CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71764	Soybean	cytosol	91.8	93.33
KRG96334	Soybean	cytosol	57.38	60.34
KRH68070	Soybean	cytosol	61.75	59.95
KRG96335	Soybean	cytosol	60.38	58.31
KRG98483	Soybean	cytosol	29.23	43.15
KRH46376	Soybean	cytosol	38.8	42.14
KRG96333	Soybean	cytosol	46.72	41.71
KRH32941	Soybean	cytosol	30.6	39.02
KRH71763	Soybean	cytosol	27.05	38.22
KRG98484	Soybean	cytosol	11.48	37.84
KRH71762	Soybean	cytosol	18.03	34.74
KRG90150	Soybean	cytosol	10.38	17.92
CDY68000	Canola	nucleus	4.64	16.04
KRG89898	Soybean	cytosol	15.85	15.34
KRH17929	Soybean	cytosol	17.21	14.22
KRH14719	Soybean	nucleus	27.6	9.03
KRH73403	Soybean	nucleus	27.32	8.94
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.78	8.59
KRG92287	Soybean	nucleus	19.67	6.32
KRH34524	Soybean	nucleus	19.67	6.31
KRG90152	Soybean	cytosol	13.39	6.25
KRH31732	Soybean	nucleus	18.85	6.06
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	19.4	5.78
KRH61745	Soybean	nucleus	14.75	5.52
KRH17931	Soybean	mitochondrion, nucleus	9.56	5.17
KRG89895	Soybean	nucleus	10.38	5.07
KRH52412	Soybean	nucleus	19.95	4.35
KRH33457	Soybean	cytosol	1.64	4.11
KRH61744	Soybean	cytosol	4.92	2.81
KRH61900	Soybean	cytosol, mitochondrion, nucleus	7.92	2.65
KRH16103	Soybean	nucleus	7.65	2.59
KRH52561	Soybean	cytosol	7.65	2.51
KRH04994	Soybean	nucleus	7.38	2.5
KRG90154	Soybean	cytosol	0.55	1.1

Protein Annotations

EntrezGene:102664684	Gene3D:2.60.210.10	MapMan:35.1	EMBL:ACUP02006157	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G072500
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	UniProt:K7LI65
EnsemblPlants:KRH32747	ProteinID:KRH32747	ProteinID:KRH32747.1	InterPro:MATH/TRAF_dom	PFAM:PF00917	PFscan:PS50144
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI0002952B11

Description

hypothetical protein

Coordinates

chr10:+:7370397..7372669

Molecular Weight (calculated)

42194.6 Da

IEP (calculated)

8.818

GRAVY (calculated)

-0.384

Length

366 amino acids

Sequence
(BLAST)

001: MVNELTTSVD FEKFSWKIED FSKQNVMKLR SKPFKIRGCT WRILVYPLRR DVNHFSVYLM VADSLPPYGW SRNTFFKLAL INQVDRSKSI AKETRQKFNG
101: GYRCWGSFFL NLSDFNNPKQ GYLVRNKCII EAHICVSDLS PKIQVHPNSS PIFHDSLRCG QATESSSDDR DTISPRTSGS STGAEGETHH QGLNINLILR
201: EVLVDFESLG AEEEAFIPLL EEVCIWHPNL IQCQRERTRR FRQWAFTSLG HVLHFLKTKR VKDINEEDIK YLHGLWKELV KSSGFDLTWL EPYVQSALGL
301: RAYMERANQL KKLKDKVVAL EINMKRLRGE LAAAEGEFEV ARSGLSEVRR GFNEMDVNAA IGYAMF

Best Arabidopsis Sequence Match ( AT5G06600.3 )
(BLAST)

001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEVYY

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.