Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G165800.1 | Wheat | unclear | 90.61 | 90.53 |
| TraesCS4A01G163000.1 | Wheat | cytosol | 89.98 | 90.06 |
| Os12t0489100-01 | Rice | cytosol, extracellular, plasma membrane | 43.11 | 87.48 |
| HORVU0Hr1G030140.1 | Barley | mitochondrion | 14.04 | 83.96 |
| EES09985 | Sorghum | cytosol | 82.92 | 82.92 |
| HORVU5Hr1G031980.4 | Barley | cytosol | 82.74 | 82.59 |
| EES15989 | Sorghum | cytosol | 82.65 | 82.35 |
| Zm00001d041035_P002 | Maize | cytosol | 81.84 | 80.33 |
| GSMUA_Achr5P02720_001 | Banana | cytosol | 78.09 | 78.3 |
| VIT_13s0073g00610.t01 | Wine grape | cytosol | 78.09 | 78.3 |
| VIT_06s0009g00960.t01 | Wine grape | cytosol | 77.82 | 77.96 |
| GSMUA_Achr4P28400_001 | Banana | cytosol | 77.55 | 77.76 |
| GSMUA_Achr10P... | Banana | cytosol | 77.19 | 77.4 |
| Zm00001d023640_P004 | Maize | cytosol | 76.92 | 75.97 |
| GSMUA_Achr4P22710_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.57 | 74.37 |
| HORVU2Hr1G058700.4 | Barley | cytosol | 73.79 | 73.92 |
| Solyc11g006320.1.1 | Tomato | cytosol | 73.79 | 73.86 |
| Solyc05g055090.2.1 | Tomato | cytosol | 73.26 | 73.19 |
| HORVU3Hr1G075250.1 | Barley | cytosol | 23.17 | 70.38 |
| Zm00001d052943_P023 | Maize | plastid | 71.47 | 59.67 |
| HORVU3Hr1G075220.5 | Barley | endoplasmic reticulum | 39.18 | 56.96 |
| HORVU4Hr1G071690.9 | Barley | nucleus | 14.67 | 18.0 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 13.33 | 13.27 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 14.31 | 11.7 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 13.51 | 10.5 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 14.58 | 9.75 |
| Os12t0489200-01 | Rice | cytosol | 0.27 | 6.98 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | UniProt:A0A287NSS4 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:HORVU4Hr1G034950 | EnsemblPlants:HORVU4Hr1G034950.2 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom |
| PFAM:PF00443 | PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50144 | PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF577 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SMART:SM00061 | SUPFAM:SSF49599 | SUPFAM:SSF54001 | TMHMM:TMhelix | InterPro:TRAF-like | UniParc:UPI000B46BEF1 |
| InterPro:USP7_ICP0-binding_dom | InterPro:USP_C | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
No Description!
Coordinates
chrchr4H:-:253830815..253894456
Molecular Weight (calculated)
126216.0 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.496
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: RLVVASPTSQ QANDELLVPH QGLATAAGDT AQPMEVVAQT EAASTAESQP SEDPQTSRFS WTIASFTRLN GKKHYSDVFV VGGYKWRVLI FPKGNNVEHL
0101: SMYLDIADSA NLPYGWSRSA QFSLSVVNQI DQKYTTQKDT QHQFSARESD WGFTSFMPLS ELYDPSRGYL VNDTIVVEAQ VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTETDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVEC LEGDNKYHAE NHGLQDAKKG ALFLDFPPVL QLQLKRFEYD
0401: HMRDTMVKIN DRYEFPLQLD LDRDDGKYLA PDADRSIRNL YTLHSVLVHS GRVHGGHYYA FIRPTLANQW YKFDDERVTK EDTEKAFEEQ YGGVEELPQI
0501: NPGFNNTPFK FTKYSNAYML VYIRESDTEK IMCNVDEKDI AEHLRIRLKK EREEKEHKKK EKAEAHLYTI IKIARDEDLK EQTGKDIYFD LVDHEKVRSF
0601: RIQKQLPFST FKEEVAKEYG IPVQFQRFWL WAKRQNHTYR PNRPLNPHEE TQSVGQLREI SNKAQNAELK LFLEVEFGLD LQPLPPPEKS KEDILLFFKL
0701: YNPEKEVLCF VGRLFVKALG KPSDILRKLT EMAGFTPDEE IELYEEIKFE PNVMCEHIDK KLTFRASQLE DGDIVCFQKS PKADSGTQVR YPDVPSFLEY
0801: VHNRQVVHFR SLEKPKDIEF CLELSKLHTY DDVVERVARQ LGLDDPAKIR LTSHNCYSQQ PKPQHIRYQG VEHLLEMLIH YNQTSDILYY EVLDIPLPEL
0901: QFLKTLKVAF HHATKEEVVI HSIRLSKNST IADVIIDLKT KVDLSSPTAE LRVLEVFYHK IYKIFPLHEK IENINDQYWT LRAEEVPEEE RNPSQDDRLI
1001: HVYHFVKDPL QNQQIQNFGD PFFLAIHEGE TLAEVKGRIQ RKLQVPDEEF XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXISSISS LPLLYRVVFL
1101: SSVFLIVLLI IRSFACLV
0101: SMYLDIADSA NLPYGWSRSA QFSLSVVNQI DQKYTTQKDT QHQFSARESD WGFTSFMPLS ELYDPSRGYL VNDTIVVEAQ VAVRKMVDYW TYDSKKETGY
0201: VGLKNQGATC YMNSLLQTLY HIPYFRKAVY HMPTTETDMP SGSIPLALQS LFYKLQYSDN SVATKELTKS FGWDTYDSFM QHDVQELNRV LCEKLEDKMK
0301: GTVVEGTIEQ LFEGHHINYI ECINVDYKSN RKESFYDLQL DVKGCRDVYA SFDKYVEVEC LEGDNKYHAE NHGLQDAKKG ALFLDFPPVL QLQLKRFEYD
0401: HMRDTMVKIN DRYEFPLQLD LDRDDGKYLA PDADRSIRNL YTLHSVLVHS GRVHGGHYYA FIRPTLANQW YKFDDERVTK EDTEKAFEEQ YGGVEELPQI
0501: NPGFNNTPFK FTKYSNAYML VYIRESDTEK IMCNVDEKDI AEHLRIRLKK EREEKEHKKK EKAEAHLYTI IKIARDEDLK EQTGKDIYFD LVDHEKVRSF
0601: RIQKQLPFST FKEEVAKEYG IPVQFQRFWL WAKRQNHTYR PNRPLNPHEE TQSVGQLREI SNKAQNAELK LFLEVEFGLD LQPLPPPEKS KEDILLFFKL
0701: YNPEKEVLCF VGRLFVKALG KPSDILRKLT EMAGFTPDEE IELYEEIKFE PNVMCEHIDK KLTFRASQLE DGDIVCFQKS PKADSGTQVR YPDVPSFLEY
0801: VHNRQVVHFR SLEKPKDIEF CLELSKLHTY DDVVERVARQ LGLDDPAKIR LTSHNCYSQQ PKPQHIRYQG VEHLLEMLIH YNQTSDILYY EVLDIPLPEL
0901: QFLKTLKVAF HHATKEEVVI HSIRLSKNST IADVIIDLKT KVDLSSPTAE LRVLEVFYHK IYKIFPLHEK IENINDQYWT LRAEEVPEEE RNPSQDDRLI
1001: HVYHFVKDPL QNQQIQNFGD PFFLAIHEGE TLAEVKGRIQ RKLQVPDEEF XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXISSISS LPLLYRVVFL
1101: SSVFLIVLLI IRSFACLV
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.