CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98483	Soybean	cytosol	64.21	49.19
KRH46376	Soybean	cytosol	65.26	36.8
KRH32941	Soybean	cytosol	54.74	36.24
KRH71763	Soybean	cytosol	48.95	35.91
KRG96334	Soybean	cytosol	36.32	19.83
KRG96333	Soybean	cytosol	42.63	19.76
KRH68070	Soybean	cytosol	38.42	19.36
KRH71764	Soybean	cytosol	35.26	18.61
KRG96335	Soybean	cytosol	36.84	18.47
KRH32747	Soybean	cytosol	34.74	18.03
KRG89898	Soybean	cytosol	14.74	7.41
KRH17929	Soybean	cytosol	14.21	6.09
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.53	5.08
KRH14719	Soybean	nucleus	29.47	5.01
KRH73403	Soybean	nucleus	29.47	5.01
KRG90152	Soybean	cytosol	20.0	4.85
KRH17931	Soybean	mitochondrion, nucleus	14.74	4.14
KRG90154	Soybean	cytosol	3.68	3.87
KRG89895	Soybean	nucleus	14.21	3.6
KRH33457	Soybean	cytosol	2.11	2.74
KRH61745	Soybean	nucleus	13.68	2.66
KRG92287	Soybean	nucleus	13.16	2.19
KRH34524	Soybean	nucleus	13.16	2.19
KRH52412	Soybean	nucleus	18.95	2.14
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	13.16	2.04
KRH31732	Soybean	nucleus	12.11	2.02
KRH16103	Soybean	nucleus	10.0	1.76
KRH04994	Soybean	nucleus	9.47	1.67
KRH61900	Soybean	cytosol, mitochondrion, nucleus	9.47	1.64
KRH61744	Soybean	cytosol	5.26	1.56
KRH52561	Soybean	cytosol	8.95	1.52
KRG98484	Soybean	cytosol	0.53	0.9
CDY68000	Canola	nucleus	0.0	0.0
KRG90150	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02001068	EnsemblPlants:KRH71762	EnsemblPlantsGene:GLYMA_02G167400	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR24007
PANTHER:PTHR24007:SF12	PFscan:PS50144	ProteinID:KRH71762	ProteinID:KRH71762.1	SUPFAM:SSF49599	UniParc:UPI00029512A4
UniProt:K7K8X9	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:25715056..25715803

Molecular Weight (calculated)

21984.4 Da

IEP (calculated)

4.465

GRAVY (calculated)

-0.204

Length

190 amino acids

Sequence
(BLAST)

001: MNLLESSLQF NAREYDRGYI SFISLNELCD PSNGFIVNDT CIIQVEILVG NSEHLNQPVI KIDYDKPIEH TADPLPKKMF TTSHDELVDF RGLGKIEKAF
101: VPLIEEVWKG TGMFIEYAFR ALGRVLHFLK NKKIKDMDID ACNHLQILWD ELLEQFRFDL IWLELHQDLV KAEEGIEERN LDAELGYGAP

Best Arabidopsis Sequence Match ( AT5G06600.2 )
(BLAST)

0001: MTMMTPPPVD PEDEEMLVPN SDLVDGPAQP MEVTQPETAA STVENQPAED PPTLKFTWTI PNFSRQNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.