Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22344 | Canola | nucleus | 98.17 | 98.17 |
| OQU79503 | Sorghum | nucleus | 23.19 | 47.46 |
| Bra023279.1-P | Field mustard | cytosol | 16.4 | 43.55 |
| Bra010174.1-P | Field mustard | cytosol | 9.49 | 40.0 |
| Bra015302.1-P | Field mustard | nucleus | 45.63 | 39.91 |
| Bra032518.1-P | Field mustard | nucleus | 41.53 | 38.73 |
| Os05t0508700-01 | Rice | nucleus | 28.48 | 34.24 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 35.81 | 30.86 |
| EES16279 | Sorghum | nucleus | 37.11 | 30.66 |
| TraesCS5B01G071600.1 | Wheat | nucleus | 35.81 | 29.59 |
| TraesCS5D01G072000.1 | Wheat | nucleus | 35.81 | 29.56 |
| TraesCS5A01G060400.1 | Wheat | nucleus | 35.6 | 29.39 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 35.6 | 29.39 |
| EES01550 | Sorghum | nucleus | 32.9 | 25.21 |
| Os01t0775300-01 | Rice | cytosol, mitochondrion, nucleus | 34.2 | 24.33 |
| TraesCS3D01G310000.1 | Wheat | nucleus | 33.66 | 24.26 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 36.89 | 24.22 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 33.87 | 23.81 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 33.66 | 23.73 |
| KXG22306 | Sorghum | nucleus | 32.9 | 23.68 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 34.41 | 23.32 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 33.76 | 22.58 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 33.55 | 22.41 |
| TraesCS1D01G327700.1 | Wheat | nucleus | 33.23 | 22.19 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 33.01 | 21.28 |
| Os12t0597200-01 | Rice | cytosol, nucleus, plastid | 5.83 | 17.48 |
| Bra038685.1-P | Field mustard | cytosol | 14.13 | 11.89 |
| Bra005900.1-P | Field mustard | cytosol | 14.02 | 11.66 |
| Bra009210.1-P | Field mustard | cytosol | 13.81 | 11.64 |
| Bra028727.1-P | Field mustard | cytosol | 14.24 | 11.6 |
| Bra034802.1-P | Field mustard | cytosol | 13.7 | 11.39 |
| Bra001426.1-P | Field mustard | cytosol | 13.38 | 11.15 |
| Bra017972.1-P | Field mustard | cytosol | 7.12 | 6.35 |
| Bra019603.1-P | Field mustard | cytosol | 7.01 | 6.34 |
| Bra041162.1-P | Field mustard | cytosol, nucleus, plastid | 1.29 | 6.03 |
| Bra034251.1-P | Field mustard | nucleus | 10.25 | 5.77 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 10.25 | 5.71 |
Protein Annotations
| EnsemblPlants:Bra033684.1 | EnsemblPlants:Bra033684.1-P | EnsemblPlantsGene:Bra033684 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil |
| PANTHER:PTHR45001 | PFAM:PF00917 | PFscan:PS50144 | SEG:seg | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI000253F791 | UniProt:M4EXZ5 | MapMan:22.5.1.6 | : | : | : |
Description
AT5G43560 (E=6e-138) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein
Coordinates
chrA06:-:25636804..25640979
Molecular Weight (calculated)
104730.0 Da
IEP (calculated)
7.049
GRAVY (calculated)
-0.792
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MLETSNEDCG SGQSSEEENL NRQRRYLEAL AEWRSSDQVE NGFPSTWPPN WDIDDGSKHS ELYGKHTWKI EKYSEINKPE LRSDVFDAGG YKWYISIYPQ
101: GSDVCNYPAL LLCLANHAEI PPGCSHFVQY TLALVNKDPK KSIYFDSLNR LKKLEHYWDW DKLIELPKLQ EGYIDDLDSL IIKAQVQVIR EKIDRPFRCL
201: SSQYRRELLR VYLPYVENIC WQFMEVERIK LFNLMQDNEK WESFSSFWLR LDQNTRRKMS REKMDVVLNI AAKFFFVLRQ GTSTLMMDSL YSGWKTIEDE
301: TKKKKNRQRQ MDNVELPAGP APIVSVDQDM FVLVDDLLVL MKRTVMAPLS IKEENGSQNP SKVWDFGEEY SEEAIVRDES RLTEVGRRTM EMLVLTHIYG
401: KVEVAYKEHT AWEMQEELIR EEEEEWLAES KHKAKRGTTE KERKSKKKQA KKKKNNKKEK RKEEKARSQT EERDTEEEES VRVKTESPAE KPDTLGESMP
501: VPCELDAPEI HNPPSENTSG GRGRSSSISI PSGGSSISIP SGVAERKYTS VYSDESVRSY KGNVSNRQNK IWRIKGKTQP RNVSGANSSA TETENQPSRH
601: ASNPKSQSHS SETRRVGEAA VVISPIQEAQ NPREHHPVTK DGGTVLTQEK SPAVFSPPKA SPWNLPSARS PLSDQQASQS RDIEFQTVGS RAALQNTTSP
701: IPPSMSTRPL RAPTFLRKPA APRTSATSFA RSMSSTGPVS APTHTQTYIP QSYKNAVVGS DHSSSQSTGT SALLSISNHS GFPINVASAE VPWTGGSSSS
801: RDTSATNISG NHRMNPVSTS MRQNDAQIRR PAQSLMTDEF PHLGIINDLL EEEPVLMDAT SGYRLPQWLS DVYSYLADVG ISGRYRSYSE HMSGSSSSSS
901: SFSLYGNGQS ANMATRSQND AFYLPYL
101: GSDVCNYPAL LLCLANHAEI PPGCSHFVQY TLALVNKDPK KSIYFDSLNR LKKLEHYWDW DKLIELPKLQ EGYIDDLDSL IIKAQVQVIR EKIDRPFRCL
201: SSQYRRELLR VYLPYVENIC WQFMEVERIK LFNLMQDNEK WESFSSFWLR LDQNTRRKMS REKMDVVLNI AAKFFFVLRQ GTSTLMMDSL YSGWKTIEDE
301: TKKKKNRQRQ MDNVELPAGP APIVSVDQDM FVLVDDLLVL MKRTVMAPLS IKEENGSQNP SKVWDFGEEY SEEAIVRDES RLTEVGRRTM EMLVLTHIYG
401: KVEVAYKEHT AWEMQEELIR EEEEEWLAES KHKAKRGTTE KERKSKKKQA KKKKNNKKEK RKEEKARSQT EERDTEEEES VRVKTESPAE KPDTLGESMP
501: VPCELDAPEI HNPPSENTSG GRGRSSSISI PSGGSSISIP SGVAERKYTS VYSDESVRSY KGNVSNRQNK IWRIKGKTQP RNVSGANSSA TETENQPSRH
601: ASNPKSQSHS SETRRVGEAA VVISPIQEAQ NPREHHPVTK DGGTVLTQEK SPAVFSPPKA SPWNLPSARS PLSDQQASQS RDIEFQTVGS RAALQNTTSP
701: IPPSMSTRPL RAPTFLRKPA APRTSATSFA RSMSSTGPVS APTHTQTYIP QSYKNAVVGS DHSSSQSTGT SALLSISNHS GFPINVASAE VPWTGGSSSS
801: RDTSATNISG NHRMNPVSTS MRQNDAQIRR PAQSLMTDEF PHLGIINDLL EEEPVLMDAT SGYRLPQWLS DVYSYLADVG ISGRYRSYSE HMSGSSSSSS
901: SFSLYGNGQS ANMATRSQND AFYLPYL
0001: MSESTNEDSG AGRSSLEENS NGQRSQSEEA IAEWRSSEQV ENGTPSTSPP YWDIDDDDDF GSKPSQLFGK NTWTIEKFSD INKRELRGDV FEVGGYKWYI
0101: LIYPQGCDVC NHLSLFLCVA HHEKLLPGWS HFAQFTIAVS NKDPKKSKHS DTLHRFWKKE HDWGWKKFIE LPKLKEGFID DSGCLTIKAQ VQVIRERVDR
0201: PFRCLHYKYR EELVRVYLGN VEQICWRFVE EKRSKLGRLI EDKAKWKSFC AFWMGLDQNS RRRMSREKMD VILKIVVKHF FVEKEVTSTL VMDSLYSGLK
0301: ALEGQNKNKE SRPRLMDTEE STAPIVSVDK DSFALVDDVL LLLEKAALEP LPKKEEKSSQ NRTKDGNAGE EFSREAVERD DRRLTELGRR TVEIFVLAHI
0401: FSNKIEVAYQ EAIAWKRQEE LIREEEEAWL AESEQKGKRG ASEKEKKSKK KQAKQKKNKN KGKEMRKEDK VRTQTEEREI EKEECVRAIA ESSAEKPDTL
0501: GDVSDVSDSV DSSAEILQLD SEDRESSPVH WEMDASEVHP PSAGDTSRGR GNSFSIPNGV AERKGLSTMD DSSSTCSNDS IQSGVANGSY KGNVLNCQSQ
0601: KWFSNGKIQP GKVSDSNSLA SEKEHQPSRL ASDPKNQSHS SDIRRVGEAD IVISHIQKPE SPKERSPVSK DPNMIQMKEK SAAVLSPSRA APWNPPSPVQ
0701: AKPEKKGVSN VEAVPNRKVI SVKSPSSHHA SPSREAQLQT VGPRADIQKI ASPKPVEQPA PPMSRPLSAP IIPPTQAAPV ISAVQTSTAS LARSMSSTGR
0801: LGSPTHSQAY NPQSYKHAIV GSSGFTHPSS QSSGTSTLPP YSHPSPISVS NQSGFPINVG SWDVSSGGLL WTGGSSSTRD TTTTISGNHK TNTYNAPVVT
0901: TSIRPTNVQI GRTAQSLMTD EFPHLDIIND LLADEHGTMD NSVYRVPQQF NNQYSYHGGA DLGISSRSRS YSDDGFHQSY GEYMPHSASS SPYGNGQTQS
1001: QWQMANMDFS LPAMRNQDDV SASATATYSY FDLDSSNPNL SGINGYRDFR PSNGH
0101: LIYPQGCDVC NHLSLFLCVA HHEKLLPGWS HFAQFTIAVS NKDPKKSKHS DTLHRFWKKE HDWGWKKFIE LPKLKEGFID DSGCLTIKAQ VQVIRERVDR
0201: PFRCLHYKYR EELVRVYLGN VEQICWRFVE EKRSKLGRLI EDKAKWKSFC AFWMGLDQNS RRRMSREKMD VILKIVVKHF FVEKEVTSTL VMDSLYSGLK
0301: ALEGQNKNKE SRPRLMDTEE STAPIVSVDK DSFALVDDVL LLLEKAALEP LPKKEEKSSQ NRTKDGNAGE EFSREAVERD DRRLTELGRR TVEIFVLAHI
0401: FSNKIEVAYQ EAIAWKRQEE LIREEEEAWL AESEQKGKRG ASEKEKKSKK KQAKQKKNKN KGKEMRKEDK VRTQTEEREI EKEECVRAIA ESSAEKPDTL
0501: GDVSDVSDSV DSSAEILQLD SEDRESSPVH WEMDASEVHP PSAGDTSRGR GNSFSIPNGV AERKGLSTMD DSSSTCSNDS IQSGVANGSY KGNVLNCQSQ
0601: KWFSNGKIQP GKVSDSNSLA SEKEHQPSRL ASDPKNQSHS SDIRRVGEAD IVISHIQKPE SPKERSPVSK DPNMIQMKEK SAAVLSPSRA APWNPPSPVQ
0701: AKPEKKGVSN VEAVPNRKVI SVKSPSSHHA SPSREAQLQT VGPRADIQKI ASPKPVEQPA PPMSRPLSAP IIPPTQAAPV ISAVQTSTAS LARSMSSTGR
0801: LGSPTHSQAY NPQSYKHAIV GSSGFTHPSS QSSGTSTLPP YSHPSPISVS NQSGFPINVG SWDVSSGGLL WTGGSSSTRD TTTTISGNHK TNTYNAPVVT
0901: TSIRPTNVQI GRTAQSLMTD EFPHLDIIND LLADEHGTMD NSVYRVPQQF NNQYSYHGGA DLGISSRSRS YSDDGFHQSY GEYMPHSASS SPYGNGQTQS
1001: QWQMANMDFS LPAMRNQDDV SASATATYSY FDLDSSNPNL SGINGYRDFR PSNGH
Arabidopsis Description
TRAF1AMATH domain-containing protein At5g43560 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.