CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89898	Soybean	cytosol	82.39	96.56
KRH33457	Soybean	cytosol	29.35	89.04
Os11t0573000-01	Rice	cytosol, plasma membrane	54.63	83.45
HORVU3Hr1G075250.1	Barley	cytosol	60.5	72.83
KRG90150	Soybean	cytosol	19.19	40.09
KRH14719	Soybean	nucleus	94.58	37.48
KRH73403	Soybean	nucleus	94.36	37.39
KRG98484	Soybean	cytosol	8.58	34.23
KRG90152	Soybean	cytosol	58.24	32.91
Os01t0771400-00	Rice	plasma membrane	71.78	31.18
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.68	30.94
Zm00001d043312_P001	Maize	nucleus	76.07	30.17
KXG33467	Sorghum	nucleus	76.07	30.14
TraesCS3D01G307100.1	Wheat	cytosol	74.04	29.71
TraesCS3B01G341000.1	Wheat	cytosol	74.04	29.71
TraesCS3A01G295900.7	Wheat	cytosol	73.81	29.62
KRH71763	Soybean	cytosol	16.25	27.8
KRH32941	Soybean	cytosol	15.12	23.34
KRH68070	Soybean	cytosol	17.16	20.16
KRG96333	Soybean	cytosol	18.51	20.0
KRH46376	Soybean	cytosol	15.12	19.88
KRG96335	Soybean	cytosol	16.48	19.26
KRG96334	Soybean	cytosol	14.67	18.68
KRH71764	Soybean	cytosol	14.67	18.06
KRH32747	Soybean	cytosol	14.22	17.21
KRH71762	Soybean	cytosol	6.09	14.21
KRG98483	Soybean	cytosol	6.55	11.69
KRG89895	Soybean	nucleus	15.35	9.08
KRH31732	Soybean	nucleus	22.35	8.69
KRG92287	Soybean	nucleus	22.12	8.6
KRH34524	Soybean	nucleus	21.9	8.5
HORVU3Hr1G075220.5	Barley	endoplasmic reticulum	14.67	8.45
KRH61745	Soybean	nucleus	18.06	8.17
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	22.35	8.06
KRH16103	Soybean	nucleus	17.83	7.31
KRH52561	Soybean	cytosol	18.28	7.25
KRH04994	Soybean	nucleus	17.61	7.22
KRH61900	Soybean	cytosol, mitochondrion, nucleus	17.83	7.21
KRH52412	Soybean	nucleus	18.28	4.82
KRH17931	Soybean	mitochondrion, nucleus	0.68	0.44
KRH61744	Soybean	cytosol	0.0	0.0
KRG90154	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:14.6.2.3	MapMan:19.2.3.1.1.5	Gene3D:2.60.210.10	Gene3D:3.90.70.10	UniProt:A0A0R0GRJ6	EMBL:ACUP02007988
EnsemblPlantsGene:GLYMA_13G027600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR002083	InterPro:IPR008974	InterPro:IPR028889
EnsemblPlants:KRH17929	ProteinID:KRH17929	ProteinID:KRH17929.1	InterPro:MATH/TRAF_dom	PFAM:PF00443	PFAM:PF00917
ScanProsite:PS00972	PFscan:PS50144	PFscan:PS50235	PANTHER:PTHR24006	PANTHER:PTHR24006:SF614	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SMART:SM00061	SUPFAM:SSF49599	SUPFAM:SSF54001	InterPro:TRAF-like	UniParc:UPI00054A1ECB
InterPro:USP_CS	InterPro:USP_dom	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:6775315..6790958

Molecular Weight (calculated)

51728.0 Da

IEP (calculated)

4.851

GRAVY (calculated)

-0.561

Length

443 amino acids

Sequence
(BLAST)

001: MTVMMPAPID QQEDEDVLVP DADLPENNHQ PMEVVAQPEN ANTVESQPVE DPPSSRFTWR IDNFSRLNTK KLYSEIFVVG GYKWRVLIFP KGNNVDYLSM
101: YLDVADSASL PYGWSRYAQF SLAVVNQMHN KYSVRKDTQH QFNARESDWG FTSFMPLGEL YDPSRGYLVH DTLIVEAEVL VRRIVDYWTY DSKKETGYVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDMPTG SIPLALQSLF YKLQYSDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
301: VVEGTIQKLF EGHHMNYIEC INVDYKSTRK ESFYDLQLDV KGCRDVYASF DKYVEVESLE GDNKYHAEQY GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
401: RDTMVKINDR YEFPLQLDLD REDGKYLSPD ADRSVRNLYT LHR

Best Arabidopsis Sequence Match ( AT3G11910.1 )
(BLAST)

0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.