Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G266600.2 | Wheat | mitochondrion, nucleus | 98.23 | 98.23 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 98.04 | 98.04 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 81.1 | 95.61 |
| Os03t0192900-01 | Rice | cytosol, nucleus | 7.82 | 94.38 |
| Os03t0192800-01 | Rice | nucleus | 24.58 | 84.89 |
| OQU79121 | Sorghum | nucleus | 73.28 | 77.77 |
| Zm00001d020157_P011 | Maize | cytosol, mitochondrion, nucleus | 78.68 | 77.59 |
| Zm00001d028177_P004 | Maize | cytosol | 77.28 | 77.35 |
| GSMUA_Achr11P... | Banana | nucleus | 66.57 | 65.48 |
| VIT_04s0008g03170.t01 | Wine grape | mitochondrion | 60.43 | 59.32 |
| PGSC0003DMT400047482 | Potato | nucleus | 30.63 | 58.75 |
| KRH61900 | Soybean | cytosol, mitochondrion, nucleus | 57.54 | 56.39 |
| Solyc03g078390.2.1 | Tomato | nucleus | 57.26 | 56.37 |
| KRH16103 | Soybean | nucleus | 56.42 | 56.11 |
| KRH04994 | Soybean | nucleus | 55.87 | 55.5 |
| AT3G49600.1 | Thale cress | cytosol | 54.93 | 55.3 |
| KRH52561 | Soybean | cytosol | 57.36 | 55.15 |
| CDY00212 | Canola | cytosol | 52.33 | 54.78 |
| Bra019603.1-P | Field mustard | cytosol | 52.33 | 54.78 |
| CDY08151 | Canola | cytosol | 52.7 | 54.42 |
| CDY05943 | Canola | cytosol | 52.61 | 54.33 |
| Bra017972.1-P | Field mustard | cytosol | 52.51 | 54.23 |
| PGSC0003DMT400047483 | Potato | nucleus | 28.77 | 52.55 |
| CDX86966 | Canola | cytosol | 31.94 | 46.6 |
| TraesCS3B01G341000.1 | Wheat | cytosol | 15.92 | 15.49 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 16.2 | 15.44 |
| TraesCS2B01G263500.4 | Wheat | nucleus | 15.92 | 15.28 |
| TraesCS5B01G071600.1 | Wheat | nucleus | 8.01 | 7.66 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 10.61 | 6.86 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 8.1 | 6.6 |
| PGSC0003DMT400044267 | Potato | nucleus | 2.79 | 6.28 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 7.73 | 5.99 |
Protein Annotations
| MapMan:19.2.3.1.1.12 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | InterPro:DUSP-like_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0048316 | InterPro:IPR000626 | InterPro:IPR006615 |
| InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF06337 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50053 |
| PFscan:PS50235 | PFscan:PS51283 | PANTHER:PTHR45185 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_C19_DUSP | InterPro:Peptidase_C19_UCH |
| SMART:SM00695 | SUPFAM:SSF143791 | SUPFAM:SSF54001 | SUPFAM:SSF54236 | EnsemblPlantsGene:TraesCS4B01G267000 | EnsemblPlants:TraesCS4B01G267000.2 |
| InterPro:USP48 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | TIGR:cd01769 |
| TIGR:cd02668 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:539505232..539515081
Molecular Weight (calculated)
118763.0 Da
IEP (calculated)
6.012
GRAVY (calculated)
-0.504
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNRHNTRNKN KRPHADESAS PSYAALKRIH STGAITQDDI RQLYSVWKPV CQGCHGNTKD SPNCFCGLIP TTGGARKTGL WQKNGEHVSG LGPDPSKDLR
0101: ASTETPAGLT NLGATCYANS ILQCLYMNTS FRSGIFSLEP DILKKQPVLD QLARLFAQLH SSKMAFIDSA PFIKTLELDN GVQQDSHEFL TLFLSLLERS
0201: LSYSKVAVAK TIVQDLFRGS VSHVTRCSSC GRDSEASSKM EDFYELELNI KGLSNLEESL DDYLSVEALN GENQYSCESC QKRVDATRCI KLRSLPPVVN
0301: FQLKRYVFLP KTTTKKKISS SFSFPGQLDM GKRLSDPSSN YIYDLAAILI HKGSAANSGH YVAHIKDESN GHWWEFDDEC VSSLGFHPFG EKPGKSSDKA
0401: DQKSEGTSTE GSVANGNNSS HHDAAPTSNM GEMFSSTDAY MLMYKRSSKD ENGIKSNNIV EASNSSLPRH LMDEIDALNA SCVKECGEYL SKKDNLLASI
0501: QERRQEIKSV ITEAPATPDD DSYFWISLDW LRQWADNATP PSSIDNSPIQ CEHGKVPASK VTSMKRLSAK AWEKLLSKYG GGPTLSKDDV CKECLKDVAK
0601: TAVSADVYRD RKASLKNLAE AALAGSIPEG PSYFISKAWL SHWLRRKNVD ITFDADKGPT SALRCSHGNL LPEHASGAKR VSVPESLWLF LYETIAREAD
0701: DIVTFPSDTQ PCEICDDKLS AVASVEDNLR AVKLKQRQSH EKLISGKGFA LNPGQKYYLV PSSWLSEWRA YITATGKNVS SLPEPQSLEA AINSLKCEKH
0801: SRLLQRPLDI VYKRGGITQK TSNTDGLAII SESDWQSFSE EWNVAHADGA CAEIVFSKSS EDKPHESSQA MVILDKDPDQ SINGANDDLE DCRPYVRTDP
0901: EVCEECIGER ESCALVEKLN YQNEDIHVYL VRGKEAPKSI REASAALPVP DRRTSKRSRR TTTGNSISLK VSGSTTVYQL KLMIWESLGI VKENQKLHKG
1001: PLEIEDDFAT LADKCIFPGD VLWVKDSELF EDRDIADEIS EPKADALPAE EGFRGTLLTS SVSAQLCQDI VLSE
0101: ASTETPAGLT NLGATCYANS ILQCLYMNTS FRSGIFSLEP DILKKQPVLD QLARLFAQLH SSKMAFIDSA PFIKTLELDN GVQQDSHEFL TLFLSLLERS
0201: LSYSKVAVAK TIVQDLFRGS VSHVTRCSSC GRDSEASSKM EDFYELELNI KGLSNLEESL DDYLSVEALN GENQYSCESC QKRVDATRCI KLRSLPPVVN
0301: FQLKRYVFLP KTTTKKKISS SFSFPGQLDM GKRLSDPSSN YIYDLAAILI HKGSAANSGH YVAHIKDESN GHWWEFDDEC VSSLGFHPFG EKPGKSSDKA
0401: DQKSEGTSTE GSVANGNNSS HHDAAPTSNM GEMFSSTDAY MLMYKRSSKD ENGIKSNNIV EASNSSLPRH LMDEIDALNA SCVKECGEYL SKKDNLLASI
0501: QERRQEIKSV ITEAPATPDD DSYFWISLDW LRQWADNATP PSSIDNSPIQ CEHGKVPASK VTSMKRLSAK AWEKLLSKYG GGPTLSKDDV CKECLKDVAK
0601: TAVSADVYRD RKASLKNLAE AALAGSIPEG PSYFISKAWL SHWLRRKNVD ITFDADKGPT SALRCSHGNL LPEHASGAKR VSVPESLWLF LYETIAREAD
0701: DIVTFPSDTQ PCEICDDKLS AVASVEDNLR AVKLKQRQSH EKLISGKGFA LNPGQKYYLV PSSWLSEWRA YITATGKNVS SLPEPQSLEA AINSLKCEKH
0801: SRLLQRPLDI VYKRGGITQK TSNTDGLAII SESDWQSFSE EWNVAHADGA CAEIVFSKSS EDKPHESSQA MVILDKDPDQ SINGANDDLE DCRPYVRTDP
0901: EVCEECIGER ESCALVEKLN YQNEDIHVYL VRGKEAPKSI REASAALPVP DRRTSKRSRR TTTGNSISLK VSGSTTVYQL KLMIWESLGI VKENQKLHKG
1001: PLEIEDDFAT LADKCIFPGD VLWVKDSELF EDRDIADEIS EPKADALPAE EGFRGTLLTS SVSAQLCQDI VLSE
0001: MSRPNTRNKN KRQRPDAVDS SSQILRKIHE ANDVTDDDIN QLFMIWKPVC QGCRVNTRDN PNCFCGLVPP LNGSRKSGLW QKTSEIIQSL GPDPTLDRRD
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
0101: SESTPAGLTN LGATCYANSI LQCLYMNTAF REGVFSVEVH VLKQNPVLDQ IARLFAQLHA SQKSFVDSDA FVKTLELDNG VQQDTHEFLT LLLSLLERCL
0201: LHSGVKAKTI VQDLFSGSVS HVTTCSKCGR DSEASSKMED FYALELNVKG LKSLDASLND YLSLEQLNGD NQYFCGSCNA RVDATRCIKL RTLPPVITFQ
0301: LKRCIFLPKT TAKKKITSSF SFPQVLDMGS RLAESSQNKL TYDLSAVLIH KGSAVNSGHY VAHIKDEKTG LWWEFDDEHV SELGKRPCNE ASSSTPQSES
0401: NGTASSGNIT DGIQSGSSDC RSAIKSEVFS SSDAYMLMYS LRCDKQENQE GQKENPIDIT KGEVKQLKGG YLPKHLSEWI NNMNAVFLES CKQYNLRKEK
0501: ELNALTERRQ EVRTILSEAA VQSLEEQYFW ISTDWLRLWA DTTLPPALDN TPLLCSHGKV HASKVNCMKR ISELAWIKLE SKFNGGPKLG KGDYCRDCLM
0601: DGARMVVSSD SYRDRRTFMK SIANDVLSGK CEDGMYYISR AWLQQWIKRK NLDAPTEADA GPTNAITCNH GELMPEQAPG AKRVVVPENF WSFLFEDALK
0701: VMSEDTLDCT CFPVDSSQCC HCTEVLSEVA CFEDSLRTLK VKQRQNHEKL ATGKGIPLTP QSRYFLLPSP WLVQWRIYIN MTGKNSSSAP EPERLDGVIN
0801: TLKCKKHTRL LERLPELVCR RGSYFQKNPS TDKLTIIPEL DWKYFCDEWG GLMENGISAF IEVGNTDQSS SPDVIDLEKD SSPDDNMDVD AQQLILRASP
0901: EICEECIGER ESCELMQKLS YSEGDVFVCF VRGKEAPKAM LEASDSSFEV DRRTSKRSRR TNYGNLTSLK VSATTTVYQL KMMIWELLGV MKENQELHKG
1001: SKVIDQESAT LADMNIFPGD RLWVRDTEMH EHRDIADELC EKKPGAQDIE EGFRGTLLTG NISSEAC
Arabidopsis Description
UBP26Ubiquitin carboxyl-terminal hydrolase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.