Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67533 | Canola | cytosol, nucleus | 27.69 | 28.12 |
| Os07t0163800-01 | Rice | cytosol, plasma membrane | 40.0 | 26.53 |
| TraesCS2A01G246800.3 | Wheat | golgi | 44.62 | 7.77 |
| Bra009210.1-P | Field mustard | cytosol | 32.82 | 5.82 |
| Bra005900.1-P | Field mustard | cytosol | 32.82 | 5.74 |
| VIT_08s0032g00600.t01 | Wine grape | cytosol | 32.82 | 5.73 |
| AT3G11910.1 | Thale cress | cytosol | 32.31 | 5.65 |
| Bra028727.1-P | Field mustard | cytosol | 32.82 | 5.62 |
| AT5G06600.1 | Thale cress | cytosol | 31.79 | 5.56 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 31.79 | 5.55 |
| Bra034802.1-P | Field mustard | cytosol | 30.77 | 5.38 |
| Bra038685.1-P | Field mustard | cytosol | 30.26 | 5.35 |
| PGSC0003DMT400072539 | Potato | cytosol | 30.77 | 5.35 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 30.77 | 5.35 |
| Bra001426.1-P | Field mustard | cytosol | 29.74 | 5.22 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 27.18 | 4.74 |
| Solyc06g073820.1.1 | Tomato | cytosol | 27.18 | 4.67 |
| TraesCS3A01G295900.7 | Wheat | cytosol | 26.15 | 4.62 |
| TraesCS5A01G060400.1 | Wheat | nucleus | 8.72 | 1.51 |
| TraesCS4A01G038800.2 | Wheat | mitochondrion, nucleus | 6.67 | 1.21 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 7.69 | 1.08 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 8.72 | 1.03 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 6.67 | 0.99 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G176700.1 | EnsemblPlantsGene:TraesCS3A01G176700 | InterPro:USP_C | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF614 | PFAM:PF14533 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:198034565..198037490
Molecular Weight (calculated)
22505.0 Da
IEP (calculated)
7.127
GRAVY (calculated)
-0.441
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVPPPVALP CAHFLPSAAG QVQNFGEPFF MVIREDETLS SIKERLQKKL KVSDEDFSKW KFVYISLGCP DYFEDSDTVA TRFQRYMYRA WAQYLGLEHP
101: DTAPRKAHSA NQDWLLKLLT EPEKFMYSDN NKVHVVRKLK SMYMEVDDCY SRLKGVFLEN GTSEEFSLLL PQLARSKGIV DKAKLKSATS VEDMH
101: DTAPRKAHSA NQDWLLKLLT EPEKFMYSDN NKVHVVRKLK SMYMEVDDCY SRLKGVFLEN GTSEEFSLLL PQLARSKGIV DKAKLKSATS VEDMH
0001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.