Factsheet for Bra041162.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019603.1-P	Field mustard	cytosol	100.0	19.4
Bra017972.1-P	Field mustard	cytosol	82.41	15.77
Bra009210.1-P	Field mustard	cytosol	21.61	3.91
Bra028727.1-P	Field mustard	cytosol	21.61	3.78
Bra005900.1-P	Field mustard	cytosol	21.11	3.77
Bra034802.1-P	Field mustard	cytosol	21.11	3.77
Bra038685.1-P	Field mustard	cytosol	20.6	3.72
Bra001426.1-P	Field mustard	cytosol	20.6	3.69
Bra023279.1-P	Field mustard	cytosol	5.03	2.87
OQU79503	Sorghum	nucleus	6.03	2.65
Os05t0508700-01	Rice	nucleus	7.04	1.82
Bra033684.1-P	Field mustard	nucleus	6.03	1.29
TraesCS5A01G060400.1	Wheat	nucleus	7.04	1.25
EES01550	Sorghum	nucleus	7.54	1.24
Bra007802.1-P	Field mustard	nucleus, plastid	10.05	1.2
TraesCS3D01G310000.1	Wheat	nucleus	7.54	1.17
EES16279	Sorghum	nucleus	6.53	1.16
TraesCS5B01G071600.1	Wheat	nucleus	6.53	1.16
TraesCS5D01G072000.1	Wheat	nucleus	6.53	1.16
HORVU5Hr1G016190.3	Barley	nucleus	6.53	1.16
Os01t0775300-01	Rice	cytosol, mitochondrion, nucleus	7.54	1.15
TraesCS3A01G321300.2	Wheat	nucleus	7.54	1.14
TraesCS3B01G343300.2	Wheat	nucleus	7.54	1.14
HORVU3Hr1G075800.5	Barley	cytosol, nucleus, plastid	7.54	1.1
TraesCS1B01G339200.1	Wheat	nucleus	7.54	1.08
TraesCS1A01G325900.1	Wheat	nucleus	7.54	1.08
TraesCS1D01G327700.1	Wheat	nucleus	7.54	1.08
HORVU1Hr1G078170.6	Barley	cytosol	7.54	1.04
Bra015302.1-P	Field mustard	nucleus	5.53	1.04
Bra034251.1-P	Field mustard	nucleus	8.54	1.03
KXG22306	Sorghum	nucleus	6.53	1.01
GSMUA_Achr2P12590_001	Banana	nucleus	5.03	0.93
Bra032518.1-P	Field mustard	nucleus	4.52	0.91
GSMUA_Achr5P03190_001	Banana	nucleus	4.52	0.64
Os12t0597200-01	Rice	cytosol, nucleus, plastid	0.0	0.0
Bra010174.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d034390_P001	Maize	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	EnsemblPlantsGene:Bra041162	EnsemblPlants:Bra041162.1	EnsemblPlants:Bra041162.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889
UniProt:M4FJ81	PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235	PANTHER:PTHR45185	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000253EDAF	InterPro:USP_CS	InterPro:USP_dom	SEG:seg

Description

AT3G49600 (E=9e-074) UBP26, SUP32, ATUBP26 | UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26); ubiquitin thiolesterase/ ubiquitin-specific protease

Coordinates

chrScaffold002505:+:31..630

Molecular Weight (calculated)

22229.5 Da

IEP (calculated)

6.926

GRAVY (calculated)

-0.202

Length

199 amino acids

Sequence
(BLAST)

001: MYEANDVTEE EVNHLFMIHK KPLCQGCRVN TRDNPNCFCA LVPPPNGTRK SGLWQKTSEL IQALGPDLSS HRRASLSSPS GLTNLGATCY ANSILQCLYM
101: NSAFRDGVFS LEAEVLQQHP VLDQIARLFA QLRASNRSFV DSDAFVKTLE LDNEIQQDTH EFLTLLLSLL ERCLSHSAVS KAQTIVQHLF RGRVSHVTS

Best Arabidopsis Sequence Match ( AT3G49600.1 )
(BLAST)

0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC

Arabidopsis Description

UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.