CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98483	Soybean	cytosol	64.39	87.5
KRH71762	Soybean	cytosol	36.8	65.26
KRH32941	Soybean	cytosol	54.01	63.41
KRH71763	Soybean	cytosol	48.37	62.93
KRG98484	Soybean	cytosol	20.47	62.16
KRG96334	Soybean	cytosol	42.14	40.8
KRG96333	Soybean	cytosol	47.77	39.27
KRH71764	Soybean	cytosol	41.84	39.17
KRH68070	Soybean	cytosol	43.62	38.99
KRH32747	Soybean	cytosol	42.14	38.8
KRG96335	Soybean	cytosol	43.32	38.52
KRG89898	Soybean	cytosol	19.58	17.46
KRG90150	Soybean	cytosol	10.09	16.04
KRH17929	Soybean	cytosol	19.88	15.12
CDY68000	Canola	nucleus	3.86	12.26
KRH14719	Soybean	nucleus	31.16	9.39
KRH73403	Soybean	nucleus	30.86	9.3
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.86	9.11
KRG90152	Soybean	cytosol	14.54	6.25
KRH31732	Soybean	nucleus	20.18	5.97
KRG92287	Soybean	nucleus	20.18	5.96
KRH17931	Soybean	mitochondrion, nucleus	11.87	5.91
KRH34524	Soybean	nucleus	19.88	5.87
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	20.77	5.7
KRG89895	Soybean	nucleus	11.57	5.21
KRH61745	Soybean	nucleus	14.54	5.01
KRH52412	Soybean	nucleus	20.18	4.05
KRH16103	Soybean	nucleus	11.57	3.61
KRH04994	Soybean	nucleus	11.28	3.52
KRG90154	Soybean	cytosol	1.78	3.31
KRH61900	Soybean	cytosol, mitochondrion, nucleus	10.09	3.1
KRH61744	Soybean	cytosol	5.64	2.96
KRH52561	Soybean	cytosol	9.5	2.86
KRH33457	Soybean	cytosol	0.89	2.05

Protein Annotations

EntrezGene:100783403	Gene3D:2.60.210.10	MapMan:35.1	EMBL:ACUP02005341	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G329800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	UniProt:K7LAC2
EnsemblPlants:KRH46376	ProteinID:KRH46376	ProteinID:KRH46376.1	InterPro:MATH/TRAF_dom	PFAM:PF00917	PFscan:PS50144
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI000295CE17

Description

hypothetical protein

Coordinates

chr8:+:44751791..44754008

Molecular Weight (calculated)

38893.7 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.403

Length

337 amino acids

Sequence
(BLAST)

001: MKNKNGKLKL TFEKFTWTIS NFSKLDSKKL YSEKKILAYP KGTDVGYLSI YLDAGVVNLP FGWSKFANFK FALINQANDK MTKIKETTKQ FNATEIAWGF
101: PKFIHLDELN DSSSGFMVND TCIIEVQILV SKSEQENQVD QQVNKIDDNH DIDKPIKHTD IFLPKETFPT SFGELVDFQG LGKIEQAFVP LLEEVFSRHP
201: SLIDCQQKRS GRFVEWAFTA LGRVLHFLKT KKVKDMDGDA CNNLQIFWEE LKMFRFDLTW LEPHVQSALA MKTCIERAVR VKRTREDVTA LEMETKRLKA
301: KMIQAEVDLE IARRDFVKAK EGFEECDLDA ELGYGEP

Best Arabidopsis Sequence Match ( AT5G06600.3 )
(BLAST)

001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEVYY

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.