Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0489200-01 | Rice | cytosol | 3.41 | 88.37 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 87.0 | 87.0 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 86.73 | 86.73 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 86.64 | 86.64 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 85.65 | 85.57 |
| EES15989 | Sorghum | cytosol | 85.38 | 84.85 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 41.88 | 84.75 |
| TraesCS5A01G105900.1 | Wheat | cytosol | 84.22 | 83.91 |
| TraesCS4D01G165800.1 | Wheat | unclear | 84.13 | 83.82 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 84.13 | 83.75 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 84.39 | 83.5 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 86.19 | 83.49 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 83.59 | 83.44 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 84.22 | 83.32 |
| EES09985 | Sorghum | cytosol | 83.5 | 83.27 |
| Solyc11g006320.1.1 | Tomato | cytosol | 81.79 | 81.65 |
| Zm00001d041035_P002 | Maize | cytosol | 82.15 | 80.42 |
| Solyc05g055090.2.1 | Tomato | cytosol | 80.27 | 79.98 |
| Zm00001d023640_P004 | Maize | cytosol | 79.73 | 78.53 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 77.4 | 77.19 |
| Zm00001d052943_P023 | Maize | plastid | 73.18 | 60.94 |
| GSMUA_Achr6P14230_001 | Banana | cytosol | 10.85 | 55.5 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 16.14 | 16.73 |
| GSMUA_Achr11P... | Banana | nucleus | 15.96 | 16.3 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 15.61 | 12.32 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 4.57 | 11.26 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 10.4 | 8.83 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 5.74 | 7.61 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSMUA_Achr10G14590_001 | EnsemblPlants:GSMUA_Achr10P14590_001 | EnsemblPlants:GSMUA_Achr10T14590_001 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:IPR028889 | UniProt:M0RI85 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 |
| PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 |
| PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 |
| InterPro:TRAF-like | UniParc:UPI00029556A1 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14590_001]
Coordinates
chr10:-:22783623..22806841
Molecular Weight (calculated)
130591.0 Da
IEP (calculated)
5.591
GRAVY (calculated)
-0.650
Length
1115 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMTTPPPLD QEEDELLVPR PEIAEGPQPM EVAQSETTST AENHQVEEPS SSRFTWTIEN FSRLNTKKLY SDMFIVGGYQ WRVLIFPKGN NVDYLSMYLD
0101: VADSASLPYG WSRFAQFSLA VVNQIQSKYS IRKDTQHQFN SRESDWGFTS FMPLSEVYDP SRGFLVNDTI VVEADVAVRR VIDYWSYDSK KETGYVGLKN
0201: QGATCYMNSL LQTLYHIPYF RKAVYHMPTT ENDMPSGSIP LALQSLFYKL QYSDGSVATK DLTKSFGWDT YDSFMQHDVQ ELNRVLCEKL EDKMKGTVVE
0301: GTIQQLFEGH HTNYIECINV DYKSSRKESF YDLQLDVKGC HDVYASFDKF VEVERLEGDN KYHAEQYGLQ DAKKGVLFAD FPPVLQLQLK RFEYDFMRDT
0401: MIKINDRYEF PVQLDLDREN GKYLSPDADR RVRNLYTIHS VLVHSGGVHG GHYYAFIRPN LSDQWYKFDD ERVTKEDTKR AIEEQYGGEE ELPQINPGFN
0501: NTPFKFTKYS NAYMLVYIRE SDKDKIMCNV DEKDIAEHLR IRLKREQEEK EQKKKEKAEA HLYTIIKVAR DKDLMEQIGR DIYFDLVDHD KVCSFRIQKQ
0601: LPFSIFKEEV AREFGIPVHF QRFWLWAKRQ NHTYRPNRPL SPQEEAQSVG QLREISNKAQ NAELKLLLEV ELGPDLHPSP PPEKTKEDIL LFFKLYDPEK
0701: EELRYLGRLF VKGLGKPADI LTKLNEMAGF SPNEEIELFE EIKFEPNVMC ERIDKRLPFR SSQLEDGDII CYQKSPSLGN NEPIRYPDVP SFLEYVRNRQ
0801: VVHFRLLEKP KEDDFCLELS KLDTYDDVVE KVARQLSLND PSKIRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHFTQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHHATK DEVAIHSIRL PKNSIVGDVI NDLKAKVELS HPNAELRLLE VFYHKIYKIF PPSEKIENIN DQYWTLRAEE IPEEEKNLGP QDRLIHVYHF
1001: MKDPNQNQMQ IQNFGEPFLL VIHEGETLAE VKVRIQKKLQ IPDDDFSKWK FAFLSMGRPD YLQDSEIVSN RFQRRDVYGA WEQYLGLEHS DTAPKRAYTA
1101: NQNRHTFDKP VRIYN
0101: VADSASLPYG WSRFAQFSLA VVNQIQSKYS IRKDTQHQFN SRESDWGFTS FMPLSEVYDP SRGFLVNDTI VVEADVAVRR VIDYWSYDSK KETGYVGLKN
0201: QGATCYMNSL LQTLYHIPYF RKAVYHMPTT ENDMPSGSIP LALQSLFYKL QYSDGSVATK DLTKSFGWDT YDSFMQHDVQ ELNRVLCEKL EDKMKGTVVE
0301: GTIQQLFEGH HTNYIECINV DYKSSRKESF YDLQLDVKGC HDVYASFDKF VEVERLEGDN KYHAEQYGLQ DAKKGVLFAD FPPVLQLQLK RFEYDFMRDT
0401: MIKINDRYEF PVQLDLDREN GKYLSPDADR RVRNLYTIHS VLVHSGGVHG GHYYAFIRPN LSDQWYKFDD ERVTKEDTKR AIEEQYGGEE ELPQINPGFN
0501: NTPFKFTKYS NAYMLVYIRE SDKDKIMCNV DEKDIAEHLR IRLKREQEEK EQKKKEKAEA HLYTIIKVAR DKDLMEQIGR DIYFDLVDHD KVCSFRIQKQ
0601: LPFSIFKEEV AREFGIPVHF QRFWLWAKRQ NHTYRPNRPL SPQEEAQSVG QLREISNKAQ NAELKLLLEV ELGPDLHPSP PPEKTKEDIL LFFKLYDPEK
0701: EELRYLGRLF VKGLGKPADI LTKLNEMAGF SPNEEIELFE EIKFEPNVMC ERIDKRLPFR SSQLEDGDII CYQKSPSLGN NEPIRYPDVP SFLEYVRNRQ
0801: VVHFRLLEKP KEDDFCLELS KLDTYDDVVE KVARQLSLND PSKIRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHFTQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHHATK DEVAIHSIRL PKNSIVGDVI NDLKAKVELS HPNAELRLLE VFYHKIYKIF PPSEKIENIN DQYWTLRAEE IPEEEKNLGP QDRLIHVYHF
1001: MKDPNQNQMQ IQNFGEPFLL VIHEGETLAE VKVRIQKKLQ IPDDDFSKWK FAFLSMGRPD YLQDSEIVSN RFQRRDVYGA WEQYLGLEHS DTAPKRAYTA
1101: NQNRHTFDKP VRIYN
0001: MTMMTPPPLD QEDEEMLVPN PDLVEGPQPM EVAQTDPAAT AVENPPPEDP PSLKFTWTIP MFTRLNTRKH YSDVFVVGGY KWRILIFPKG NNVDHLSMYL
0101: DVADAANLPY GWSRYSQFSL AVVNQVNNRY SIRKETQHQF NARESDWGFT SFMPLSELYE PTRGYLVNDT VLIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI DFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLQLDLDRE DGRYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDIAEHL RVRLKKEQEE KEDKRKYKAQ AHLFTTIKVA RDDDITEQIG KNIYFDLVDH EKVRSFRIQK
0601: QTPFQQFKEE VAKEFGVPVQ LQRFWIWAKR QNHTYRPNRP LSPNEELQTV GQIREASNKA NNAELKLFLE IERGPDDLPI PPPEKTSEDI LLFFKLYDPE
0701: NAVLRYVGRL MVKSSSKPMD IVGQLNKMAG FAPDEEIELF EEIKFEPCVM CEQIDKKTSF RLCQIEDGDI ICYQKPLSIE ESEFRYPDVP SFLEYVQNRE
0801: LVRFRTLEKP KEDEFTMELS KLHTYDDVVE RVAEKLGLDD PSKLRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHSATK DEVIIHNIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFFHKIYKIF PSTERIENIN DQYWTLRAEE IPEEEKNIGP NDRLIHVYHF
1001: TKEAGQNQQV QNFGEPFFLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF ASFSMGRPDY LLDTDVVYNR FQRRDVYGAW EQYLGLEHID NAPKRAYAAN
1101: QNRHAYEKPV KIYN
0101: DVADAANLPY GWSRYSQFSL AVVNQVNNRY SIRKETQHQF NARESDWGFT SFMPLSELYE PTRGYLVNDT VLIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYASFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI DFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLQLDLDRE DGRYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESDKDKIICN VDEKDIAEHL RVRLKKEQEE KEDKRKYKAQ AHLFTTIKVA RDDDITEQIG KNIYFDLVDH EKVRSFRIQK
0601: QTPFQQFKEE VAKEFGVPVQ LQRFWIWAKR QNHTYRPNRP LSPNEELQTV GQIREASNKA NNAELKLFLE IERGPDDLPI PPPEKTSEDI LLFFKLYDPE
0701: NAVLRYVGRL MVKSSSKPMD IVGQLNKMAG FAPDEEIELF EEIKFEPCVM CEQIDKKTSF RLCQIEDGDI ICYQKPLSIE ESEFRYPDVP SFLEYVQNRE
0801: LVRFRTLEKP KEDEFTMELS KLHTYDDVVE RVAEKLGLDD PSKLRLTSHN CYSQQPKPQP IKYRGVDHLS DMLVHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHSATK DEVIIHNIRL PKQSTVGDVI NELKTKVELS HQDAELRLLE VFFHKIYKIF PSTERIENIN DQYWTLRAEE IPEEEKNIGP NDRLIHVYHF
1001: TKEAGQNQQV QNFGEPFFLV IHEGETLEEI KTRIQKKLHV PDEDFAKWKF ASFSMGRPDY LLDTDVVYNR FQRRDVYGAW EQYLGLEHID NAPKRAYAAN
1101: QNRHAYEKPV KIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.