPEEL NMTRRISEHF QSELIYDLSA ILIHKGSAAN SGHYVAHIKN ENTQQWWEFD DEHVSNLGCQ PFGKGSSHSA
0401: VKPSQTVQLD HSSSDVIIEN GNGPDAGERE ASKTDVTEVK TFSSCDAYML MYVLRRPKNC DKMPIDSSGY IAEKEACTSS EVESHLPPHL YEEVEKLNDS
0501: YVDSCEQYKM KKESEVNCLT ERRLEVRSIL SKAAVQSPEE FYFWISMDWL RQWADNIVPS IIDNSSIQCI HGKVPVSKIG SMKRLSSEAW TMLFSKYGGG
0601: PVLAKDDYCI DCLFREAQSM ALADNYRDRR TLMKELAEAA LAGDCVDEKL YYISKPWLQQ WLRRKNVDSP CEADAGPTAS IRCPHGQLMP QQASGARRVL
0701: IPETLWNFTR EIAMAVKPDD SVGCSTFFSD SEPCTQCSIQ LSEVACFEDT LREFKLKQRH SHEKLAMGKA IPILPGIRYY LLPSSWLSKW KSYSNASGKS
0801: APAELETLND VIGFLICEKH SRLLERPPDL ACKRGSILQK SPATDTLTII TDNDWKLFCE DWGGTEAKGI TAEIDCLGND FLGFSEDMEI FEEHMNLNDE
0901: TIVGPESRKF IIKISPEVCE ECIAERKSCE LKRKLNYSDE DICVCFVRGK EPPKSVLEAS VNSLEPNRRT SKRSRKTAFG NSVKLNVSGS TSVYQLKMMI
1001: WEAFGIIKEN QVLHKGSLVI DGESACLADL NIFPGDVLWV TDSEIHEHRD IADELSSQKM EERKTEEGFR GTLLSSSLSS QFVSEASACP N
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.