Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g071700.1.1 | Tomato | cytosol, plastid | 70.13 | 71.65 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 65.46 | 66.22 |
| Solyc05g055090.2.1 | Tomato | cytosol | 65.11 | 66.04 |
| Solyc11g006320.1.1 | Tomato | cytosol | 64.76 | 65.8 |
| Os07t0163800-01 | Rice | cytosol, plasma membrane | 16.92 | 65.31 |
| Solyc05g055100.1.1 | Tomato | endoplasmic reticulum | 17.09 | 27.44 |
| TraesCS3A01G176700.1 | Wheat | cytosol | 4.67 | 27.18 |
| Solyc06g053740.2.1 | Tomato | cytosol | 7.31 | 19.95 |
| Solyc03g078390.2.1 | Tomato | nucleus | 14.71 | 15.31 |
| Solyc09g089560.2.1 | Tomato | nucleus | 13.83 | 14.22 |
| Solyc06g053750.2.1 | Tomato | nucleus | 13.3 | 13.27 |
| Solyc03g005430.2.1 | Tomato | nucleus | 13.22 | 13.05 |
| Solyc06g017970.2.1 | Tomato | nucleus | 14.36 | 9.64 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | UniProt:K4C9A0 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF614 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc06g073820.1 | EnsemblPlants:Solyc06g073820.1.1 | InterPro:TRAF-like |
| UniParc:UPI0002766188 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | SEG:seg |
Description
No Description!
Coordinates
chr6:+:45567592..45586036
Molecular Weight (calculated)
131818.0 Da
IEP (calculated)
6.309
GRAVY (calculated)
-0.519
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASTSKNPGD TEMTPLLPPR GKGYQGSDAP VVTGNDGDNQ LSEDPQTFYW KVVNFSRLNV RKLYSDDFIA GGYKWRILLF PKGKNSEYLS MYLGAADSTA
0101: LPSGWVIHAH FSLSVVNQTQ NDYSIRKETQ HRFCSTASEW GFKPFMSLVE LYDPDKGYLV GDMCTIEAEV AVLSDSEFML YDSIHSKKAT NFVGLKNQGA
0201: TCYLNSLLQT FYHIPYFRKA VYNMPTTEND MPLALQNLFY KLQFSGKSVA TRELTKSFGW DSSDVFMQHD VHELNTVLCE KLEGKMKGTI VEGTIQQLFE
0301: GHNMSYIECI NVDYKSTCTD TFNDIQLLVK GCSDVYASFD KYVEVDYLDG DNKYSSELYG LQDAKKGVLF IDFPPVLQLH LKRFEYDSMR GNDSKINDPY
0401: EFPLQLDLDR ENGKYLSPEA DRTVRNLYTL HSVLAHGGSV TGGHYYAFIR PTLSNQWYKF NDERVTKVDA KRALEDQYGG QGKLPQTNPG YEFQISENSN
0501: AYLLVYIRES DKEKIMCTVE QKDIGEHLRV RYSTSSMSCL FIFAPISHVD LTILMDVFKA RFEIDQEDEE QKKKDESEAN LYTVIKVARD EDIRQQIGKD
0601: IYFDLVDHEK VKCFRIQRET LFSAFKEDIK KEFCVPVQFQ RYWLWAKRQN HTYRPDRPLT RLEESQTVGQ LRKVSSKFHN AELKLFLEVE LGPELMLLSP
0701: PEKANDDILL FFKGYDPEKE DMRYVGRLFV KGISNPMQIL SKLNAMAGYA PDQEIELYEE IKFEPSVMCE IIDKNSTFRS NELVDGDIVC FQKSLTAESR
0801: QQFRYPDVPS FLEYIHSRQV VHFRSLDKPK EQGFCLELSR INTYDEVVGR IARQLKLNDP SKIRLTSHNC LSQQPKPQPI KYRGLDFLVN MLFHNNKISD
0901: ILYYEVLDIP LPEIQGLKPF KVAFHHATKD EVVIHMISLP KQSNVDDVMK NLKTKVELSH PHAELRLLKV FRHKIYKILP TTEKIENIND RYWTLRAEEI
1001: PEEEKNIGPH DRLVHVYHFN KEAAQNQMKI QNFGEPFLLI IREKETLAEL KPRIQKKLQV PDEDFAKWKF AFVTSDCPEY LEDLDILLSR FQQRENVLHA
1101: WEQYLGLEHS DCASKRTHAA HQSLHRREKP LRICD
0101: LPSGWVIHAH FSLSVVNQTQ NDYSIRKETQ HRFCSTASEW GFKPFMSLVE LYDPDKGYLV GDMCTIEAEV AVLSDSEFML YDSIHSKKAT NFVGLKNQGA
0201: TCYLNSLLQT FYHIPYFRKA VYNMPTTEND MPLALQNLFY KLQFSGKSVA TRELTKSFGW DSSDVFMQHD VHELNTVLCE KLEGKMKGTI VEGTIQQLFE
0301: GHNMSYIECI NVDYKSTCTD TFNDIQLLVK GCSDVYASFD KYVEVDYLDG DNKYSSELYG LQDAKKGVLF IDFPPVLQLH LKRFEYDSMR GNDSKINDPY
0401: EFPLQLDLDR ENGKYLSPEA DRTVRNLYTL HSVLAHGGSV TGGHYYAFIR PTLSNQWYKF NDERVTKVDA KRALEDQYGG QGKLPQTNPG YEFQISENSN
0501: AYLLVYIRES DKEKIMCTVE QKDIGEHLRV RYSTSSMSCL FIFAPISHVD LTILMDVFKA RFEIDQEDEE QKKKDESEAN LYTVIKVARD EDIRQQIGKD
0601: IYFDLVDHEK VKCFRIQRET LFSAFKEDIK KEFCVPVQFQ RYWLWAKRQN HTYRPDRPLT RLEESQTVGQ LRKVSSKFHN AELKLFLEVE LGPELMLLSP
0701: PEKANDDILL FFKGYDPEKE DMRYVGRLFV KGISNPMQIL SKLNAMAGYA PDQEIELYEE IKFEPSVMCE IIDKNSTFRS NELVDGDIVC FQKSLTAESR
0801: QQFRYPDVPS FLEYIHSRQV VHFRSLDKPK EQGFCLELSR INTYDEVVGR IARQLKLNDP SKIRLTSHNC LSQQPKPQPI KYRGLDFLVN MLFHNNKISD
0901: ILYYEVLDIP LPEIQGLKPF KVAFHHATKD EVVIHMISLP KQSNVDDVMK NLKTKVELSH PHAELRLLKV FRHKIYKILP TTEKIENIND RYWTLRAEEI
1001: PEEEKNIGPH DRLVHVYHFN KEAAQNQMKI QNFGEPFLLI IREKETLAEL KPRIQKKLQV PDEDFAKWKF AFVTSDCPEY LEDLDILLSR FQQRENVLHA
1101: WEQYLGLEHS DCASKRTHAA HQSLHRREKP LRICD
0001: MTMMTPPPLD QEDEEMLVPN PDLVEGPQPM EVAQTDPAAT AVENPPPEDP PSLKFTWTIP MFTRLNTRKH YSDVFVVGGY KWRILIFPKG NNVDHLSMYL
0101: DVADAANLPY GWSRYSQFSL AVVNQVNNRY SIRKETQHQF NARESDWGFT SFMPLSELYE PTRGYLVNDT VLIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI DFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLQLDLDRE DGRYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDIAEHL RVRLKKEQEE KEDKRKYKAQ AHLFTTIKVA RDDDITEQIG KNIYFDLVDH EKVRSFRIQK
0601: QTPFQQFKEE VAKEFGVPVQ LQRFWIWAKR QNHTYRPNRP LSPNEELQTV GQIREASNKA NNAELKLFLE IERGPDDLPI PPPEKTSEDI LLFFKLYDPE
0701: NAVLRYVGRL MVKSSSKPMD IVGQLNKMAG FAPDEEIELF EEIKFEPCVM CEQIDKKTSF RLCQIEDGDI ICYQKPLSIE ESEFRYPDVP SFLEYVQNRE
0801: LVRFRTLEKP KEDEFTMELS KLHTYDDVVE RVAEKLGLDD PSKLRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHSATK DEVIIHNIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFFHKIYKIF PSTERIENIN DQYWTLRAEE IPEEEKNIGP NDRLIHVYHF
1001: TKEAGQNQQV QNFGEPFFLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF ASFSMGRPDY LLDTDVVYNR FQRRDVYGAW EQYLGLEHID NAPKRAYAAN
1101: QNRHAYEKPV KIYN
0101: DVADAANLPY GWSRYSQFSL AVVNQVNNRY SIRKETQHQF NARESDWGFT SFMPLSELYE PTRGYLVNDT VLIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI DFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLQLDLDRE DGRYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDIAEHL RVRLKKEQEE KEDKRKYKAQ AHLFTTIKVA RDDDITEQIG KNIYFDLVDH EKVRSFRIQK
0601: QTPFQQFKEE VAKEFGVPVQ LQRFWIWAKR QNHTYRPNRP LSPNEELQTV GQIREASNKA NNAELKLFLE IERGPDDLPI PPPEKTSEDI LLFFKLYDPE
0701: NAVLRYVGRL MVKSSSKPMD IVGQLNKMAG FAPDEEIELF EEIKFEPCVM CEQIDKKTSF RLCQIEDGDI ICYQKPLSIE ESEFRYPDVP SFLEYVQNRE
0801: LVRFRTLEKP KEDEFTMELS KLHTYDDVVE RVAEKLGLDD PSKLRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHSATK DEVIIHNIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFFHKIYKIF PSTERIENIN DQYWTLRAEE IPEEEKNIGP NDRLIHVYHF
1001: TKEAGQNQQV QNFGEPFFLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF ASFSMGRPDY LLDTDVVYNR FQRRDVYGAW EQYLGLEHID NAPKRAYAAN
1101: QNRHAYEKPV KIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.