Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G105900.1 | Wheat | cytosol | 98.48 | 98.57 |
| TraesCS5B01G111000.7 | Wheat | cytosol | 98.66 | 98.05 |
| TraesCS5D01G123300.4 | Wheat | cytosol | 98.57 | 97.96 |
| Os12t0489200-01 | Rice | cytosol | 3.75 | 97.67 |
| EES15989 | Sorghum | cytosol | 93.21 | 93.05 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 45.71 | 92.92 |
| EES09985 | Sorghum | cytosol | 88.3 | 88.46 |
| Zm00001d041035_P002 | Maize | cytosol | 88.57 | 87.09 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 85.89 | 86.28 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 85.45 | 85.83 |
| Zm00001d023640_P004 | Maize | cytosol | 86.25 | 85.34 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 84.38 | 84.75 |
| GSMUA_Achr10P... | Banana | cytosol | 83.75 | 84.13 |
| HORVU0Hr1G030140.1 | Barley | mitochondrion | 14.02 | 83.96 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 83.57 | 83.87 |
| HORVU4Hr1G034950.2 | Barley | cytosol | 82.59 | 82.74 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 84.91 | 82.62 |
| Solyc11g006320.1.1 | Tomato | cytosol | 80.09 | 80.3 |
| Solyc05g055090.2.1 | Tomato | cytosol | 79.2 | 79.27 |
| HORVU2Hr1G058700.4 | Barley | cytosol | 78.48 | 78.76 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 23.84 | 72.55 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 43.75 | 63.72 |
| Zm00001d052943_P023 | Maize | plastid | 76.07 | 63.63 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 14.29 | 17.56 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 14.82 | 14.78 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 14.55 | 11.92 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 14.38 | 11.2 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 15.54 | 10.41 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | UniProt:A0A287QT94 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:HORVU5Hr1G031980 | EnsemblPlants:HORVU5Hr1G031980.4 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom | PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 |
| PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 |
| PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 |
| InterPro:TRAF-like | UniParc:UPI000B4850F3 | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:205895866..205923541
Molecular Weight (calculated)
131430.0 Da
IEP (calculated)
5.834
GRAVY (calculated)
-0.690
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTMMTPSPLE QQEEDEEMLV AHQELSAADS AQPMEVVVQT EPANTAESQA PEDPQTSRFT WTIENFTRLS GKKHYSDMFV VGGFKWRVLI FPKGNNVDHL
0101: SMYLDVADSG NLPYGWSRYA QFSLAIVNQI HQKYTARKDT QHQFNARESD WGFTSFMPLS ELYDPSRGYL VNDTVVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HMPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVER LEGDNKYQAE QHGLQDARKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDKDDGKYLT PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLSDQW YKFDDERVTK EDTKKALEEQ YGGEEELPQV
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQEEKEHKKK EKAEAHLYTI IKVARDEDLK EQIGKNIYFD LVDHEKVRNF
0601: RIQKQLPFNS FKEEVAKEYG IPVQSQRFWL WAKRQNHTYR PNRPLSPHEE AQSVGQLREV SNKAHNAELK LFLEVELGLD LRPIRPPEKS KEDILLFFKL
0701: YNPEKEELRF VGRLFVKALG KPSDILTKLN EMAGFSPNEE IELYEEIKFE PNVMCEHIDK KLSFRSSQLE DGDIISFQKP SIPGGDTQVR YKDVPSFLEY
0801: VHNRQVVHFR CLEKPKEEEF CLELSKLHTY DDVVERVARQ LGLDDPSKIR LTSHNCYSQQ PKPQPIRYRG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QCLKTLKVAF HHATKDEVVI HSIRLSKNST ISDVITDLKT KVVELSNPDA ELRLLEVFYH KIYKIFPPHE KIENINDQYW TLRAEEIPEE EKNLTAQDRL
1001: IHVYHFMKDP NQNQQIQNFG DPFLLVIREG ETAAEVMDRV QKKLRVPNEE FAKWKAAFIS MNRPEYLQDI DAVSARFQRR DVYGAWEQYL GLEHTDTTPK
1101: RSYTANQNRH TYEKPVKIYN
0101: SMYLDVADSG NLPYGWSRYA QFSLAIVNQI HQKYTARKDT QHQFNARESD WGFTSFMPLS ELYDPSRGYL VNDTVVVEAE VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HMPYFRKAVY HMPTTENDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVER LEGDNKYQAE QHGLQDARKG VLFLDFPPVL QLQLKRFEYD
0401: YMRDTMVKIN DRYEFPLQLD LDKDDGKYLT PDADRSIRNL YTLHSVLVHS GGVHGGHYYA FIRPTLSDQW YKFDDERVTK EDTKKALEEQ YGGEEELPQV
0501: NPGFNNTPFK FTKYSNAYML VYIRESDKEK IMCNVDEKDI AEHLRIRLKK EQEEKEHKKK EKAEAHLYTI IKVARDEDLK EQIGKNIYFD LVDHEKVRNF
0601: RIQKQLPFNS FKEEVAKEYG IPVQSQRFWL WAKRQNHTYR PNRPLSPHEE AQSVGQLREV SNKAHNAELK LFLEVELGLD LRPIRPPEKS KEDILLFFKL
0701: YNPEKEELRF VGRLFVKALG KPSDILTKLN EMAGFSPNEE IELYEEIKFE PNVMCEHIDK KLSFRSSQLE DGDIISFQKP SIPGGDTQVR YKDVPSFLEY
0801: VHNRQVVHFR CLEKPKEEEF CLELSKLHTY DDVVERVARQ LGLDDPSKIR LTSHNCYSQQ PKPQPIRYRG VEHLLDMLVH YNQTSDILYY EVLDIPLPEL
0901: QCLKTLKVAF HHATKDEVVI HSIRLSKNST ISDVITDLKT KVVELSNPDA ELRLLEVFYH KIYKIFPPHE KIENINDQYW TLRAEEIPEE EKNLTAQDRL
1001: IHVYHFMKDP NQNQQIQNFG DPFLLVIREG ETAAEVMDRV QKKLRVPNEE FAKWKAAFIS MNRPEYLQDI DAVSARFQRR DVYGAWEQYL GLEHTDTTPK
1101: RSYTANQNRH TYEKPVKIYN
0001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
0101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
0201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
0301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
0401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
0501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
0601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
0701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
0801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
0901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEIPEEEKNI GPNDRLILVY
1001: HFAKETGQNQ QVQNFGEPFF LVIHEGETLE EIKNRIQKKL HVSDEDFAKW KFAFMSMGRP EYLQDTDVVY NRFQRRDVYG AFEQYLGLEH ADTTPKRAYA
1101: ANQNRHAYEK PVKIYN
Arabidopsis Description
UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.