Factsheet for Bra017972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08151	Canola	cytosol	98.75	98.75
CDY05943	Canola	cytosol	98.17	98.17
Bra019603.1-P	Field mustard	cytosol	83.46	84.6
Bra041162.1-P	Field mustard	cytosol, nucleus, plastid	15.77	82.41
AT3G49600.1	Thale cress	cytosol	83.85	81.72
Os03t0192800-01	Rice	nucleus	20.48	68.49
Os03t0192900-01	Rice	cytosol, nucleus	5.58	65.17
PGSC0003DMT400047482	Potato	nucleus	31.92	59.29
VIT_04s0008g03170.t01	Wine grape	mitochondrion	62.12	59.05
KRH16103	Soybean	nucleus	60.1	57.87
KRH04994	Soybean	nucleus	59.33	57.08
KRH61900	Soybean	cytosol, mitochondrion, nucleus	59.52	56.48
KRH52561	Soybean	cytosol	59.81	55.68
Solyc03g078390.2.1	Tomato	nucleus	57.31	54.63
OQU79121	Sorghum	nucleus	52.4	53.85
GSMUA_Achr11P...	Banana	nucleus	56.06	53.39
Zm00001d020157_P011	Maize	cytosol, mitochondrion, nucleus	55.19	52.71
TraesCS4B01G267000.2	Wheat	mitochondrion, nucleus	54.23	52.51
TraesCS4D01G266600.2	Wheat	mitochondrion, nucleus	54.23	52.51
TraesCS4A01G038800.2	Wheat	mitochondrion, nucleus	54.13	52.42
Zm00001d028177_P004	Maize	cytosol	53.85	52.19
HORVU4Hr1G071690.9	Barley	nucleus	44.81	51.15
PGSC0003DMT400047483	Potato	nucleus	27.69	48.98
Bra001426.1-P	Field mustard	cytosol	16.35	15.29
Bra034802.1-P	Field mustard	cytosol	16.25	15.16
Bra038685.1-P	Field mustard	cytosol	15.96	15.06
Bra009210.1-P	Field mustard	cytosol	15.77	14.91
Bra005900.1-P	Field mustard	cytosol	15.77	14.71
Bra028727.1-P	Field mustard	cytosol	15.87	14.5
Bra010174.1-P	Field mustard	cytosol	2.12	10.0
Bra023279.1-P	Field mustard	cytosol	2.5	7.45
Bra032518.1-P	Field mustard	nucleus	6.92	7.24
Bra033684.1-P	Field mustard	nucleus	6.35	7.12
Bra015302.1-P	Field mustard	nucleus	6.92	6.79
Bra007802.1-P	Field mustard	nucleus, plastid	9.52	5.95
Bra034251.1-P	Field mustard	nucleus	8.85	5.59

Protein Annotations

MapMan:19.2.3.1.1.12	Gene3D:3.10.20.90	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra017972	EnsemblPlants:Bra017972.1	EnsemblPlants:Bra017972.1-P
InterPro:DUSP-like_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR000626	InterPro:IPR006615
InterPro:IPR028889	UniProt:M4DN85	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50053
PFscan:PS50235	PFscan:PS51283	PANTHER:PTHR45185	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_C19_DUSP	InterPro:Peptidase_C19_UCH
SMART:SM00695	SUPFAM:SSF143791	SUPFAM:SSF54001	SUPFAM:SSF54236	UniParc:UPI000253F1AA	InterPro:USP48
InterPro:USP_CS	InterPro:USP_dom	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:

Description

AT3G49600 (E=0.0) UBP26, SUP32, ATUBP26 | UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26); ubiquitin thiolesterase/ ubiquitin-specific protease

Coordinates

chrA06:+:9181487..9186836

Molecular Weight (calculated)

116244.0 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.482

Length

1040 amino acids

Sequence
(BLAST)

0001: MRPNTRNKNK RPRPSDAADS YSQILRKIHE ANDVTDEDVN QLFMISKPLC QGCRVNTRDN PNCFCGLVPP PNGSRKSGLW QKTSEIIQAL GPDLSSELRD
0101: SDSTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVD VLRQYPVLDQ IARLFAQLYA SKKSFVDSDA FVKTLELDNG IQQDIHEFST LLLSLLERCL
0201: RHSGVSKAKT IVQDLFRGSV SHVTTCSKCG RESEASSKVE DFYALELNIK GLKSLDDSLN DYFSLEHLNG DNQYFCGSCD ARVDATRCIK LRTLPPVITF
0301: QLKRCVFLPK TTAKKKITSS LSFPQVLDMR SRLAESSENE LTYELSAVLI HKGSAVNSGH YVAHIKDEKT GLWWKFDDEQ VSELGTHPFD EGSSSTAQSE
0401: SNGAASSGKT KDVKQSGSSS IKSEVFSSSD AYMLMYSLRC GKKESQEGQR ENPIDIANGE VASVQQPEGC YLPSHLDKWI NDLNATFLEA CKQFDLTKES
0501: QLNTLTERRQ EVRTILSEAA VQSLEEQYFW ISTEWLRLWA DTISPPALDN TPLLCSHGKV LASKVTCMKR ISELAWTKLE SKFNGGPKLG KGDYCRECLM
0601: DGARMVVSSD SYRDRRTFMK NIATDVLSGK CEDGNYYVSK AWLQQWVKRK NIDAPSEADA GPTNAITCNA LKVTPEDTSG CQCFPLDSIQ CSHCTSELSE
0701: VAGVEDALRT IKAKQRQNHD KLATGKGIAL TPQSRYFLLP SPWLVQWRSY INMTGKNSSS VPEPELLDGV INTLTCQKHT RLVERLPELV YRRGSLFQKN
0801: PSTDKLAIIP EDDWKYFCEE WGGIVEKGVS ALIEAGSNTN QSASQDVIDL DQDSSPDVNM EIDNQQPIIR TFPEVCEECI GERESCELMQ KLTYSEGDVS
0901: VCLVRGKEAP KSMLNASDSS FEVDRRTSKR SRRTNYGKHT SLTVSATTTV YQLKMMIWQL LGVMKENQEL HKGTQLIDQE SATLADMNIF PGDKLWVRDT
1001: EIHEHRDIAD ELCDTKSGPQ DIEEGFRGTL LTGDITFEAC

Best Arabidopsis Sequence Match ( AT3G49600.1 )
(BLAST)

0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC

Arabidopsis Description

UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.